data_6TWQ # _model_server_result.job_id jqqMykWz4e638cY6yidsCA _model_server_result.datetime_utc '2024-11-04 20:30:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6twq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":902}' # _entry.id 6TWQ # _exptl.entry_id 6TWQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6TWQ _cell.length_a 60.81 _cell.length_b 97.13 _cell.length_c 201.02 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6TWQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall 'P 2 2ab (z,x,y)' _symmetry.space_group_name_H-M 'P 2 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,J,K,L,M,U 1 1 C,D,N,O,P,Q,R,S,T,V 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 G N N ? 3 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLY 138 B GLY 589 1_555 I CA CA . B CA 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.98 ? metalc ? metalc2 A O VAL 139 B VAL 590 1_555 I CA CA . B CA 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.724 ? metalc ? metalc3 A OE1 GLU 184 B GLU 635 1_555 J CA CA . B CA 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.006 ? metalc ? metalc4 A OE2 GLU 184 B GLU 635 1_555 J CA CA . B CA 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.077 ? metalc ? metalc5 A O GLY 208 B GLY 659 1_555 K CA CA . B CA 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.381 ? metalc ? metalc6 A OD2 ASP 250 B ASP 701 1_555 K CA CA . B CA 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? metalc ? metalc7 A OG SER 322 B SER 773 1_555 T CA CA . A CA 907 3_344 ? ? ? ? ? ? ? ? ? ? ? ? 3.198 ? metalc ? metalc8 A O MET 366 B MET 817 1_555 M CA CA . B CA 909 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.584 ? metalc ? metalc9 A O GLY 368 B GLY 819 1_555 M CA CA . B CA 909 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? metalc ? metalc10 A O GLY 370 B GLY 821 1_555 M CA CA . B CA 909 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.407 ? metalc ? metalc11 A OD1 ASP 410 B ASP 861 1_555 M CA CA . B CA 909 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? metalc ? metalc12 A OD2 ASP 410 B ASP 861 1_555 M CA CA . B CA 909 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.006 ? metalc ? metalc13 M CA CA . B CA 909 3_454 D OG SER 322 A SER 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.862 ? metalc ? metalc14 D O GLY 138 A GLY 589 1_555 R CA CA . A CA 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.677 ? metalc ? metalc15 D O VAL 139 A VAL 590 1_555 R CA CA . A CA 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.921 ? metalc ? metalc16 D OE1 GLU 184 A GLU 635 1_555 P CA CA . A CA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.104 ? metalc ? metalc17 D OE2 GLU 184 A GLU 635 1_555 P CA CA . A CA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.182 ? metalc ? metalc18 D O GLY 208 A GLY 659 1_555 Q CA CA . A CA 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc19 D OD2 ASP 250 A ASP 701 1_555 Q CA CA . A CA 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc20 D O GLY 290 A GLY 741 1_555 S CA CA . A CA 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.697 ? metalc ? metalc21 D O ARG 293 A ARG 744 1_555 S CA CA . A CA 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.492 ? metalc ? metalc22 D O GLY 295 A GLY 746 1_555 S CA CA . A CA 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.914 ? metalc ? metalc23 D OE1 GLU 335 A GLU 786 1_555 S CA CA . A CA 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.052 ? metalc ? metalc24 D OE2 GLU 335 A GLU 786 1_555 S CA CA . A CA 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc25 D O MET 366 A MET 817 1_555 T CA CA . A CA 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? metalc ? metalc26 D O GLY 368 A GLY 819 1_555 T CA CA . A CA 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc27 D O GLY 370 A GLY 821 1_555 T CA CA . A CA 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? metalc ? metalc28 D OD2 ASP 410 A ASP 861 1_555 T CA CA . A CA 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.623 ? # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 