data_6TYJ # _model_server_result.job_id xa72bHWdbLEIJB9kTvbiQw _model_server_result.datetime_utc '2024-12-04 07:55:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6tyj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 6TYJ # _exptl.entry_id 6TYJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6TYJ _cell.length_a 52.23 _cell.length_b 52.23 _cell.length_c 104.65 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6TYJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall 'P 31 2"' _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 20 A HIS 11 1_555 B ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc2 A OE2 GLU 46 A GLU 37 1_555 E ZN ZN . A ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.536 ? metalc ? metalc3 A NE2 HIS 54 A HIS 45 1_555 B ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? metalc ? metalc4 A OE2 GLU 58 A GLU 49 1_555 B ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.928 ? metalc ? metalc5 A OE1 GLU 58 A GLU 49 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? metalc ? metalc6 A OD2 ASP 59 A ASP 50 1_555 D ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.959 ? metalc ? metalc7 A NE2 HIS 80 A HIS 71 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? metalc ? metalc8 A ND1 HIS 80 A HIS 71 1_555 D ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? metalc ? metalc9 A NE2 HIS 114 A HIS 105 1_555 B ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? metalc ? metalc10 A ND1 HIS 114 A HIS 105 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.629 ? metalc ? metalc11 A OE2 GLU 118 A GLU 109 1_555 B ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? metalc ? metalc12 C ZN ZN . A ZN 301 1_555 F O HOH . A HOH 430 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.626 ? metalc ? metalc13 D ZN ZN . A ZN 302 1_555 F O HOH . A HOH 495 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? metalc ? metalc14 D ZN ZN . A ZN 302 1_555 F O HOH . A HOH 515 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.911 ? metalc ? metalc15 E ZN ZN . A ZN 303 1_555 F O HOH . A HOH 442 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? metalc ? metalc16 E ZN ZN . A ZN 303 1_555 F O HOH . A HOH 518 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.024 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6TYJ _atom_sites.fract_transf_matrix[1][1] 0.019146 _atom_sites.fract_transf_matrix[1][2] 0.011054 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022108 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009556 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 300 300 ZN ZN . C 2 ZN A 1 301 301 ZN ZN . D 2 ZN A 1 302 302 ZN ZN . E 2 ZN A 1 303 303 ZN ZN . F 3 HOH A 1 401 131 HOH HOH . F 3 HOH A 2 402 5 HOH HOH . F 3 HOH A 3 403 8 HOH HOH . F 3 HOH A 4 404 49 HOH HOH . F 3 HOH A 5 405 113 HOH HOH . F 3 HOH A 6 406 164 HOH HOH . F 3 HOH A 7 407 166 HOH HOH . F 3 HOH A 8 408 117 HOH HOH . F 3 HOH A 9 409 70 HOH HOH . F 3 HOH A 10 410 52 HOH HOH . F 3 HOH A 11 411 93 HOH HOH . F 3 HOH A 12 412 46 HOH HOH . F 3 HOH A 13 413 80 HOH HOH . F 3 HOH A 14 414 53 HOH HOH . F 3 HOH A 15 415 169 HOH HOH . F 3 HOH A 16 416 34 HOH HOH . F 3 HOH A 17 417 67 HOH HOH . F 3 HOH A 18 418 66 HOH HOH . F 3 HOH A 19 419 161 HOH HOH . F 3 HOH A 20 420 11 HOH HOH . F 3 HOH A 21 421 89 HOH HOH . F 3 HOH A 22 422 98 HOH HOH . F 3 HOH A 23 423 170 HOH HOH . F 3 HOH A 24 424 2 HOH HOH . F 3 HOH A 25 425 44 HOH HOH . F 3 HOH A 26 426 174 HOH HOH . F 3 HOH A 27 427 183 HOH HOH . F 3 HOH A 28 428 189 HOH HOH . F 3 HOH A 29 429 55 HOH HOH . F 3 HOH A 30 430 37 HOH HOH . F 3 HOH A 31 431 119 HOH HOH . F 3 HOH A 32 432 40 HOH HOH . F 3 HOH A 33 433 74 HOH HOH . F 3 HOH A 34 434 87 HOH HOH . F 3 HOH A 35 435 42 HOH HOH . F 3 HOH A 36 436 148 HOH HOH . F 3 HOH A 37 437 108 HOH HOH . F 3 HOH A 38 438 17 HOH HOH . F 3 HOH A 39 439 155 HOH HOH . F 3 HOH A 40 440 9 HOH HOH . F 3 HOH A 41 441 59 HOH HOH . F 3 HOH A 42 442 159 HOH HOH . F 3 HOH A 43 443 19 HOH HOH . F 3 HOH A 44 444 30 HOH HOH . F 3 HOH A 45 445 41 HOH HOH . F 3 HOH A 46 446 129 HOH HOH . F 3 HOH A 47 447 29 HOH HOH . F 3 HOH A 48 448 115 HOH HOH . F 3 HOH A 49 449 31 HOH HOH . F 3 HOH A 50 450 82 HOH HOH . F 3 HOH A 51 451 14 HOH HOH . F 3 HOH A 52 452 123 HOH HOH . F 3 HOH A 53 453 28 HOH HOH . F 3 HOH A 54 454 15 HOH HOH . F 3 HOH A 55 455 18 HOH HOH . F 3 HOH A 56 456 13 HOH HOH . F 3 HOH A 57 457 57 HOH HOH . F 3 HOH A 58 458 43 HOH HOH . F 3 HOH A 59 459 24 HOH HOH . F 3 HOH A 60 460 173 HOH HOH . F 3 HOH A 61 461 125 HOH HOH . F 3 HOH A 62 462 25 HOH HOH . F 3 HOH A 63 463 144 HOH HOH . F 3 HOH A 64 464 128 HOH HOH . F 3 HOH A 65 465 38 HOH HOH . F 3 HOH A 66 466 186 HOH HOH . F 3 HOH A 67 467 39 HOH HOH . F 3 HOH A 68 468 127 HOH HOH . F 3 HOH A 69 469 107 HOH HOH . F 3 HOH A 70 470 72 HOH HOH . F 3 HOH A 71 471 69 HOH HOH . F 3 HOH A 72 472 50 HOH HOH . F 3 HOH A 73 473 157 HOH HOH . F 3 HOH A 74 474 3 HOH HOH . F 3 HOH A 75 475 136 HOH HOH . F 3 HOH A 76 476 68 HOH HOH . F 3 HOH A 77 477 36 HOH HOH . F 3 HOH A 78 478 152 HOH HOH . F 3 HOH A 79 479 167 HOH HOH . F 3 HOH A 80 480 61 HOH HOH . F 3 HOH A 81 481 58 HOH HOH . F 3 HOH A 82 482 114 HOH HOH . F 3 HOH A 83 483 10 HOH HOH . F 3 HOH A 84 484 181 HOH HOH . F 3 HOH A 85 485 12 HOH HOH . F 3 HOH A 86 486 64 HOH HOH . F 3 HOH A 87 487 142 HOH HOH . F 3 HOH A 88 488 23 HOH HOH . F 3 HOH A 89 489 20 HOH HOH . F 3 HOH A 90 490 103 HOH HOH . F 3 HOH A 91 491 54 HOH HOH . F 3 HOH A 92 492 137 HOH HOH . F 3 HOH A 93 493 153 HOH HOH . F 3 HOH A 94 494 146 HOH HOH . F 3 HOH A 95 495 86 HOH HOH . F 3 HOH A 96 496 104 HOH HOH . F 3 HOH A 97 497 35 HOH HOH . F 3 HOH A 98 498 109 HOH HOH . F 3 HOH A 99 499 176 HOH HOH . F 3 HOH A 100 500 154 HOH HOH . F 3 HOH A 101 501 32 HOH HOH . F 3 HOH A 102 502 140 HOH HOH . F 3 HOH A 103 503 62 HOH HOH . F 3 HOH A 104 504 158 HOH HOH . F 3 HOH A 105 505 139 HOH HOH . F 3 HOH A 106 506 133 HOH HOH . F 3 HOH A 107 507 101 HOH HOH . F 3 HOH A 108 508 160 HOH HOH . F 3 HOH A 109 509 191 HOH HOH . F 3 HOH A 110 510 168 HOH HOH . F 3 HOH A 111 511 124 HOH HOH . F 3 HOH A 112 512 51 HOH HOH . F 3 HOH A 113 513 178 HOH HOH . F 3 HOH A 114 514 150 HOH HOH . F 3 HOH A 115 515 85 HOH HOH . F 3 HOH A 116 516 163 HOH HOH . F 3 HOH A 117 517 177 HOH HOH . F 3 HOH A 118 518 60 HOH HOH . F 3 HOH A 119 519 71 HOH HOH . F 3 HOH A 120 520 145 HOH HOH . F 3 HOH A 121 521 184 HOH HOH . F 3 HOH A 122 522 27 HOH HOH . F 3 HOH A 123 523 188 HOH HOH . F 3 HOH A 124 524 105 HOH HOH . F 3 HOH A 125 525 116 HOH HOH . F 3 HOH A 126 526 121 HOH HOH . F 3 HOH A 127 527 22 HOH HOH . F 3 HOH A 128 528 91 HOH HOH . F 3 HOH A 129 529 88 HOH HOH . F 3 HOH A 130 530 99 HOH HOH . F 3 HOH A 131 531 151 HOH HOH . F 3 HOH A 132 532 182 HOH HOH . F 3 HOH A 133 533 97 HOH HOH . F 3 HOH A 134 534 135 HOH HOH . F 3 HOH A 135 535 26 HOH HOH . F 3 HOH A 136 536 95 HOH HOH . F 3 HOH A 137 537 190 HOH HOH . F 3 HOH A 138 538 149 HOH HOH . F 3 HOH A 139 539 118 HOH HOH . F 3 HOH A 140 540 162 HOH HOH . F 3 HOH A 141 541 45 HOH HOH . F 3 HOH A 142 542 134 HOH HOH . F 3 HOH A 143 543 187 HOH HOH . F 3 HOH A 144 544 179 HOH HOH . F 3 HOH A 145 545 102 HOH HOH . F 3 HOH A 146 546 120 HOH HOH . F 3 HOH A 147 547 172 HOH HOH . F 3 HOH A 148 548 16 HOH HOH . F 3 HOH A 149 549 77 HOH HOH . F 3 HOH A 150 550 48 HOH HOH . F 3 HOH A 151 551 156 HOH HOH . F 3 HOH A 152 552 7 HOH HOH . F 3 HOH A 153 553 185 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x -4.572 _atom_site.Cartn_y 41.665 _atom_site.Cartn_z -4.16 _atom_site.occupancy 0.58 _atom_site.B_iso_or_equiv 16.41 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 302 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 231 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #