data_6TX4 # _model_server_result.job_id G8rg091U6TG54NL2DmMxfA _model_server_result.datetime_utc '2024-11-05 00:53:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6tx4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":205}' # _entry.id 6TX4 # _exptl.entry_id 6TX4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 95.099 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1~{H}-pyridin-2-one _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6TX4 _cell.length_a 42.432 _cell.length_b 54.387 _cell.length_c 56.689 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6TX4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 33 A GLU 45 1_555 C NA NA . A NA 202 4_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.676 ? metalc ? metalc2 A O THR 34 A THR 46 1_555 C NA NA . A NA 202 4_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.751 ? metalc ? metalc3 A O THR 84 A THR 96 1_555 D NA NA . A NA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.72 ? metalc ? metalc4 A OE1 GLU 89 A GLU 101 1_555 D NA NA . A NA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.676 ? metalc ? metalc5 C NA NA . A NA 202 1_555 G O HOH . A HOH 321 4_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.795 ? metalc ? metalc6 C NA NA . A NA 202 1_555 G O HOH . A HOH 377 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.86 ? metalc ? metalc7 D NA NA . A NA 203 1_555 G O HOH . A HOH 455 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.635 ? # _chem_comp.formula 'C5 H5 N O' _chem_comp.formula_weight 95.099 _chem_comp.id HRZ _chem_comp.mon_nstd_flag . _chem_comp.name 1~{H}-pyridin-2-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 HRZ doub 152 n n C2 C3 HRZ sing 153 n n C2 N7 HRZ sing 154 n n C3 C4 HRZ doub 155 n n N7 C6 HRZ sing 156 n n C4 C5 HRZ sing 157 n n C6 C5 HRZ doub 158 n n C3 H8 HRZ sing 159 n n C5 H10 HRZ sing 160 n n C6 H11 HRZ sing 161 n n C4 H9 HRZ sing 162 n n N7 H12 HRZ sing 163 n n # _atom_sites.entry_id 6TX4 _atom_sites.fract_transf_matrix[1][1] 0.023567 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018387 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01764 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 201 1 CL CL . C 3 NA A 1 202 1 NA NA . D 3 NA A 1 203 2 NA NA . E 4 HRZ A 1 204 3 HRZ LIG . F 4 HRZ A 1 205 4 HRZ LIG . G 5 HOH A 1 301 164 HOH HOH . G 5 HOH A 2 302 218 HOH HOH . G 5 HOH A 3 303 181 HOH HOH . G 5 HOH A 4 304 117 HOH HOH . G 5 HOH A 5 305 200 HOH HOH . G 5 HOH A 6 306 154 HOH HOH . G 5 HOH A 7 307 16 HOH HOH . G 5 HOH A 8 308 168 HOH HOH . G 5 HOH A 9 309 184 HOH HOH . G 5 HOH A 10 310 82 HOH HOH . G 5 HOH A 11 311 65 HOH HOH . G 5 HOH A 12 312 195 HOH HOH . G 5 HOH A 13 313 135 HOH HOH . G 5 HOH A 14 314 76 HOH HOH . G 5 HOH A 15 315 66 HOH HOH . G 5 HOH A 16 316 70 HOH HOH . G 5 HOH A 17 317 27 HOH HOH . G 5 HOH A 18 318 91 HOH HOH . G 5 HOH A 19 319 40 HOH HOH . G 5 HOH A 20 320 220 HOH HOH . G 5 HOH A 21 321 17 HOH HOH . G 5 HOH A 22 322 179 HOH HOH . G 5 HOH A 23 323 42 HOH HOH . G 5 HOH A 24 324 75 HOH HOH . G 5 HOH A 25 325 11 HOH HOH . G 5 HOH A 26 326 47 HOH HOH . G 5 HOH A 27 327 34 HOH HOH . G 5 HOH A 28 328 39 HOH HOH . G 5 HOH A 29 329 141 HOH HOH . G 5 HOH A 30 330 18 HOH HOH . G 5 HOH A 31 331 72 HOH HOH . G 5 HOH A 32 332 64 HOH HOH . G 5 HOH A 33 333 126 HOH HOH . G 5 HOH A 34 334 53 HOH HOH . G 5 HOH A 35 335 21 HOH HOH . G 5 HOH A 36 336 58 HOH HOH . G 5 HOH A 37 337 25 HOH HOH . G 5 HOH A 38 338 5 HOH HOH . G 5 HOH A 39 339 28 HOH HOH . G 5 HOH A 40 340 43 HOH HOH . G 5 HOH A 41 341 13 HOH HOH . G 5 HOH A 42 342 57 HOH HOH . G 5 HOH A 43 343 221 HOH HOH . G 5 HOH A 44 344 81 HOH HOH . G 5 HOH A 45 345 29 HOH HOH . G 5 HOH A 46 346 12 HOH HOH . G 5 HOH A 47 347 8 HOH HOH . G 5 HOH A 48 348 35 HOH HOH . G 5 HOH A 49 349 3 HOH HOH . G 5 HOH A 50 350 113 HOH HOH . G 5 HOH A 51 351 125 HOH HOH . G 5 HOH A 52 352 55 HOH HOH . G 5 HOH A 53 353 71 HOH HOH . G 5 HOH A 54 354 56 HOH HOH . G 5 HOH A 55 355 14 HOH HOH . G 5 HOH A 56 356 151 HOH HOH . G 5 HOH A 57 357 121 HOH HOH . G 5 HOH A 58 358 30 HOH HOH . G 5 HOH A 59 359 133 HOH HOH . G 5 HOH A 60 360 23 HOH HOH . G 5 HOH A 61 361 74 HOH HOH . G 5 HOH A 62 362 26 HOH HOH . G 5 HOH A 63 363 80 HOH HOH . G 5 HOH A 64 364 124 HOH HOH . G 5 HOH A 65 365 36 HOH HOH . G 5 HOH A 66 366 54 HOH HOH . G 5 HOH A 67 367 22 HOH HOH . G 5 HOH A 68 368 134 HOH HOH . G 5 HOH A 69 369 33 HOH HOH . G 5 HOH A 70 370 68 HOH HOH . G 5 HOH A 71 371 138 HOH HOH . G 5 HOH A 72 372 79 HOH HOH . G 5 HOH A 73 373 60 HOH HOH . G 5 HOH A 74 374 131 HOH HOH . G 5 HOH A 75 375 116 HOH HOH . G 5 HOH A 76 376 45 HOH HOH . G 5 HOH A 77 377 157 HOH HOH . G 5 HOH A 78 378 115 HOH HOH . G 5 HOH A 79 379 67 HOH HOH . G 5 HOH A 80 380 4 HOH HOH . G 5 HOH A 81 381 114 HOH HOH . G 5 HOH A 82 382 1 HOH HOH . G 5 HOH A 83 383 9 HOH HOH . G 5 HOH A 84 384 49 HOH HOH . G 5 HOH A 85 385 119 HOH HOH . G 5 HOH A 86 386 2 HOH HOH . G 5 HOH A 87 387 15 HOH HOH . G 5 HOH A 88 388 62 HOH HOH . G 5 HOH A 89 389 10 HOH HOH . G 5 HOH A 90 390 19 HOH HOH . G 5 HOH A 91 391 123 HOH HOH . G 5 HOH A 92 392 20 HOH HOH . G 5 HOH A 93 393 182 HOH HOH . G 5 HOH A 94 394 139 HOH HOH . G 5 HOH A 95 395 127 HOH HOH . G 5 HOH A 96 396 7 HOH HOH . G 5 HOH A 97 397 201 HOH HOH . G 5 HOH A 98 398 180 HOH HOH . G 5 HOH A 99 399 177 HOH HOH . G 5 HOH A 100 400 24 HOH HOH . G 5 HOH A 101 401 32 HOH HOH . G 5 HOH A 102 402 51 HOH HOH . G 5 HOH A 103 403 37 HOH HOH . G 5 HOH A 104 404 165 HOH HOH . G 5 HOH A 105 405 38 HOH HOH . G 5 HOH A 106 406 136 HOH HOH . G 5 HOH A 107 407 44 HOH HOH . G 5 HOH A 108 408 120 HOH HOH . G 5 HOH A 109 409 222 HOH HOH . G 5 HOH A 110 410 52 HOH HOH . G 5 HOH A 111 411 46 HOH HOH . G 5 HOH A 112 412 6 HOH HOH . G 5 HOH A 113 413 183 HOH HOH . G 5 HOH A 114 414 31 HOH HOH . G 5 HOH A 115 415 130 HOH HOH . G 5 HOH A 116 416 194 HOH HOH . G 5 HOH A 117 417 50 HOH HOH . G 5 HOH A 118 418 112 HOH HOH . G 5 HOH A 119 419 144 HOH HOH . G 5 HOH A 120 420 63 HOH HOH . G 5 HOH A 121 421 142 HOH HOH . G 5 HOH A 122 422 69 HOH HOH . G 5 HOH A 123 423 118 HOH HOH . G 5 HOH A 124 424 41 HOH HOH . G 5 HOH A 125 425 59 HOH HOH . G 5 HOH A 126 426 73 HOH HOH . G 5 HOH A 127 427 132 HOH HOH . G 5 HOH A 128 428 176 HOH HOH . G 5 HOH A 129 429 61 HOH HOH . G 5 HOH A 130 430 150 HOH HOH . G 5 HOH A 131 431 188 HOH HOH . G 5 HOH A 132 432 48 HOH HOH . G 5 HOH A 133 433 149 HOH HOH . G 5 HOH A 134 434 153 HOH HOH . G 5 HOH A 135 435 160 HOH HOH . G 5 HOH A 136 436 170 HOH HOH . G 5 HOH A 137 437 172 HOH HOH . G 5 HOH A 138 438 137 HOH HOH . G 5 HOH A 139 439 178 HOH HOH . G 5 HOH A 140 440 148 HOH HOH . G 5 HOH A 141 441 98 HOH HOH . G 5 HOH A 142 442 173 HOH HOH . G 5 HOH A 143 443 193 HOH HOH . G 5 HOH A 144 444 185 HOH HOH . G 5 HOH A 145 445 122 HOH HOH . G 5 HOH A 146 446 158 HOH HOH . G 5 HOH A 147 447 217 HOH HOH . G 5 HOH A 148 448 210 HOH HOH . G 5 HOH A 149 449 206 HOH HOH . G 5 HOH A 150 450 140 HOH HOH . G 5 HOH A 151 451 105 HOH HOH . G 5 HOH A 152 452 85 HOH HOH . G 5 HOH A 153 453 84 HOH HOH . G 5 HOH A 154 454 213 HOH HOH . G 5 HOH A 155 455 96 HOH HOH . G 5 HOH A 156 456 199 HOH HOH . G 5 HOH A 157 457 208 HOH HOH . G 5 HOH A 158 458 219 HOH HOH . G 5 HOH A 159 459 166 HOH HOH . G 5 HOH A 160 460 204 HOH HOH . G 5 HOH A 161 461 155 HOH HOH . G 5 HOH A 162 462 87 HOH HOH . G 5 HOH A 163 463 212 HOH HOH . G 5 HOH A 164 464 78 HOH HOH . G 5 HOH A 165 465 152 HOH HOH . G 5 HOH A 166 466 86 HOH HOH . G 5 HOH A 167 467 108 HOH HOH . G 5 HOH A 168 468 97 HOH HOH . G 5 HOH A 169 469 162 HOH HOH . G 5 HOH A 170 470 169 HOH HOH . G 5 HOH A 171 471 192 HOH HOH . G 5 HOH A 172 472 102 HOH HOH . G 5 HOH A 173 473 145 HOH HOH . G 5 HOH A 174 474 93 HOH HOH . G 5 HOH A 175 475 223 HOH HOH . G 5 HOH A 176 476 129 HOH HOH . G 5 HOH A 177 477 191 HOH HOH . G 5 HOH A 178 478 104 HOH HOH . G 5 HOH A 179 479 99 HOH HOH . G 5 HOH A 180 480 202 HOH HOH . G 5 HOH A 181 481 186 HOH HOH . G 5 HOH A 182 482 147 HOH HOH . G 5 HOH A 183 483 146 HOH HOH . G 5 HOH A 184 484 143 HOH HOH . G 5 HOH A 185 485 83 HOH HOH . G 5 HOH A 186 486 174 HOH HOH . G 5 HOH A 187 487 95 HOH HOH . G 5 HOH A 188 488 215 HOH HOH . G 5 HOH A 189 489 92 HOH HOH . G 5 HOH A 190 490 109 HOH HOH . G 5 HOH A 191 491 161 HOH HOH . G 5 HOH A 192 492 167 HOH HOH . G 5 HOH A 193 493 128 HOH HOH . G 5 HOH A 194 494 101 HOH HOH . G 5 HOH A 195 495 77 HOH HOH . G 5 HOH A 196 496 163 HOH HOH . G 5 HOH A 197 497 100 HOH HOH . G 5 HOH A 198 498 207 HOH HOH . G 5 HOH A 199 499 103 HOH HOH . G 5 HOH A 200 500 90 HOH HOH . G 5 HOH A 201 501 89 HOH HOH . G 5 HOH A 202 502 106 HOH HOH . G 5 HOH A 203 503 175 HOH HOH . G 5 HOH A 204 504 156 HOH HOH . G 5 HOH A 205 505 88 HOH HOH . G 5 HOH A 206 506 94 HOH HOH . G 5 HOH A 207 507 189 HOH HOH . G 5 HOH A 208 508 190 HOH HOH . G 5 HOH A 209 509 110 HOH HOH . G 5 HOH A 210 510 203 HOH HOH . G 5 HOH A 211 511 196 HOH HOH . G 5 HOH A 212 512 205 HOH HOH . G 5 HOH A 213 513 211 HOH HOH . G 5 HOH A 214 514 198 HOH HOH . G 5 HOH A 215 515 171 HOH HOH . G 5 HOH A 216 516 107 HOH HOH . G 5 HOH A 217 517 216 HOH HOH . G 5 HOH A 218 518 159 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 HRZ . . . F 4 18 -14.695 1.369 0.82 13.13 ? C2 HRZ 205 A 1 HETATM 2 C C3 HRZ . . . F 4 17.775 -13.478 2.072 0.82 13.04 ? C3 HRZ 205 A 1 HETATM 3 C C5 HRZ . . . F 4 18.007 -12.219 0.028 0.82 14.27 ? C5 HRZ 205 A 1 HETATM 4 C C6 HRZ . . . F 4 18.222 -13.374 -0.642 0.82 14.95 ? C6 HRZ 205 A 1 HETATM 5 O O1 HRZ . . . F 4 18.008 -15.82 1.881 0.82 14.74 -1 O1 HRZ 205 A 1 HETATM 6 C C4 HRZ . . . F 4 17.786 -12.28 1.416 0.82 13.72 ? C4 HRZ 205 A 1 HETATM 7 N N7 HRZ . . . F 4 18.224 -14.566 0.018 0.82 14.27 ? N7 HRZ 205 A 1 HETATM 8 H H8 HRZ . . . F 4 17.596 -13.551 3.144 0.82 15.65 ? H8 HRZ 205 A 1 HETATM 9 H H10 HRZ . . . F 4 18.005 -11.259 -0.486 0.82 17.13 ? H10 HRZ 205 A 1 HETATM 10 H H11 HRZ . . . F 4 18.398 -13.395 -1.717 0.82 17.94 ? H11 HRZ 205 A 1 HETATM 11 H H9 HRZ . . . F 4 17.623 -11.352 1.961 0.82 16.47 ? H9 HRZ 205 A 1 HETATM 12 H H12 HRZ . . . F 4 18.401 -15.41 -0.518 0.82 17.13 ? H12 HRZ 205 A 1 # _model_server_stats.io_time_ms 73 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 219 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 12 #