data_6TUY # _model_server_result.job_id gfKgFdNJbQoMOvqsuPhpUg _model_server_result.datetime_utc '2024-11-26 07:01:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6tuy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":904}' # _entry.id 6TUY # _exptl.entry_id 6TUY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 528.688 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}2-[3-(dimethylamino)propyl]-6,7-dimethoxy-~{N}4-[1-(naphthalen-2-ylmethyl)piperidin-4-yl]quinazoline-2,4-diamine _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6TUY _cell.length_a 121.578 _cell.length_b 176.862 _cell.length_c 233.495 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6TUY _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N # _chem_comp.formula 'C31 H40 N6 O2' _chem_comp.formula_weight 528.688 _chem_comp.id NY8 _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}2-[3-(dimethylamino)propyl]-6,7-dimethoxy-~{N}4-[1-(naphthalen-2-ylmethyl)piperidin-4-yl]quinazoline-2,4-diamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAS CAP NY8 sing 350 n n CAS NBM NY8 sing 351 n n CAG CAJ NY8 doub 352 n y CAG CBB NY8 sing 353 n y CAU NBM NY8 sing 354 n n CAU CBB NY8 sing 355 n n CAJ CBG NY8 sing 356 n y CAP CBK NY8 sing 357 n n NBM CAT NY8 sing 358 n n CBB CAK NY8 doub 359 n y CAB OBA NY8 sing 360 n n CBK NAY NY8 sing 361 n n CBK CAQ NY8 sing 362 n n CBG CAH NY8 doub 363 n y CBG CBH NY8 sing 364 n y CAT CAQ NY8 sing 365 n n CAH CAE NY8 sing 366 n y CAK CBH NY8 sing 367 n y NAY C6 NY8 sing 368 n n CBH CAI NY8 doub 369 n y OBA CBE NY8 sing 370 n n CAM CBE NY8 doub 371 n y CAM C5 NY8 sing 372 n y CAE CAF NY8 doub 373 n y CBE CBD NY8 sing 374 n y C6 C5 NY8 sing 375 n y C6 N1 NY8 doub 376 n y CAI CAF NY8 sing 377 n y C5 C4 NY8 doub 378 n y N1 C2 NY8 sing 379 n y CBD OAZ NY8 sing 380 n n CBD CAL NY8 doub 381 n y C4 CAL NY8 sing 382 n y C4 N3 NY8 sing 383 n y OAZ CAA NY8 sing 384 n n C2 N3 NY8 doub 385 n y C2 NAX NY8 sing 386 n n CAO NAX NY8 sing 387 n n CAO CAN NY8 sing 388 n n CAN CAR NY8 sing 389 n n CAR NBL NY8 sing 390 n n CAD NBL NY8 sing 391 n n CAC NBL NY8 sing 392 n n CAC H1 NY8 sing 393 n n CAC H2 NY8 sing 394 n n CAC H3 NY8 sing 395 n n CAD H5 NY8 sing 396 n n CAD H6 NY8 sing 397 n n CAD H7 NY8 sing 398 n n CAR H8 NY8 sing 399 n n CAR H9 NY8 sing 400 n n CAN H10 NY8 sing 401 n n CAN H11 NY8 sing 402 n n CAO H12 NY8 sing 403 n n CAO H13 NY8 sing 404 n n NAX H14 NY8 sing 405 n n CAL H15 NY8 sing 406 n n CAA H16 NY8 sing 407 n n CAA H17 NY8 sing 408 n n CAA H18 NY8 sing 409 n n CAB H19 NY8 sing 410 n n CAB H20 NY8 sing 411 n n CAB H21 NY8 sing 412 n n CAM H22 NY8 sing 413 n n NAY H23 NY8 sing 414 n n CBK H24 NY8 sing 415 n n CAQ H25 NY8 sing 416 n n CAQ H26 NY8 sing 417 n n CAT H27 NY8 sing 418 n n CAT H28 NY8 sing 419 n n CAP H29 NY8 sing 420 n n CAP H30 NY8 sing 421 n n CAS H31 NY8 sing 422 n n CAS H32 NY8 sing 423 n n CAU H34 NY8 sing 424 n n CAU H35 NY8 sing 425 n n CAK H36 NY8 sing 426 n n CAI H37 NY8 sing 427 n n CAF H38 NY8 sing 428 n n CAE H39 NY8 sing 429 n n CAH H40 NY8 sing 430 n n CAJ H41 NY8 sing 431 n n CAG H42 NY8 sing 432 n n # _atom_sites.entry_id 6TUY _atom_sites.fract_transf_matrix[1][1] 0.008225 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005654 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004283 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 FAD A 1 901 1837 FAD FAD . D 4 NY8 A 1 902 1 NY8 DRG . E 4 NY8 A 1 903 2 NY8 DRG . F 4 NY8 A 1 904 3 NY8 DRG . G 5 PO4 A 1 905 2 PO4 PO4 . H 6 CL A 1 906 2 CL CL . I 6 CL A 1 907 4 CL CL . J 6 CL A 1 908 6 CL CL . K 6 CL A 1 909 7 CL CL . L 6 CL A 1 910 8 CL CL . M 7 GOL A 1 911 3 GOL GOL . N 8 DMS A 1 912 1 DMS DMS . O 9 HOH A 1 1001 9 HOH HOH . O 9 HOH A 2 1002 33 HOH HOH . O 9 HOH A 3 1003 32 HOH HOH . O 9 HOH A 4 1004 5 HOH HOH . O 9 HOH A 5 1005 4 HOH HOH . O 9 HOH A 6 1006 10 HOH HOH . O 9 HOH A 7 1007 64 HOH HOH . O 9 HOH A 8 1008 35 HOH HOH . O 9 HOH A 9 1009 6 HOH HOH . O 9 HOH A 10 1010 38 HOH HOH . O 9 HOH A 11 1011 26 HOH HOH . O 9 HOH A 12 1012 43 HOH HOH . O 9 HOH A 13 1013 21 HOH HOH . O 9 HOH A 14 1014 57 HOH HOH . O 9 HOH A 15 1015 54 HOH HOH . O 9 HOH A 16 1016 14 HOH HOH . O 9 HOH A 17 1017 42 HOH HOH . O 9 HOH A 18 1018 39 HOH HOH . O 9 HOH A 19 1019 63 HOH HOH . O 9 HOH A 20 1020 53 HOH HOH . O 9 HOH A 21 1021 34 HOH HOH . O 9 HOH A 22 1022 3 HOH HOH . O 9 HOH A 23 1023 29 HOH HOH . O 9 HOH A 24 1024 23 HOH HOH . O 9 HOH A 25 1025 22 HOH HOH . O 9 HOH A 26 1026 56 HOH HOH . O 9 HOH A 27 1027 18 HOH HOH . O 9 HOH A 28 1028 16 HOH HOH . O 9 HOH A 29 1029 60 HOH HOH . O 9 HOH A 30 1030 24 HOH HOH . O 9 HOH A 31 1031 13 HOH HOH . O 9 HOH A 32 1032 62 HOH HOH . O 9 HOH A 33 1033 59 HOH HOH . O 9 HOH A 34 1034 45 HOH HOH . O 9 HOH A 35 1035 36 HOH HOH . P 9 HOH B 1 501 61 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 NY8 . . . F 4 -2.515 37.255 86.904 1 108.58 ? C4 NY8 904 A 1 HETATM 2 C C5 NY8 . . . F 4 -3.237 38.031 87.834 1 112.36 ? C5 NY8 904 A 1 HETATM 3 C C6 NY8 . . . F 4 -2.908 37.979 89.234 1 133.89 ? C6 NY8 904 A 1 HETATM 4 N N1 NY8 . . . F 4 -1.875 37.198 89.651 1 138.31 ? N1 NY8 904 A 1 HETATM 5 N N3 NY8 . . . F 4 -1.491 36.462 87.424 1 122.69 ? N3 NY8 904 A 1 HETATM 6 C CAC NY8 . . . F 4 0.854 37.748 93.072 1 147.65 ? CAC NY8 904 A 1 HETATM 7 N NBL NY8 . . . F 4 2.301 37.727 92.64 1 174.16 ? NBL NY8 904 A 1 HETATM 8 C CAD NY8 . . . F 4 2.767 39.091 92.215 1 146.06 ? CAD NY8 904 A 1 HETATM 9 C CAR NY8 . . . F 4 2.802 36.631 91.722 1 156.44 ? CAR NY8 904 A 1 HETATM 10 C CAN NY8 . . . F 4 1.759 35.642 91.116 1 140.69 ? CAN NY8 904 A 1 HETATM 11 C CAO NY8 . . . F 4 1.141 36.279 89.823 1 135.24 ? CAO NY8 904 A 1 HETATM 12 N NAX NY8 . . . F 4 -0.156 35.682 89.33 1 112.3 ? NAX NY8 904 A 1 HETATM 13 C C2 NY8 . . . F 4 -1.165 36.427 88.781 1 124.78 ? C2 NY8 904 A 1 HETATM 14 C CAL NY8 . . . F 4 -2.884 37.339 85.515 1 89.4 ? CAL NY8 904 A 1 HETATM 15 C CBD NY8 . . . F 4 -3.965 38.152 85.04 1 96.02 ? CBD NY8 904 A 1 HETATM 16 O OAZ NY8 . . . F 4 -4.415 38.312 83.722 1 97.37 ? OAZ NY8 904 A 1 HETATM 17 C CAA NY8 . . . F 4 -4.508 37.334 82.674 1 91.21 ? CAA NY8 904 A 1 HETATM 18 C CBE NY8 . . . F 4 -4.641 38.932 86.002 1 95.89 ? CBE NY8 904 A 1 HETATM 19 O OBA NY8 . . . F 4 -5.727 39.792 85.753 1 86.25 ? OBA NY8 904 A 1 HETATM 20 C CAB NY8 . . . F 4 -6.2 40.497 84.578 1 94.65 ? CAB NY8 904 A 1 HETATM 21 C CAM NY8 . . . F 4 -4.273 38.822 87.333 1 98.52 ? CAM NY8 904 A 1 HETATM 22 N NAY NY8 . . . F 4 -3.597 38.794 90.079 1 146.8 ? NAY NY8 904 A 1 HETATM 23 C CBK NY8 . . . F 4 -3.945 38.669 91.512 1 160.51 ? CBK NY8 904 A 1 HETATM 24 C CAQ NY8 . . . F 4 -3.318 37.495 92.286 1 161.37 ? CAQ NY8 904 A 1 HETATM 25 C CAT NY8 . . . F 4 -3.922 37.486 93.623 1 164.77 ? CAT NY8 904 A 1 HETATM 26 C CAP NY8 . . . F 4 -3.445 39.924 92.118 1 157.34 ? CAP NY8 904 A 1 HETATM 27 C CAS NY8 . . . F 4 -3.983 39.943 93.513 1 158.97 ? CAS NY8 904 A 1 HETATM 28 N NBM NY8 . . . F 4 -3.55 38.767 94.312 1 160.81 ? NBM NY8 904 A 1 HETATM 29 C CAU NY8 . . . F 4 -4.218 38.784 95.595 1 154.37 ? CAU NY8 904 A 1 HETATM 30 C CBB NY8 . . . F 4 -4.11 40.017 96.307 1 165.2 ? CBB NY8 904 A 1 HETATM 31 C CAK NY8 . . . F 4 -2.902 40.376 96.952 1 159.28 ? CAK NY8 904 A 1 HETATM 32 C CBH NY8 . . . F 4 -2.83 41.592 97.675 1 152.63 ? CBH NY8 904 A 1 HETATM 33 C CAI NY8 . . . F 4 -1.62 41.932 98.315 1 129.75 ? CAI NY8 904 A 1 HETATM 34 C CAF NY8 . . . F 4 -1.544 43.123 99.025 1 110.39 ? CAF NY8 904 A 1 HETATM 35 C CAE NY8 . . . F 4 -2.683 43.95 99.089 1 121.21 ? CAE NY8 904 A 1 HETATM 36 C CAH NY8 . . . F 4 -3.901 43.645 98.468 1 113.19 ? CAH NY8 904 A 1 HETATM 37 C CBG NY8 . . . F 4 -3.977 42.455 97.748 1 133.97 ? CBG NY8 904 A 1 HETATM 38 C CAJ NY8 . . . F 4 -5.182 42.11 97.104 1 126.96 ? CAJ NY8 904 A 1 HETATM 39 C CAG NY8 . . . F 4 -5.24 40.896 96.393 1 148.5 ? CAG NY8 904 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 39 #