data_6TX4
#
_model_server_result.job_id            uyyYpQldGgzocX8sFUA6zQ 
_model_server_result.datetime_utc      '2024-11-26 19:37:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6tx4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":205}' 
#
_entry.id    6TX4 
#
_exptl.entry_id    6TX4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              95.099 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1~{H}-pyridin-2-one 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6TX4 
_cell.length_a            42.432 
_cell.length_b            54.387 
_cell.length_c            56.689 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6TX4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    'P 2ac 2ab' 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE2 GLU 33 A GLU 45 1_555 C NA NA . A NA 202 4_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.676 ? 
metalc ? metalc2 A O THR 34 A THR 46 1_555 C NA NA . A NA 202 4_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.751 ? 
metalc ? metalc3 A O THR 84 A THR 96 1_555 D NA NA . A NA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.72 ? 
metalc ? metalc4 A OE1 GLU 89 A GLU 101 1_555 D NA NA . A NA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.676 ? 
metalc ? metalc5 C NA NA . A NA 202 1_555 G O HOH . A HOH 321 4_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.795 ? 
metalc ? metalc6 C NA NA . A NA 202 1_555 G O HOH . A HOH 377 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.86 ? 
metalc ? metalc7 D NA NA . A NA 203 1_555 G O HOH . A HOH 455 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.635 ? 
#
_chem_comp.formula           'C5 H5 N O' 
_chem_comp.formula_weight    95.099 
_chem_comp.id                HRZ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1~{H}-pyridin-2-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 C2 HRZ doub 152 n n 
C2 C3 HRZ sing 153 n n 
C2 N7 HRZ sing 154 n n 
C3 C4 HRZ doub 155 n n 
N7 C6 HRZ sing 156 n n 
C4 C5 HRZ sing 157 n n 
C6 C5 HRZ doub 158 n n 
C3 H8 HRZ sing 159 n n 
C5 H10 HRZ sing 160 n n 
C6 H11 HRZ sing 161 n n 
C4 H9 HRZ sing 162 n n 
N7 H12 HRZ sing 163 n n 
#
_atom_sites.entry_id                     6TX4 
_atom_sites.fract_transf_matrix[1][1]    0.023567 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018387 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01764 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CL A 1 201 1 CL CL . 
C 3 NA A 1 202 1 NA NA . 
D 3 NA A 1 203 2 NA NA . 
E 4 HRZ A 1 204 3 HRZ LIG . 
F 4 HRZ A 1 205 4 HRZ LIG . 
G 5 HOH A 1 301 164 HOH HOH . 
G 5 HOH A 2 302 218 HOH HOH . 
G 5 HOH A 3 303 181 HOH HOH . 
G 5 HOH A 4 304 117 HOH HOH . 
G 5 HOH A 5 305 200 HOH HOH . 
G 5 HOH A 6 306 154 HOH HOH . 
G 5 HOH A 7 307 16 HOH HOH . 
G 5 HOH A 8 308 168 HOH HOH . 
G 5 HOH A 9 309 184 HOH HOH . 
G 5 HOH A 10 310 82 HOH HOH . 
G 5 HOH A 11 311 65 HOH HOH . 
G 5 HOH A 12 312 195 HOH HOH . 
G 5 HOH A 13 313 135 HOH HOH . 
G 5 HOH A 14 314 76 HOH HOH . 
G 5 HOH A 15 315 66 HOH HOH . 
G 5 HOH A 16 316 70 HOH HOH . 
G 5 HOH A 17 317 27 HOH HOH . 
G 5 HOH A 18 318 91 HOH HOH . 
G 5 HOH A 19 319 40 HOH HOH . 
G 5 HOH A 20 320 220 HOH HOH . 
G 5 HOH A 21 321 17 HOH HOH . 
G 5 HOH A 22 322 179 HOH HOH . 
G 5 HOH A 23 323 42 HOH HOH . 
G 5 HOH A 24 324 75 HOH HOH . 
G 5 HOH A 25 325 11 HOH HOH . 
G 5 HOH A 26 326 47 HOH HOH . 
G 5 HOH A 27 327 34 HOH HOH . 
G 5 HOH A 28 328 39 HOH HOH . 
G 5 HOH A 29 329 141 HOH HOH . 
G 5 HOH A 30 330 18 HOH HOH . 
G 5 HOH A 31 331 72 HOH HOH . 
G 5 HOH A 32 332 64 HOH HOH . 
G 5 HOH A 33 333 126 HOH HOH . 
G 5 HOH A 34 334 53 HOH HOH . 
G 5 HOH A 35 335 21 HOH HOH . 
G 5 HOH A 36 336 58 HOH HOH . 
G 5 HOH A 37 337 25 HOH HOH . 
G 5 HOH A 38 338 5 HOH HOH . 
G 5 HOH A 39 339 28 HOH HOH . 
G 5 HOH A 40 340 43 HOH HOH . 
G 5 HOH A 41 341 13 HOH HOH . 
G 5 HOH A 42 342 57 HOH HOH . 
G 5 HOH A 43 343 221 HOH HOH . 
G 5 HOH A 44 344 81 HOH HOH . 
G 5 HOH A 45 345 29 HOH HOH . 
G 5 HOH A 46 346 12 HOH HOH . 
G 5 HOH A 47 347 8 HOH HOH . 
G 5 HOH A 48 348 35 HOH HOH . 
G 5 HOH A 49 349 3 HOH HOH . 
G 5 HOH A 50 350 113 HOH HOH . 
G 5 HOH A 51 351 125 HOH HOH . 
G 5 HOH A 52 352 55 HOH HOH . 
G 5 HOH A 53 353 71 HOH HOH . 
G 5 HOH A 54 354 56 HOH HOH . 
G 5 HOH A 55 355 14 HOH HOH . 
G 5 HOH A 56 356 151 HOH HOH . 
G 5 HOH A 57 357 121 HOH HOH . 
G 5 HOH A 58 358 30 HOH HOH . 
G 5 HOH A 59 359 133 HOH HOH . 
G 5 HOH A 60 360 23 HOH HOH . 
G 5 HOH A 61 361 74 HOH HOH . 
G 5 HOH A 62 362 26 HOH HOH . 
G 5 HOH A 63 363 80 HOH HOH . 
G 5 HOH A 64 364 124 HOH HOH . 
G 5 HOH A 65 365 36 HOH HOH . 
G 5 HOH A 66 366 54 HOH HOH . 
G 5 HOH A 67 367 22 HOH HOH . 
G 5 HOH A 68 368 134 HOH HOH . 
G 5 HOH A 69 369 33 HOH HOH . 
G 5 HOH A 70 370 68 HOH HOH . 
G 5 HOH A 71 371 138 HOH HOH . 
G 5 HOH A 72 372 79 HOH HOH . 
G 5 HOH A 73 373 60 HOH HOH . 
G 5 HOH A 74 374 131 HOH HOH . 
G 5 HOH A 75 375 116 HOH HOH . 
G 5 HOH A 76 376 45 HOH HOH . 
G 5 HOH A 77 377 157 HOH HOH . 
G 5 HOH A 78 378 115 HOH HOH . 
G 5 HOH A 79 379 67 HOH HOH . 
G 5 HOH A 80 380 4 HOH HOH . 
G 5 HOH A 81 381 114 HOH HOH . 
G 5 HOH A 82 382 1 HOH HOH . 
G 5 HOH A 83 383 9 HOH HOH . 
G 5 HOH A 84 384 49 HOH HOH . 
G 5 HOH A 85 385 119 HOH HOH . 
G 5 HOH A 86 386 2 HOH HOH . 
G 5 HOH A 87 387 15 HOH HOH . 
G 5 HOH A 88 388 62 HOH HOH . 
G 5 HOH A 89 389 10 HOH HOH . 
G 5 HOH A 90 390 19 HOH HOH . 
G 5 HOH A 91 391 123 HOH HOH . 
G 5 HOH A 92 392 20 HOH HOH . 
G 5 HOH A 93 393 182 HOH HOH . 
G 5 HOH A 94 394 139 HOH HOH . 
G 5 HOH A 95 395 127 HOH HOH . 
G 5 HOH A 96 396 7 HOH HOH . 
G 5 HOH A 97 397 201 HOH HOH . 
G 5 HOH A 98 398 180 HOH HOH . 
G 5 HOH A 99 399 177 HOH HOH . 
G 5 HOH A 100 400 24 HOH HOH . 
G 5 HOH A 101 401 32 HOH HOH . 
G 5 HOH A 102 402 51 HOH HOH . 
G 5 HOH A 103 403 37 HOH HOH . 
G 5 HOH A 104 404 165 HOH HOH . 
G 5 HOH A 105 405 38 HOH HOH . 
G 5 HOH A 106 406 136 HOH HOH . 
G 5 HOH A 107 407 44 HOH HOH . 
G 5 HOH A 108 408 120 HOH HOH . 
G 5 HOH A 109 409 222 HOH HOH . 
G 5 HOH A 110 410 52 HOH HOH . 
G 5 HOH A 111 411 46 HOH HOH . 
G 5 HOH A 112 412 6 HOH HOH . 
G 5 HOH A 113 413 183 HOH HOH . 
G 5 HOH A 114 414 31 HOH HOH . 
G 5 HOH A 115 415 130 HOH HOH . 
G 5 HOH A 116 416 194 HOH HOH . 
G 5 HOH A 117 417 50 HOH HOH . 
G 5 HOH A 118 418 112 HOH HOH . 
G 5 HOH A 119 419 144 HOH HOH . 
G 5 HOH A 120 420 63 HOH HOH . 
G 5 HOH A 121 421 142 HOH HOH . 
G 5 HOH A 122 422 69 HOH HOH . 
G 5 HOH A 123 423 118 HOH HOH . 
G 5 HOH A 124 424 41 HOH HOH . 
G 5 HOH A 125 425 59 HOH HOH . 
G 5 HOH A 126 426 73 HOH HOH . 
G 5 HOH A 127 427 132 HOH HOH . 
G 5 HOH A 128 428 176 HOH HOH . 
G 5 HOH A 129 429 61 HOH HOH . 
G 5 HOH A 130 430 150 HOH HOH . 
G 5 HOH A 131 431 188 HOH HOH . 
G 5 HOH A 132 432 48 HOH HOH . 
G 5 HOH A 133 433 149 HOH HOH . 
G 5 HOH A 134 434 153 HOH HOH . 
G 5 HOH A 135 435 160 HOH HOH . 
G 5 HOH A 136 436 170 HOH HOH . 
G 5 HOH A 137 437 172 HOH HOH . 
G 5 HOH A 138 438 137 HOH HOH . 
G 5 HOH A 139 439 178 HOH HOH . 
G 5 HOH A 140 440 148 HOH HOH . 
G 5 HOH A 141 441 98 HOH HOH . 
G 5 HOH A 142 442 173 HOH HOH . 
G 5 HOH A 143 443 193 HOH HOH . 
G 5 HOH A 144 444 185 HOH HOH . 
G 5 HOH A 145 445 122 HOH HOH . 
G 5 HOH A 146 446 158 HOH HOH . 
G 5 HOH A 147 447 217 HOH HOH . 
G 5 HOH A 148 448 210 HOH HOH . 
G 5 HOH A 149 449 206 HOH HOH . 
G 5 HOH A 150 450 140 HOH HOH . 
G 5 HOH A 151 451 105 HOH HOH . 
G 5 HOH A 152 452 85 HOH HOH . 
G 5 HOH A 153 453 84 HOH HOH . 
G 5 HOH A 154 454 213 HOH HOH . 
G 5 HOH A 155 455 96 HOH HOH . 
G 5 HOH A 156 456 199 HOH HOH . 
G 5 HOH A 157 457 208 HOH HOH . 
G 5 HOH A 158 458 219 HOH HOH . 
G 5 HOH A 159 459 166 HOH HOH . 
G 5 HOH A 160 460 204 HOH HOH . 
G 5 HOH A 161 461 155 HOH HOH . 
G 5 HOH A 162 462 87 HOH HOH . 
G 5 HOH A 163 463 212 HOH HOH . 
G 5 HOH A 164 464 78 HOH HOH . 
G 5 HOH A 165 465 152 HOH HOH . 
G 5 HOH A 166 466 86 HOH HOH . 
G 5 HOH A 167 467 108 HOH HOH . 
G 5 HOH A 168 468 97 HOH HOH . 
G 5 HOH A 169 469 162 HOH HOH . 
G 5 HOH A 170 470 169 HOH HOH . 
G 5 HOH A 171 471 192 HOH HOH . 
G 5 HOH A 172 472 102 HOH HOH . 
G 5 HOH A 173 473 145 HOH HOH . 
G 5 HOH A 174 474 93 HOH HOH . 
G 5 HOH A 175 475 223 HOH HOH . 
G 5 HOH A 176 476 129 HOH HOH . 
G 5 HOH A 177 477 191 HOH HOH . 
G 5 HOH A 178 478 104 HOH HOH . 
G 5 HOH A 179 479 99 HOH HOH . 
G 5 HOH A 180 480 202 HOH HOH . 
G 5 HOH A 181 481 186 HOH HOH . 
G 5 HOH A 182 482 147 HOH HOH . 
G 5 HOH A 183 483 146 HOH HOH . 
G 5 HOH A 184 484 143 HOH HOH . 
G 5 HOH A 185 485 83 HOH HOH . 
G 5 HOH A 186 486 174 HOH HOH . 
G 5 HOH A 187 487 95 HOH HOH . 
G 5 HOH A 188 488 215 HOH HOH . 
G 5 HOH A 189 489 92 HOH HOH . 
G 5 HOH A 190 490 109 HOH HOH . 
G 5 HOH A 191 491 161 HOH HOH . 
G 5 HOH A 192 492 167 HOH HOH . 
G 5 HOH A 193 493 128 HOH HOH . 
G 5 HOH A 194 494 101 HOH HOH . 
G 5 HOH A 195 495 77 HOH HOH . 
G 5 HOH A 196 496 163 HOH HOH . 
G 5 HOH A 197 497 100 HOH HOH . 
G 5 HOH A 198 498 207 HOH HOH . 
G 5 HOH A 199 499 103 HOH HOH . 
G 5 HOH A 200 500 90 HOH HOH . 
G 5 HOH A 201 501 89 HOH HOH . 
G 5 HOH A 202 502 106 HOH HOH . 
G 5 HOH A 203 503 175 HOH HOH . 
G 5 HOH A 204 504 156 HOH HOH . 
G 5 HOH A 205 505 88 HOH HOH . 
G 5 HOH A 206 506 94 HOH HOH . 
G 5 HOH A 207 507 189 HOH HOH . 
G 5 HOH A 208 508 190 HOH HOH . 
G 5 HOH A 209 509 110 HOH HOH . 
G 5 HOH A 210 510 203 HOH HOH . 
G 5 HOH A 211 511 196 HOH HOH . 
G 5 HOH A 212 512 205 HOH HOH . 
G 5 HOH A 213 513 211 HOH HOH . 
G 5 HOH A 214 514 198 HOH HOH . 
G 5 HOH A 215 515 171 HOH HOH . 
G 5 HOH A 216 516 107 HOH HOH . 
G 5 HOH A 217 517 216 HOH HOH . 
G 5 HOH A 218 518 159 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C2 HRZ . . . F 4 18 -14.695 1.369 0.82 13.13 ? C2 HRZ 205 A 1 
HETATM 2 C C3 HRZ . . . F 4 17.775 -13.478 2.072 0.82 13.04 ? C3 HRZ 205 A 1 
HETATM 3 C C5 HRZ . . . F 4 18.007 -12.219 0.028 0.82 14.27 ? C5 HRZ 205 A 1 
HETATM 4 C C6 HRZ . . . F 4 18.222 -13.374 -0.642 0.82 14.95 ? C6 HRZ 205 A 1 
HETATM 5 O O1 HRZ . . . F 4 18.008 -15.82 1.881 0.82 14.74 -1 O1 HRZ 205 A 1 
HETATM 6 C C4 HRZ . . . F 4 17.786 -12.28 1.416 0.82 13.72 ? C4 HRZ 205 A 1 
HETATM 7 N N7 HRZ . . . F 4 18.224 -14.566 0.018 0.82 14.27 ? N7 HRZ 205 A 1 
HETATM 8 H H8 HRZ . . . F 4 17.596 -13.551 3.144 0.82 15.65 ? H8 HRZ 205 A 1 
HETATM 9 H H10 HRZ . . . F 4 18.005 -11.259 -0.486 0.82 17.13 ? H10 HRZ 205 A 1 
HETATM 10 H H11 HRZ . . . F 4 18.398 -13.395 -1.717 0.82 17.94 ? H11 HRZ 205 A 1 
HETATM 11 H H9 HRZ . . . F 4 17.623 -11.352 1.961 0.82 16.47 ? H9 HRZ 205 A 1 
HETATM 12 H H12 HRZ . . . F 4 18.401 -15.41 -0.518 0.82 17.13 ? H12 HRZ 205 A 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           19 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           266 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           12 
#