data_6TWQ
#
_model_server_result.job_id            P8qNTh9KElIAXjTWyPQxKQ 
_model_server_result.datetime_utc      '2024-12-03 17:27:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6twq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"N","auth_seq_id":901}' 
#
_entry.id    6TWQ 
#
_exptl.entry_id    6TWQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6TWQ 
_cell.length_a            60.81 
_cell.length_b            97.13 
_cell.length_c            201.02 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6TWQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    'P 2 2ab (z,x,y)' 
_symmetry.space_group_name_H-M     'P 2 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H,I,J,K,L,M,U 1 1 
C,D,N,O,P,Q,R,S,T,V 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 F N N 
? 4 N N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O GLY 138 B GLY 589 1_555 I CA CA . B CA 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.98 ? 
metalc ? metalc2 A O VAL 139 B VAL 590 1_555 I CA CA . B CA 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.724 ? 
metalc ? metalc3 A OE1 GLU 184 B GLU 635 1_555 J CA CA . B CA 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.006 ? 
metalc ? metalc4 A OE2 GLU 184 B GLU 635 1_555 J CA CA . B CA 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.077 ? 
metalc ? metalc5 A O GLY 208 B GLY 659 1_555 K CA CA . B CA 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.381 ? 
metalc ? metalc6 A OD2 ASP 250 B ASP 701 1_555 K CA CA . B CA 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? 
metalc ? metalc7 A OG SER 322 B SER 773 1_555 T CA CA . A CA 907 3_344 ? ? ? ? ? ? ? ? ? ? ? ? 3.198 ? 
metalc ? metalc8 A O MET 366 B MET 817 1_555 M CA CA . B CA 909 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.584 ? 
metalc ? metalc9 A O GLY 368 B GLY 819 1_555 M CA CA . B CA 909 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? 
metalc ? metalc10 A O GLY 370 B GLY 821 1_555 M CA CA . B CA 909 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.407 ? 
metalc ? metalc11 A OD1 ASP 410 B ASP 861 1_555 M CA CA . B CA 909 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? 
metalc ? metalc12 A OD2 ASP 410 B ASP 861 1_555 M CA CA . B CA 909 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.006 ? 
metalc ? metalc13 M CA CA . B CA 909 3_454 D OG SER 322 A SER 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.862 ? 
metalc ? metalc14 D O GLY 138 A GLY 589 1_555 R CA CA . A CA 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.677 ? 
metalc ? metalc15 D O VAL 139 A VAL 590 1_555 R CA CA . A CA 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.921 ? 
metalc ? metalc16 D OE1 GLU 184 A GLU 635 1_555 P CA CA . A CA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.104 ? 
metalc ? metalc17 D OE2 GLU 184 A GLU 635 1_555 P CA CA . A CA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.182 ? 
metalc ? metalc18 D O GLY 208 A GLY 659 1_555 Q CA CA . A CA 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? 
metalc ? metalc19 D OD2 ASP 250 A ASP 701 1_555 Q CA CA . A CA 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? 
metalc ? metalc20 D O GLY 290 A GLY 741 1_555 S CA CA . A CA 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.697 ? 
metalc ? metalc21 D O ARG 293 A ARG 744 1_555 S CA CA . A CA 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.492 ? 
metalc ? metalc22 D O GLY 295 A GLY 746 1_555 S CA CA . A CA 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.914 ? 
metalc ? metalc23 D OE1 GLU 335 A GLU 786 1_555 S CA CA . A CA 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.052 ? 
metalc ? metalc24 D OE2 GLU 335 A GLU 786 1_555 S CA CA . A CA 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? 
metalc ? metalc25 D O MET 366 A MET 817 1_555 T CA CA . A CA 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? 
metalc ? metalc26 D O GLY 368 A GLY 819 1_555 T CA CA . A CA 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? 
metalc ? metalc27 D O GLY 370 A GLY 821 1_555 T CA CA . A CA 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? 
metalc ? metalc28 D OD2 ASP 410 A ASP 861 1_555 T CA CA . A CA 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.623 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 149 n n 
C1 C2 GOL sing 150 n n 
C1 H11 GOL sing 151 n n 
C1 H12 GOL sing 152 n n 
O1 HO1 GOL sing 153 n n 
C2 O2 GOL sing 154 n n 
C2 C3 GOL sing 155 n n 
C2 H2 GOL sing 156 n n 
O2 HO2 GOL sing 157 n n 
C3 O3 GOL sing 158 n n 
C3 H31 GOL sing 159 n n 
C3 H32 GOL sing 160 n n 
O3 HO3 GOL sing 161 n n 
#
_atom_sites.entry_id                     6TWQ 
_atom_sites.fract_transf_matrix[1][1]    0.016445 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010295 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004975 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 CIT B 1 901 901 CIT CIT . 
F 4 GOL B 1 902 1001 GOL GOL . 
G 3 CIT B 1 903 1101 CIT CIT . 
H 5 CA B 1 904 106 CA CA . 
I 5 CA B 1 905 107 CA CA . 
J 5 CA B 1 906 108 CA CA . 
K 5 CA B 1 907 109 CA CA . 
L 5 CA B 1 908 110 CA CA . 
M 5 CA B 1 909 111 CA CA . 
N 4 GOL A 1 901 901 GOL GOL . 
O 3 CIT A 1 902 1001 CIT CIT . 
P 5 CA A 1 903 101 CA CA . 
Q 5 CA A 1 904 102 CA CA . 
R 5 CA A 1 905 103 CA CA . 
S 5 CA A 1 906 104 CA CA . 
T 5 CA A 1 907 105 CA CA . 
U 6 HOH B 1 1001 35 HOH HOH . 
U 6 HOH B 2 1002 32 HOH HOH . 
U 6 HOH B 3 1003 27 HOH HOH . 
U 6 HOH B 4 1004 7 HOH HOH . 
U 6 HOH B 5 1005 51 HOH HOH . 
U 6 HOH B 6 1006 44 HOH HOH . 
U 6 HOH B 7 1007 19 HOH HOH . 
U 6 HOH B 8 1008 6 HOH HOH . 
U 6 HOH B 9 1009 45 HOH HOH . 
U 6 HOH B 10 1010 20 HOH HOH . 
U 6 HOH B 11 1011 38 HOH HOH . 
U 6 HOH B 12 1012 8 HOH HOH . 
U 6 HOH B 13 1013 22 HOH HOH . 
U 6 HOH B 14 1014 25 HOH HOH . 
U 6 HOH B 15 1015 13 HOH HOH . 
U 6 HOH B 16 1016 49 HOH HOH . 
U 6 HOH B 17 1017 34 HOH HOH . 
U 6 HOH B 18 1018 2 HOH HOH . 
U 6 HOH B 19 1019 42 HOH HOH . 
U 6 HOH B 20 1020 40 HOH HOH . 
U 6 HOH B 21 1021 11 HOH HOH . 
U 6 HOH B 22 1022 33 HOH HOH . 
U 6 HOH B 23 1023 60 HOH HOH . 
U 6 HOH B 24 1024 15 HOH HOH . 
U 6 HOH B 25 1025 18 HOH HOH . 
U 6 HOH B 26 1026 37 HOH HOH . 
U 6 HOH B 27 1027 53 HOH HOH . 
U 6 HOH B 28 1028 59 HOH HOH . 
V 6 HOH A 1 1001 21 HOH HOH . 
V 6 HOH A 2 1002 3 HOH HOH . 
V 6 HOH A 3 1003 52 HOH HOH . 
V 6 HOH A 4 1004 1 HOH HOH . 
V 6 HOH A 5 1005 58 HOH HOH . 
V 6 HOH A 6 1006 12 HOH HOH . 
V 6 HOH A 7 1007 57 HOH HOH . 
V 6 HOH A 8 1008 23 HOH HOH . 
V 6 HOH A 9 1009 31 HOH HOH . 
V 6 HOH A 10 1010 28 HOH HOH . 
V 6 HOH A 11 1011 56 HOH HOH . 
V 6 HOH A 12 1012 5 HOH HOH . 
V 6 HOH A 13 1013 26 HOH HOH . 
V 6 HOH A 14 1014 36 HOH HOH . 
V 6 HOH A 15 1015 41 HOH HOH . 
V 6 HOH A 16 1016 4 HOH HOH . 
V 6 HOH A 17 1017 29 HOH HOH . 
V 6 HOH A 18 1018 10 HOH HOH . 
V 6 HOH A 19 1019 17 HOH HOH . 
V 6 HOH A 20 1020 16 HOH HOH . 
V 6 HOH A 21 1021 30 HOH HOH . 
V 6 HOH A 22 1022 39 HOH HOH . 
V 6 HOH A 23 1023 54 HOH HOH . 
V 6 HOH A 24 1024 14 HOH HOH . 
V 6 HOH A 25 1025 47 HOH HOH . 
V 6 HOH A 26 1026 24 HOH HOH . 
V 6 HOH A 27 1027 43 HOH HOH . 
V 6 HOH A 28 1028 55 HOH HOH . 
V 6 HOH A 29 1029 46 HOH HOH . 
V 6 HOH A 30 1030 50 HOH HOH . 
V 6 HOH A 31 1031 48 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . N 4 -49.931 54.294 -40.971 1 173.06 ? C1 GOL 901 A 1 
HETATM 2 O O1 GOL . . . N 4 -50.817 54.718 -41.954 1 227.39 ? O1 GOL 901 A 1 
HETATM 3 C C2 GOL . . . N 4 -49.094 53.146 -41.577 1 117.46 ? C2 GOL 901 A 1 
HETATM 4 O O2 GOL . . . N 4 -48.469 52.391 -40.598 1 99.35 ? O2 GOL 901 A 1 
HETATM 5 C C3 GOL . . . N 4 -50.107 52.314 -42.401 1 94.47 ? C3 GOL 901 A 1 
HETATM 6 O O3 GOL . . . N 4 -50.797 51.515 -41.49 1 86.44 ? O3 GOL 901 A 1 
#
_model_server_stats.io_time_ms              23 
_model_server_stats.parse_time_ms           38 
_model_server_stats.create_model_time_ms    21 
_model_server_stats.query_time_ms           308 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           6 
#