data_6TVY # _model_server_result.job_id l2BTDy5aSyXuNL8sHNZvjA _model_server_result.datetime_utc '2024-11-15 05:41:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6tvy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":306}' # _entry.id 6TVY # _exptl.entry_id 6TVY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 158.925 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TERBIUM(III) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6TVY _cell.length_a 78.81 _cell.length_b 78.81 _cell.length_c 38.332 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6TVY _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall 'P 4nw 2abw' _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc1 A O SER 60 A SER 60 1_555 B NA NA . A NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.07 ? metalc ? metalc2 A O CYS 64 A CYS 64 1_555 B NA NA . A NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.869 ? metalc ? metalc3 A OG SER 72 A SER 72 1_555 B NA NA . A NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc4 A O ARG 73 A ARG 73 1_555 B NA NA . A NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.714 ? metalc ? metalc5 A OD1 ASP 101 A ASP 101 1_555 E TB 7MT . A 7MT 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.732 ? metalc ? metalc6 A OD2 ASP 101 A ASP 101 1_555 E TB 7MT . A 7MT 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc7 B NA NA . A NA 301 1_555 H O HOH . A HOH 431 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.563 ? metalc ? metalc8 E O25 7MT . A 7MT 304 1_555 F TB TB . A TB 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc9 E O25 7MT . A 7MT 304 1_555 G TB TB . A TB 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? # _chem_comp.formula 'Tb 3' _chem_comp.formula_weight 158.925 _chem_comp.id TB _chem_comp.mon_nstd_flag . _chem_comp.name 'TERBIUM(III) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6TVY _atom_sites.fract_transf_matrix[1][1] 0.012689 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012689 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026088 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 301 301 NA NA . C 3 CL A 1 302 401 CL CL . D 3 CL A 1 303 402 CL CL . E 4 7MT A 1 304 202 7MT 7MT . F 5 TB A 1 305 203 TB TB . G 5 TB A 1 306 204 TB TB . H 6 HOH A 1 401 146 HOH HOH . H 6 HOH A 2 402 115 HOH HOH . H 6 HOH A 3 403 118 HOH HOH . H 6 HOH A 4 404 102 HOH HOH . H 6 HOH A 5 405 101 HOH HOH . H 6 HOH A 6 406 143 HOH HOH . H 6 HOH A 7 407 122 HOH HOH . H 6 HOH A 8 408 133 HOH HOH . H 6 HOH A 9 409 121 HOH HOH . H 6 HOH A 10 410 136 HOH HOH . H 6 HOH A 11 411 141 HOH HOH . H 6 HOH A 12 412 131 HOH HOH . H 6 HOH A 13 413 134 HOH HOH . H 6 HOH A 14 414 138 HOH HOH . H 6 HOH A 15 415 103 HOH HOH . H 6 HOH A 16 416 123 HOH HOH . H 6 HOH A 17 417 116 HOH HOH . H 6 HOH A 18 418 155 HOH HOH . H 6 HOH A 19 419 132 HOH HOH . H 6 HOH A 20 420 120 HOH HOH . H 6 HOH A 21 421 117 HOH HOH . H 6 HOH A 22 422 154 HOH HOH . H 6 HOH A 23 423 125 HOH HOH . H 6 HOH A 24 424 105 HOH HOH . H 6 HOH A 25 425 112 HOH HOH . H 6 HOH A 26 426 149 HOH HOH . H 6 HOH A 27 427 160 HOH HOH . H 6 HOH A 28 428 147 HOH HOH . H 6 HOH A 29 429 159 HOH HOH . H 6 HOH A 30 430 129 HOH HOH . H 6 HOH A 31 431 110 HOH HOH . H 6 HOH A 32 432 139 HOH HOH . H 6 HOH A 33 433 127 HOH HOH . H 6 HOH A 34 434 126 HOH HOH . H 6 HOH A 35 435 130 HOH HOH . H 6 HOH A 36 436 164 HOH HOH . H 6 HOH A 37 437 107 HOH HOH . H 6 HOH A 38 438 113 HOH HOH . H 6 HOH A 39 439 109 HOH HOH . H 6 HOH A 40 440 202 HOH HOH . H 6 HOH A 41 441 151 HOH HOH . H 6 HOH A 42 442 111 HOH HOH . H 6 HOH A 43 443 128 HOH HOH . H 6 HOH A 44 444 108 HOH HOH . H 6 HOH A 45 445 201 HOH HOH . H 6 HOH A 46 446 119 HOH HOH . H 6 HOH A 47 447 165 HOH HOH . H 6 HOH A 48 448 140 HOH HOH . H 6 HOH A 49 449 144 HOH HOH . H 6 HOH A 50 450 163 HOH HOH . H 6 HOH A 51 451 142 HOH HOH . H 6 HOH A 52 452 150 HOH HOH . H 6 HOH A 53 453 148 HOH HOH . H 6 HOH A 54 454 153 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol TB _atom_site.label_atom_id TB _atom_site.label_comp_id TB _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 5 _atom_site.Cartn_x 3.427 _atom_site.Cartn_y 28.6 _atom_site.Cartn_z -10.021 _atom_site.occupancy 0.2 _atom_site.B_iso_or_equiv 48.33 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id TB _atom_site.auth_comp_id TB _atom_site.auth_seq_id 306 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #