data_6TV6 # _model_server_result.job_id YCFHHRDN1PzKDfJjSGoWiw _model_server_result.datetime_utc '2024-12-21 14:56:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6tv6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":500}' # _entry.id 6TV6 # _exptl.entry_id 6TV6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6TV6 _cell.length_a 137.79 _cell.length_b 147.64 _cell.length_c 81.47 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6TV6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall 'P 2 2ab' _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'point symmetry operation' ? ? -1 0 0 0 -1 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASN 196 A ASN 193 1_555 A N RPI 197 A RPI 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C RPI 197 A RPI 194 1_555 A N ILE 198 A ILE 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale3 B C ASN 196 B ASN 193 1_555 B N RPI 197 B RPI 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 B C RPI 197 B RPI 194 1_555 B N ILE 198 B ILE 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale5 C C ASN 196 C ASN 193 1_555 C N RPI 197 C RPI 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale6 C C RPI 197 C RPI 194 1_555 C N ILE 198 C ILE 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale7 D C ASN 196 D ASN 193 1_555 D N RPI 197 D RPI 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale8 D C RPI 197 D RPI 194 1_555 D N ILE 198 D ILE 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? metalc ? metalc1 A OD2 ASP 149 A ASP 146 1_555 E MG MG . A MG 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? metalc ? metalc2 E MG MG . A MG 500 1_555 I O HOH . A HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? metalc ? metalc3 E MG MG . A MG 500 1_555 I O HOH . A HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc4 E MG MG . A MG 500 1_555 I O HOH . A HOH 612 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? metalc ? metalc5 E MG MG . A MG 500 1_555 I O HOH . A HOH 619 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc6 E MG MG . A MG 500 1_555 I O HOH . A HOH 625 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? metalc ? metalc7 B OD2 ASP 149 B ASP 146 1_555 F MG MG . B MG 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc8 F MG MG . B MG 500 1_555 J O HOH . B HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? metalc ? metalc9 F MG MG . B MG 500 1_555 J O HOH . B HOH 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? metalc ? metalc10 F MG MG . B MG 500 1_555 J O HOH . B HOH 616 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? metalc ? metalc11 F MG MG . B MG 500 1_555 J O HOH . B HOH 618 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc12 F MG MG . B MG 500 1_555 J O HOH . B HOH 623 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc13 C OD2 ASP 149 C ASP 146 1_555 G MG MG . C MG 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc14 G MG MG . C MG 500 1_555 K O HOH . C HOH 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? metalc ? metalc15 G MG MG . C MG 500 1_555 K O HOH . C HOH 617 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? metalc ? metalc16 G MG MG . C MG 500 1_555 K O HOH . C HOH 630 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? metalc ? metalc17 G MG MG . C MG 500 1_555 K O HOH . C HOH 636 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc18 G MG MG . C MG 500 1_555 K O HOH . C HOH 640 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? metalc ? metalc19 D OD2 ASP 149 D ASP 146 1_555 H MG MG . D MG 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? metalc ? metalc20 H MG MG . D MG 500 1_555 L O HOH . D HOH 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc21 H MG MG . D MG 500 1_555 L O HOH . D HOH 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? metalc ? metalc22 H MG MG . D MG 500 1_555 L O HOH . D HOH 612 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc23 H MG MG . D MG 500 1_555 L O HOH . D HOH 618 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc24 H MG MG . D MG 500 1_555 L O HOH . D HOH 627 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.961 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6TV6 _atom_sites.fract_transf_matrix[1][1] 0.007257 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006773 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012274 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 MG A 1 500 500 MG MG . F 2 MG B 1 500 500 MG MG . G 2 MG C 1 500 500 MG MG . H 2 MG D 1 500 500 MG MG . I 3 HOH A 1 601 503 HOH HOH . I 3 HOH A 2 602 502 HOH HOH . I 3 HOH A 3 603 18 HOH HOH . I 3 HOH A 4 604 61 HOH HOH . I 3 HOH A 5 605 48 HOH HOH . I 3 HOH A 6 606 42 HOH HOH . I 3 HOH A 7 607 57 HOH HOH . I 3 HOH A 8 608 97 HOH HOH . I 3 HOH A 9 609 29 HOH HOH . I 3 HOH A 10 610 67 HOH HOH . I 3 HOH A 11 611 81 HOH HOH . I 3 HOH A 12 612 501 HOH HOH . I 3 HOH A 13 613 92 HOH HOH . I 3 HOH A 14 614 80 HOH HOH . I 3 HOH A 15 615 10 HOH HOH . I 3 HOH A 16 616 17 HOH HOH . I 3 HOH A 17 617 21 HOH HOH . I 3 HOH A 18 618 12 HOH HOH . I 3 HOH A 19 619 504 HOH HOH . I 3 HOH A 20 620 71 HOH HOH . I 3 HOH A 21 621 64 HOH HOH . I 3 HOH A 22 622 73 HOH HOH . I 3 HOH A 23 623 89 HOH HOH . I 3 HOH A 24 624 40 HOH HOH . I 3 HOH A 25 625 505 HOH HOH . J 3 HOH B 1 601 503 HOH HOH . J 3 HOH B 2 602 66 HOH HOH . J 3 HOH B 3 603 94 HOH HOH . J 3 HOH B 4 604 5 HOH HOH . J 3 HOH B 5 605 76 HOH HOH . J 3 HOH B 6 606 502 HOH HOH . J 3 HOH B 7 607 86 HOH HOH . J 3 HOH B 8 608 83 HOH HOH . J 3 HOH B 9 609 2 HOH HOH . J 3 HOH B 10 610 74 HOH HOH . J 3 HOH B 11 611 1 HOH HOH . J 3 HOH B 12 612 70 HOH HOH . J 3 HOH B 13 613 60 HOH HOH . J 3 HOH B 14 614 4 HOH HOH . J 3 HOH B 15 615 19 HOH HOH . J 3 HOH B 16 616 501 HOH HOH . J 3 HOH B 17 617 32 HOH HOH . J 3 HOH B 18 618 504 HOH HOH . J 3 HOH B 19 619 75 HOH HOH . J 3 HOH B 20 620 6 HOH HOH . J 3 HOH B 21 621 84 HOH HOH . J 3 HOH B 22 622 9 HOH HOH . J 3 HOH B 23 623 505 HOH HOH . J 3 HOH B 24 624 93 HOH HOH . K 3 HOH C 1 601 68 HOH HOH . K 3 HOH C 2 602 78 HOH HOH . K 3 HOH C 3 603 95 HOH HOH . K 3 HOH C 4 604 503 HOH HOH . K 3 HOH C 5 605 30 HOH HOH . K 3 HOH C 6 606 34 HOH HOH . K 3 HOH C 7 607 41 HOH HOH . K 3 HOH C 8 608 27 HOH HOH . K 3 HOH C 9 609 58 HOH HOH . K 3 HOH C 10 610 13 HOH HOH . K 3 HOH C 11 611 3 HOH HOH . K 3 HOH C 12 612 33 HOH HOH . K 3 HOH C 13 613 56 HOH HOH . K 3 HOH C 14 614 44 HOH HOH . K 3 HOH C 15 615 45 HOH HOH . K 3 HOH C 16 616 22 HOH HOH . K 3 HOH C 17 617 502 HOH HOH . K 3 HOH C 18 618 39 HOH HOH . K 3 HOH C 19 619 54 HOH HOH . K 3 HOH C 20 620 36 HOH HOH . K 3 HOH C 21 621 38 HOH HOH . K 3 HOH C 22 622 52 HOH HOH . K 3 HOH C 23 623 47 HOH HOH . K 3 HOH C 24 624 37 HOH HOH . K 3 HOH C 25 625 26 HOH HOH . K 3 HOH C 26 626 49 HOH HOH . K 3 HOH C 27 627 65 HOH HOH . K 3 HOH C 28 628 11 HOH HOH . K 3 HOH C 29 629 62 HOH HOH . K 3 HOH C 30 630 501 HOH HOH . K 3 HOH C 31 631 35 HOH HOH . K 3 HOH C 32 632 8 HOH HOH . K 3 HOH C 33 633 90 HOH HOH . K 3 HOH C 34 634 16 HOH HOH . K 3 HOH C 35 635 20 HOH HOH . K 3 HOH C 36 636 504 HOH HOH . K 3 HOH C 37 637 51 HOH HOH . K 3 HOH C 38 638 69 HOH HOH . K 3 HOH C 39 639 24 HOH HOH . K 3 HOH C 40 640 505 HOH HOH . L 3 HOH D 1 601 96 HOH HOH . L 3 HOH D 2 602 82 HOH HOH . L 3 HOH D 3 603 50 HOH HOH . L 3 HOH D 4 604 503 HOH HOH . L 3 HOH D 5 605 15 HOH HOH . L 3 HOH D 6 606 502 HOH HOH . L 3 HOH D 7 607 59 HOH HOH . L 3 HOH D 8 608 85 HOH HOH . L 3 HOH D 9 609 87 HOH HOH . L 3 HOH D 10 610 7 HOH HOH . L 3 HOH D 11 611 46 HOH HOH . L 3 HOH D 12 612 501 HOH HOH . L 3 HOH D 13 613 55 HOH HOH . L 3 HOH D 14 614 79 HOH HOH . L 3 HOH D 15 615 43 HOH HOH . L 3 HOH D 16 616 77 HOH HOH . L 3 HOH D 17 617 53 HOH HOH . L 3 HOH D 18 618 504 HOH HOH . L 3 HOH D 19 619 88 HOH HOH . L 3 HOH D 20 620 31 HOH HOH . L 3 HOH D 21 621 23 HOH HOH . L 3 HOH D 22 622 91 HOH HOH . L 3 HOH D 23 623 25 HOH HOH . L 3 HOH D 24 624 14 HOH HOH . L 3 HOH D 25 625 28 HOH HOH . L 3 HOH D 26 626 63 HOH HOH . L 3 HOH D 27 627 505 HOH HOH . L 3 HOH D 28 628 72 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 2 _atom_site.Cartn_x -12.993 _atom_site.Cartn_y 57.246 _atom_site.Cartn_z -30.509 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 69.79 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 500 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 252 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #