data_6TUY # _model_server_result.job_id ETXIwATuSCCiQb9zUUr3cw _model_server_result.datetime_utc '2024-10-10 06:28:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6tuy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":902}' # _entry.id 6TUY # _exptl.entry_id 6TUY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 528.688 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}2-[3-(dimethylamino)propyl]-6,7-dimethoxy-~{N}4-[1-(naphthalen-2-ylmethyl)piperidin-4-yl]quinazoline-2,4-diamine _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6TUY _cell.length_a 121.578 _cell.length_b 176.862 _cell.length_c 233.495 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6TUY _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N # _chem_comp.formula 'C31 H40 N6 O2' _chem_comp.formula_weight 528.688 _chem_comp.id NY8 _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}2-[3-(dimethylamino)propyl]-6,7-dimethoxy-~{N}4-[1-(naphthalen-2-ylmethyl)piperidin-4-yl]quinazoline-2,4-diamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAS CAP NY8 sing 350 n n CAS NBM NY8 sing 351 n n CAG CAJ NY8 doub 352 n y CAG CBB NY8 sing 353 n y CAU NBM NY8 sing 354 n n CAU CBB NY8 sing 355 n n CAJ CBG NY8 sing 356 n y CAP CBK NY8 sing 357 n n NBM CAT NY8 sing 358 n n CBB CAK NY8 doub 359 n y CAB OBA NY8 sing 360 n n CBK NAY NY8 sing 361 n n CBK CAQ NY8 sing 362 n n CBG CAH NY8 doub 363 n y CBG CBH NY8 sing 364 n y CAT CAQ NY8 sing 365 n n CAH CAE NY8 sing 366 n y CAK CBH NY8 sing 367 n y NAY C6 NY8 sing 368 n n CBH CAI NY8 doub 369 n y OBA CBE NY8 sing 370 n n CAM CBE NY8 doub 371 n y CAM C5 NY8 sing 372 n y CAE CAF NY8 doub 373 n y CBE CBD NY8 sing 374 n y C6 C5 NY8 sing 375 n y C6 N1 NY8 doub 376 n y CAI CAF NY8 sing 377 n y C5 C4 NY8 doub 378 n y N1 C2 NY8 sing 379 n y CBD OAZ NY8 sing 380 n n CBD CAL NY8 doub 381 n y C4 CAL NY8 sing 382 n y C4 N3 NY8 sing 383 n y OAZ CAA NY8 sing 384 n n C2 N3 NY8 doub 385 n y C2 NAX NY8 sing 386 n n CAO NAX NY8 sing 387 n n CAO CAN NY8 sing 388 n n CAN CAR NY8 sing 389 n n CAR NBL NY8 sing 390 n n CAD NBL NY8 sing 391 n n CAC NBL NY8 sing 392 n n CAC H1 NY8 sing 393 n n CAC H2 NY8 sing 394 n n CAC H3 NY8 sing 395 n n CAD H5 NY8 sing 396 n n CAD H6 NY8 sing 397 n n CAD H7 NY8 sing 398 n n CAR H8 NY8 sing 399 n n CAR H9 NY8 sing 400 n n CAN H10 NY8 sing 401 n n CAN H11 NY8 sing 402 n n CAO H12 NY8 sing 403 n n CAO H13 NY8 sing 404 n n NAX H14 NY8 sing 405 n n CAL H15 NY8 sing 406 n n CAA H16 NY8 sing 407 n n CAA H17 NY8 sing 408 n n CAA H18 NY8 sing 409 n n CAB H19 NY8 sing 410 n n CAB H20 NY8 sing 411 n n CAB H21 NY8 sing 412 n n CAM H22 NY8 sing 413 n n NAY H23 NY8 sing 414 n n CBK H24 NY8 sing 415 n n CAQ H25 NY8 sing 416 n n CAQ H26 NY8 sing 417 n n CAT H27 NY8 sing 418 n n CAT H28 NY8 sing 419 n n CAP H29 NY8 sing 420 n n CAP H30 NY8 sing 421 n n CAS H31 NY8 sing 422 n n CAS H32 NY8 sing 423 n n CAU H34 NY8 sing 424 n n CAU H35 NY8 sing 425 n n CAK H36 NY8 sing 426 n n CAI H37 NY8 sing 427 n n CAF H38 NY8 sing 428 n n CAE H39 NY8 sing 429 n n CAH H40 NY8 sing 430 n n CAJ H41 NY8 sing 431 n n CAG H42 NY8 sing 432 n n # _atom_sites.entry_id 6TUY _atom_sites.fract_transf_matrix[1][1] 0.008225 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005654 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004283 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 FAD A 1 901 1837 FAD FAD . D 4 NY8 A 1 902 1 NY8 DRG . E 4 NY8 A 1 903 2 NY8 DRG . F 4 NY8 A 1 904 3 NY8 DRG . G 5 PO4 A 1 905 2 PO4 PO4 . H 6 CL A 1 906 2 CL CL . I 6 CL A 1 907 4 CL CL . J 6 CL A 1 908 6 CL CL . K 6 CL A 1 909 7 CL CL . L 6 CL A 1 910 8 CL CL . M 7 GOL A 1 911 3 GOL GOL . N 8 DMS A 1 912 1 DMS DMS . O 9 HOH A 1 1001 9 HOH HOH . O 9 HOH A 2 1002 33 HOH HOH . O 9 HOH A 3 1003 32 HOH HOH . O 9 HOH A 4 1004 5 HOH HOH . O 9 HOH A 5 1005 4 HOH HOH . O 9 HOH A 6 1006 10 HOH HOH . O 9 HOH A 7 1007 64 HOH HOH . O 9 HOH A 8 1008 35 HOH HOH . O 9 HOH A 9 1009 6 HOH HOH . O 9 HOH A 10 1010 38 HOH HOH . O 9 HOH A 11 1011 26 HOH HOH . O 9 HOH A 12 1012 43 HOH HOH . O 9 HOH A 13 1013 21 HOH HOH . O 9 HOH A 14 1014 57 HOH HOH . O 9 HOH A 15 1015 54 HOH HOH . O 9 HOH A 16 1016 14 HOH HOH . O 9 HOH A 17 1017 42 HOH HOH . O 9 HOH A 18 1018 39 HOH HOH . O 9 HOH A 19 1019 63 HOH HOH . O 9 HOH A 20 1020 53 HOH HOH . O 9 HOH A 21 1021 34 HOH HOH . O 9 HOH A 22 1022 3 HOH HOH . O 9 HOH A 23 1023 29 HOH HOH . O 9 HOH A 24 1024 23 HOH HOH . O 9 HOH A 25 1025 22 HOH HOH . O 9 HOH A 26 1026 56 HOH HOH . O 9 HOH A 27 1027 18 HOH HOH . O 9 HOH A 28 1028 16 HOH HOH . O 9 HOH A 29 1029 60 HOH HOH . O 9 HOH A 30 1030 24 HOH HOH . O 9 HOH A 31 1031 13 HOH HOH . O 9 HOH A 32 1032 62 HOH HOH . O 9 HOH A 33 1033 59 HOH HOH . O 9 HOH A 34 1034 45 HOH HOH . O 9 HOH A 35 1035 36 HOH HOH . P 9 HOH B 1 501 61 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 NY8 . . . D 4 0.371 44.351 83.229 1 79.03 ? C4 NY8 902 A 1 HETATM 2 C C5 NY8 . . . D 4 -0.136 44.387 81.925 1 68.59 ? C5 NY8 902 A 1 HETATM 3 C C6 NY8 . . . D 4 -0.914 45.477 81.616 1 57.28 ? C6 NY8 902 A 1 HETATM 4 N N1 NY8 . . . D 4 -1.053 46.442 82.488 1 75.82 ? N1 NY8 902 A 1 HETATM 5 N N3 NY8 . . . D 4 0.163 45.334 84.119 1 81.59 ? N3 NY8 902 A 1 HETATM 6 C CAC NY8 . . . D 4 1.551 50.675 86.584 1 64.87 ? CAC NY8 902 A 1 HETATM 7 N NBL NY8 . . . D 4 0.075 50.709 86.672 1 63.27 ? NBL NY8 902 A 1 HETATM 8 C CAD NY8 . . . D 4 -0.602 51.998 86.523 1 62.63 ? CAD NY8 902 A 1 HETATM 9 C CAR NY8 . . . D 4 -0.109 50.217 85.309 1 82.9 ? CAR NY8 902 A 1 HETATM 10 C CAN NY8 . . . D 4 -1.528 49.729 85.124 1 85.99 ? CAN NY8 902 A 1 HETATM 11 C CAO NY8 . . . D 4 -1.476 48.639 84.032 1 80.59 ? CAO NY8 902 A 1 HETATM 12 N NAX NY8 . . . D 4 -0.814 47.386 84.536 1 85.95 ? NAX NY8 902 A 1 HETATM 13 C C2 NY8 . . . D 4 -0.545 46.384 83.728 1 76.6 ? C2 NY8 902 A 1 HETATM 14 C CAL NY8 . . . D 4 1.107 43.267 83.647 1 82.76 ? CAL NY8 902 A 1 HETATM 15 C CBD NY8 . . . D 4 1.363 42.185 82.804 1 73.4 ? CBD NY8 902 A 1 HETATM 16 O OAZ NY8 . . . D 4 2.072 41.117 83.247 1 79 ? OAZ NY8 902 A 1 HETATM 17 C CAA NY8 . . . D 4 3.158 41.402 84.206 1 78.63 ? CAA NY8 902 A 1 HETATM 18 C CBE NY8 . . . D 4 0.865 42.189 81.495 1 80.31 ? CBE NY8 902 A 1 HETATM 19 O OBA NY8 . . . D 4 1.167 41.098 80.709 1 88.82 ? OBA NY8 902 A 1 HETATM 20 C CAB NY8 . . . D 4 0.316 40.795 79.543 1 93.39 ? CAB NY8 902 A 1 HETATM 21 C CAM NY8 . . . D 4 0.112 43.319 81.05 1 80.99 ? CAM NY8 902 A 1 HETATM 22 N NAY NY8 . . . D 4 -1.309 45.668 80.421 1 56.29 ? NAY NY8 902 A 1 HETATM 23 C CBK NY8 . . . D 4 -2.609 45.966 79.822 1 55.32 ? CBK NY8 902 A 1 HETATM 24 C CAQ NY8 . . . D 4 -3.706 46.233 80.752 1 58.18 ? CAQ NY8 902 A 1 HETATM 25 C CAT NY8 . . . D 4 -5.074 46.148 79.949 1 72.54 ? CAT NY8 902 A 1 HETATM 26 C CAP NY8 . . . D 4 -2.523 47.04 78.769 1 46.43 ? CAP NY8 902 A 1 HETATM 27 C CAS NY8 . . . D 4 -3.982 47.1 78.028 1 57.09 ? CAS NY8 902 A 1 HETATM 28 N NBM NY8 . . . D 4 -5.109 47.287 78.98 1 61.75 ? NBM NY8 902 A 1 HETATM 29 C CAU NY8 . . . D 4 -6.501 47.678 78.534 1 77.92 ? CAU NY8 902 A 1 HETATM 30 C CBB NY8 . . . D 4 -6.571 49.009 79.059 1 96.7 ? CBB NY8 902 A 1 HETATM 31 C CAK NY8 . . . D 4 -7.245 49.481 80.211 1 89.08 ? CAK NY8 902 A 1 HETATM 32 C CBH NY8 . . . D 4 -7.064 50.852 80.569 1 94.13 ? CBH NY8 902 A 1 HETATM 33 C CAI NY8 . . . D 4 -7.672 51.374 81.661 1 86.76 ? CAI NY8 902 A 1 HETATM 34 C CAF NY8 . . . D 4 -7.452 52.716 81.949 1 97.76 ? CAF NY8 902 A 1 HETATM 35 C CAE NY8 . . . D 4 -6.651 53.576 81.191 1 92.7 ? CAE NY8 902 A 1 HETATM 36 C CAH NY8 . . . D 4 -6.029 53.11 80.092 1 73.27 ? CAH NY8 902 A 1 HETATM 37 C CBG NY8 . . . D 4 -6.249 51.762 79.841 1 101.84 ? CBG NY8 902 A 1 HETATM 38 C CAJ NY8 . . . D 4 -5.591 51.271 78.755 1 123.26 ? CAJ NY8 902 A 1 HETATM 39 C CAG NY8 . . . D 4 -5.749 49.933 78.387 1 120.99 ? CAG NY8 902 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 39 #