data_6TX0 # _model_server_result.job_id cnL9f69-EOvsGYAFJwF-Cw _model_server_result.datetime_utc '2024-11-08 03:06:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6tx0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":704}' # _entry.id 6TX0 # _exptl.entry_id 6TX0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6TX0 _cell.length_a 105.924 _cell.length_b 105.924 _cell.length_c 198.073 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6TX0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 L N N ? 3 M N N ? 3 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 61 A HIS 167 1_555 C FE FE . A FE 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? metalc ? metalc2 A NE2 HIS 100 A HIS 206 1_555 C FE FE . A FE 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? metalc ? metalc3 A OD2 ASP 101 A ASP 207 1_555 C FE FE . A FE 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? metalc ? metalc4 A OD1 ASP 101 A ASP 207 1_555 D MG MG . A MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? metalc ? metalc5 A OD1 ASP 205 A ASP 311 1_555 C FE FE . A FE 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc6 C FE FE . A FE 701 1_555 G O1A DZ4 . A DZ4 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? metalc ? metalc7 C FE FE . A FE 701 1_555 Q O HOH . A HOH 808 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? metalc ? metalc8 D MG MG . A MG 702 1_555 G O2A DZ4 . A DZ4 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc9 D MG MG . A MG 702 1_555 Q O HOH . A HOH 808 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? metalc ? metalc10 D MG MG . A MG 702 1_555 Q O HOH . A HOH 817 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc11 D MG MG . A MG 702 1_555 Q O HOH . A HOH 836 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? metalc ? metalc12 E MG MG . A MG 703 1_555 G O1B DZ4 . A DZ4 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? metalc ? metalc13 E MG MG . A MG 703 1_555 G O1G DZ4 . A DZ4 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.968 ? metalc ? metalc14 E MG MG . A MG 703 1_555 Q O HOH . A HOH 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.945 ? metalc ? metalc15 E MG MG . A MG 703 1_555 Q O HOH . A HOH 811 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? metalc ? metalc16 E MG MG . A MG 703 1_555 Q O HOH . A HOH 812 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.797 ? metalc ? metalc17 E MG MG . A MG 703 1_555 Q O HOH . A HOH 827 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? metalc ? metalc18 F MG MG . A MG 704 1_555 H O12 CZF . A CZF 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? metalc ? metalc19 F MG MG . A MG 704 1_555 H O14 CZF . A CZF 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? metalc ? metalc20 F MG MG . A MG 704 1_555 H O9 CZF . A CZF 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? metalc ? metalc21 F MG MG . A MG 704 1_555 J O1B DZ4 . B DZ4 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc22 F MG MG . A MG 704 1_555 J O2G DZ4 . B DZ4 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? metalc ? metalc23 F MG MG . A MG 704 1_555 R O HOH . B HOH 823 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.87 ? metalc ? metalc24 I O1B DZ4 . A DZ4 707 1_555 N MG MG . B MG 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? metalc ? metalc25 I O2G DZ4 . A DZ4 707 1_555 N MG MG . B MG 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? metalc ? metalc26 Q O HOH . A HOH 845 1_555 N MG MG . B MG 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc27 B NE2 HIS 61 B HIS 167 1_555 K FE FE . B FE 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc28 B NE2 HIS 100 B HIS 206 1_555 K FE FE . B FE 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? metalc ? metalc29 B OD2 ASP 101 B ASP 207 1_555 K FE FE . B FE 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? metalc ? metalc30 B OD1 ASP 101 B ASP 207 1_555 L MG MG . B MG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc31 B OD1 ASP 205 B ASP 311 1_555 K FE FE . B FE 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.97 ? metalc ? metalc32 K FE FE . B FE 702 1_555 O O1A DZ4 . B DZ4 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.135 ? metalc ? metalc33 K FE FE . B FE 702 1_555 R O HOH . B HOH 812 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc34 L MG MG . B MG 703 1_555 O O2A DZ4 . B DZ4 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? metalc ? metalc35 L MG MG . B MG 703 1_555 R O HOH . B HOH 812 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? metalc ? metalc36 L MG MG . B MG 703 1_555 R O HOH . B HOH 818 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? metalc ? metalc37 L MG MG . B MG 703 1_555 R O HOH . B HOH 822 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? metalc ? metalc38 M MG MG . B MG 704 1_555 O O1B DZ4 . B DZ4 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.88 ? metalc ? metalc39 M MG MG . B MG 704 1_555 O O1G DZ4 . B DZ4 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? metalc ? metalc40 M MG MG . B MG 704 1_555 R O HOH . B HOH 820 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.742 ? metalc ? metalc41 M MG MG . B MG 704 1_555 R O HOH . B HOH 829 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc42 M MG MG . B MG 704 1_555 R O HOH . B HOH 844 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? metalc ? metalc43 M MG MG . B MG 704 1_555 R O HOH . B HOH 847 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? metalc ? metalc44 N MG MG . B MG 705 1_555 P O9 CZF . B CZF 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.184 ? metalc ? metalc45 N MG MG . B MG 705 1_555 P O12 CZF . B CZF 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? metalc ? metalc46 N MG MG . B MG 705 1_555 P O14 CZF . B CZF 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.914 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6TX0 _atom_sites.fract_transf_matrix[1][1] 0.009441 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009441 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005049 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FE A 1 701 701 FE FE . D 3 MG A 1 702 702 MG MG . E 3 MG A 1 703 703 MG MG . F 3 MG A 1 704 704 MG MG . G 4 DZ4 A 1 705 801 DZ4 DAP . H 5 CZF A 1 706 802 CZF XTP . I 4 DZ4 A 1 707 803 DZ4 DAP . J 4 DZ4 B 1 701 803 DZ4 DAP . K 2 FE B 1 702 701 FE FE . L 3 MG B 1 703 702 MG MG . M 3 MG B 1 704 703 MG MG . N 3 MG B 1 705 704 MG MG . O 4 DZ4 B 1 706 801 DZ4 DAP . P 5 CZF B 1 707 802 CZF XTP . Q 6 HOH A 1 801 33 HOH HOH . Q 6 HOH A 2 802 8 HOH HOH . Q 6 HOH A 3 803 38 HOH HOH . Q 6 HOH A 4 804 93 HOH HOH . Q 6 HOH A 5 805 63 HOH HOH . Q 6 HOH A 6 806 35 HOH HOH . Q 6 HOH A 7 807 30 HOH HOH . Q 6 HOH A 8 808 901 HOH HOH . Q 6 HOH A 9 809 59 HOH HOH . Q 6 HOH A 10 810 109 HOH HOH . Q 6 HOH A 11 811 7 HOH HOH . Q 6 HOH A 12 812 10 HOH HOH . Q 6 HOH A 13 813 94 HOH HOH . Q 6 HOH A 14 814 12 HOH HOH . Q 6 HOH A 15 815 45 HOH HOH . Q 6 HOH A 16 816 74 HOH HOH . Q 6 HOH A 17 817 3 HOH HOH . Q 6 HOH A 18 818 64 HOH HOH . Q 6 HOH A 19 819 32 HOH HOH . Q 6 HOH A 20 820 29 HOH HOH . Q 6 HOH A 21 821 84 HOH HOH . Q 6 HOH A 22 822 50 HOH HOH . Q 6 HOH A 23 823 13 HOH HOH . Q 6 HOH A 24 824 92 HOH HOH . Q 6 HOH A 25 825 104 HOH HOH . Q 6 HOH A 26 826 83 HOH HOH . Q 6 HOH A 27 827 9 HOH HOH . Q 6 HOH A 28 828 76 HOH HOH . Q 6 HOH A 29 829 102 HOH HOH . Q 6 HOH A 30 830 100 HOH HOH . Q 6 HOH A 31 831 53 HOH HOH . Q 6 HOH A 32 832 115 HOH HOH . Q 6 HOH A 33 833 101 HOH HOH . Q 6 HOH A 34 834 55 HOH HOH . Q 6 HOH A 35 835 11 HOH HOH . Q 6 HOH A 36 836 4 HOH HOH . Q 6 HOH A 37 837 49 HOH HOH . Q 6 HOH A 38 838 40 HOH HOH . Q 6 HOH A 39 839 14 HOH HOH . Q 6 HOH A 40 840 28 HOH HOH . Q 6 HOH A 41 841 54 HOH HOH . Q 6 HOH A 42 842 86 HOH HOH . Q 6 HOH A 43 843 96 HOH HOH . Q 6 HOH A 44 844 88 HOH HOH . Q 6 HOH A 45 845 2 HOH HOH . Q 6 HOH A 46 846 90 HOH HOH . Q 6 HOH A 47 847 6 HOH HOH . Q 6 HOH A 48 848 75 HOH HOH . Q 6 HOH A 49 849 120 HOH HOH . Q 6 HOH A 50 850 91 HOH HOH . Q 6 HOH A 51 851 119 HOH HOH . Q 6 HOH A 52 852 98 HOH HOH . Q 6 HOH A 53 853 5 HOH HOH . Q 6 HOH A 54 854 89 HOH HOH . Q 6 HOH A 55 855 95 HOH HOH . Q 6 HOH A 56 856 31 HOH HOH . Q 6 HOH A 57 857 85 HOH HOH . Q 6 HOH A 58 858 110 HOH HOH . Q 6 HOH A 59 859 126 HOH HOH . Q 6 HOH A 60 860 78 HOH HOH . R 6 HOH B 1 801 114 HOH HOH . R 6 HOH B 2 802 41 HOH HOH . R 6 HOH B 3 803 57 HOH HOH . R 6 HOH B 4 804 43 HOH HOH . R 6 HOH B 5 805 26 HOH HOH . R 6 HOH B 6 806 48 HOH HOH . R 6 HOH B 7 807 23 HOH HOH . R 6 HOH B 8 808 58 HOH HOH . R 6 HOH B 9 809 69 HOH HOH . R 6 HOH B 10 810 42 HOH HOH . R 6 HOH B 11 811 108 HOH HOH . R 6 HOH B 12 812 901 HOH HOH . R 6 HOH B 13 813 72 HOH HOH . R 6 HOH B 14 814 65 HOH HOH . R 6 HOH B 15 815 44 HOH HOH . R 6 HOH B 16 816 99 HOH HOH . R 6 HOH B 17 817 73 HOH HOH . R 6 HOH B 18 818 16 HOH HOH . R 6 HOH B 19 819 67 HOH HOH . R 6 HOH B 20 820 20 HOH HOH . R 6 HOH B 21 821 118 HOH HOH . R 6 HOH B 22 822 15 HOH HOH . R 6 HOH B 23 823 1 HOH HOH . R 6 HOH B 24 824 113 HOH HOH . R 6 HOH B 25 825 103 HOH HOH . R 6 HOH B 26 826 47 HOH HOH . R 6 HOH B 27 827 39 HOH HOH . R 6 HOH B 28 828 27 HOH HOH . R 6 HOH B 29 829 17 HOH HOH . R 6 HOH B 30 830 81 HOH HOH . R 6 HOH B 31 831 97 HOH HOH . R 6 HOH B 32 832 34 HOH HOH . R 6 HOH B 33 833 70 HOH HOH . R 6 HOH B 34 834 123 HOH HOH . R 6 HOH B 35 835 25 HOH HOH . R 6 HOH B 36 836 61 HOH HOH . R 6 HOH B 37 837 117 HOH HOH . R 6 HOH B 38 838 36 HOH HOH . R 6 HOH B 39 839 82 HOH HOH . R 6 HOH B 40 840 116 HOH HOH . R 6 HOH B 41 841 77 HOH HOH . R 6 HOH B 42 842 62 HOH HOH . R 6 HOH B 43 843 56 HOH HOH . R 6 HOH B 44 844 19 HOH HOH . R 6 HOH B 45 845 60 HOH HOH . R 6 HOH B 46 846 37 HOH HOH . R 6 HOH B 47 847 18 HOH HOH . R 6 HOH B 48 848 79 HOH HOH . R 6 HOH B 49 849 87 HOH HOH . R 6 HOH B 50 850 66 HOH HOH . R 6 HOH B 51 851 21 HOH HOH . R 6 HOH B 52 852 112 HOH HOH . R 6 HOH B 53 853 121 HOH HOH . R 6 HOH B 54 854 124 HOH HOH . R 6 HOH B 55 855 111 HOH HOH . R 6 HOH B 56 856 71 HOH HOH . R 6 HOH B 57 857 52 HOH HOH . R 6 HOH B 58 858 24 HOH HOH . R 6 HOH B 59 859 51 HOH HOH . R 6 HOH B 60 860 22 HOH HOH . R 6 HOH B 61 861 68 HOH HOH . R 6 HOH B 62 862 125 HOH HOH . R 6 HOH B 63 863 80 HOH HOH . R 6 HOH B 64 864 122 HOH HOH . R 6 HOH B 65 865 107 HOH HOH . R 6 HOH B 66 866 46 HOH HOH . R 6 HOH B 67 867 106 HOH HOH . R 6 HOH B 68 868 105 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x 11.162 _atom_site.Cartn_y 11.776 _atom_site.Cartn_z -22.436 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 32.45 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 704 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 31 _model_server_stats.create_model_time_ms 37 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 1 #