70 n n C1 O2 CIT sing 71 n n C1 C2 CIT sing 72 n n O2 HO2 CIT sing 73 n n C2 C3 CIT sing 74 n n C2 H21 CIT sing 75 n n C2 H22 CIT sing 76 n n C3 O7 CIT sing 77 n n C3 C4 CIT sing 78 n n C3 C6 CIT sing 79 n n O7 HO7 CIT sing 80 n n C4 C5 CIT sing 81 n n C4 H41 CIT sing 82 n n C4 H42 CIT sing 83 n n C5 O3 CIT doub 84 n n C5 O4 CIT sing 85 n n O4 HO4 CIT sing 86 n n C6 O5 CIT doub 87 n n C6 O6 CIT sing 88 n n O6 HO6 CIT sing 89 n n # _atom_sites.entry_id 6TWQ _atom_sites.fract_transf_matrix[1][1] 0.016445 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010295 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004975 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 CIT B 1 901 901 CIT CIT . F 4 GOL B 1 902 1001 GOL GOL . G 3 CIT B 1 903 1101 CIT CIT . H 5 CA B 1 904 106 CA CA . I 5 CA B 1 905 107 CA CA . J 5 CA B 1 906 108 CA CA . K 5 CA B 1 907 109 CA CA . L 5 CA B 1 908 110 CA CA . M 5 CA B 1 909 111 CA CA . N 4 GOL A 1 901 901 GOL GOL . O 3 CIT A 1 902 1001 CIT CIT . P 5 CA A 1 903 101 CA CA . Q 5 CA A 1 904 102 CA CA . R 5 CA A 1 905 103 CA CA . S 5 CA A 1 906 104 CA CA . T 5 CA A 1 907 105 CA CA . U 6 HOH B 1 1001 35 HOH HOH . U 6 HOH B 2 1002 32 HOH HOH . U 6 HOH B 3 1003 27 HOH HOH . U 6 HOH B 4 1004 7 HOH HOH . U 6 HOH B 5 1005 51 HOH HOH . U 6 HOH B 6 1006 44 HOH HOH . U 6 HOH B 7 1007 19 HOH HOH . U 6 HOH B 8 1008 6 HOH HOH . U 6 HOH B 9 1009 45 HOH HOH . U 6 HOH B 10 1010 20 HOH HOH . U 6 HOH B 11 1011 38 HOH HOH . U 6 HOH B 12 1012 8 HOH HOH . U 6 HOH B 13 1013 22 HOH HOH . U 6 HOH B 14 1014 25 HOH HOH . U 6 HOH B 15 1015 13 HOH HOH . U 6 HOH B 16 1016 49 HOH HOH . U 6 HOH B 17 1017 34 HOH HOH . U 6 HOH B 18 1018 2 HOH HOH . U 6 HOH B 19 1019 42 HOH HOH . U 6 HOH B 20 1020 40 HOH HOH . U 6 HOH B 21 1021 11 HOH HOH . U 6 HOH B 22 1022 33 HOH HOH . U 6 HOH B 23 1023 60 HOH HOH . U 6 HOH B 24 1024 15 HOH HOH . U 6 HOH B 25 1025 18 HOH HOH . U 6 HOH B 26 1026 37 HOH HOH . U 6 HOH B 27 1027 53 HOH HOH . U 6 HOH B 28 1028 59 HOH HOH . V 6 HOH A 1 1001 21 HOH HOH . V 6 HOH A 2 1002 3 HOH HOH . V 6 HOH A 3 1003 52 HOH HOH . V 6 HOH A 4 1004 1 HOH HOH . V 6 HOH A 5 1005 58 HOH HOH . V 6 HOH A 6 1006 12 HOH HOH . V 6 HOH A 7 1007 57 HOH HOH . V 6 HOH A 8 1008 23 HOH HOH . V 6 HOH A 9 1009 31 HOH HOH . V 6 HOH A 10 1010 28 HOH HOH . V 6 HOH A 11 1011 56 HOH HOH . V 6 HOH A 12 1012 5 HOH HOH . V 6 HOH A 13 1013 26 HOH HOH . V 6 HOH A 14 1014 36 HOH HOH . V 6 HOH A 15 1015 41 HOH HOH . V 6 HOH A 16 1016 4 HOH HOH . V 6 HOH A 17 1017 29 HOH HOH . V 6 HOH A 18 1018 10 HOH HOH . V 6 HOH A 19 1019 17 HOH HOH . V 6 HOH A 20 1020 16 HOH HOH . V 6 HOH A 21 1021 30 HOH HOH . V 6 HOH A 22 1022 39 HOH HOH . V 6 HOH A 23 1023 54 HOH HOH . V 6 HOH A 24 1024 14 HOH HOH . V 6 HOH A 25 1025 47 HOH HOH . V 6 HOH A 26 1026 24 HOH HOH . V 6 HOH A 27 1027 43 HOH HOH . V 6 HOH A 28 1028 55 HOH HOH . V 6 HOH A 29 1029 46 HOH HOH . V 6 HOH A 30 1030 50 HOH HOH . V 6 HOH A 31 1031 48 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . O 3 -75.835 60.299 -35.446 1 99.3 ? C1 CIT 902 A 1 HETATM 2 O O1 CIT . . . O 3 -76.357 59.241 -35.798 1 99.96 ? O1 CIT 902 A 1 HETATM 3 O O2 CIT . . . O 3 -74.814 60.378 -34.753 1 93.92 ? O2 CIT 902 A 1 HETATM 4 C C2 CIT . . . O 3 -76.468 61.603 -35.872 1 102.1 ? C2 CIT 902 A 1 HETATM 5 C C3 CIT . . . O 3 -75.944 62.793 -35.072 1 102.52 ? C3 CIT 902 A 1 HETATM 6 O O7 CIT . . . O 3 -74.586 62.518 -34.806 1 87.27 ? O7 CIT 902 A 1 HETATM 7 C C4 CIT . . . O 3 -76.068 64.083 -35.886 1 105.67 ? C4 CIT 902 A 1 HETATM 8 C C5 CIT . . . O 3 -77.33 64.883 -35.632 1 108.92 ? C5 CIT 902 A 1 HETATM 9 O O3 CIT . . . O 3 -78.415 64.297 -35.724 1 110.87 ? O3 CIT 902 A 1 HETATM 10 O O4 CIT . . . O 3 -77.218 66.071 -35.321 1 109.89 ? O4 CIT 902 A 1 HETATM 11 C C6 CIT . . . O 3 -76.764 62.915 -33.765 1 109.65 ? C6 CIT 902 A 1 HETATM 12 O O5 CIT . . . O 3 -77.404 61.912 -33.424 1 110.73 ? O5 CIT 902 A 1 HETATM 13 O O6 CIT . . . O 3 -76.751 63.997 -33.152 1 110.08 ? O6 CIT 902 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 30 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #