data_6TYP # _model_server_result.job_id XAs0uxAlssBAXcSX8DWydg _model_server_result.datetime_utc '2025-01-11 03:59:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6typ # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":801}' # _entry.id 6TYP # _exptl.entry_id 6TYP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.025 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FORMIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.81 _cell.angle_gamma 90 _cell.entry_id 6TYP _cell.length_a 125.792 _cell.length_b 75.679 _cell.length_c 48.648 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6TYP _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 118 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 434 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 118 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 434 _struct_conn.ptnr2_symmetry 2_556 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.025 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C H2 O2' _chem_comp.formula_weight 46.025 _chem_comp.id FMT _chem_comp.mon_nstd_flag . _chem_comp.name 'FORMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 FMT doub 83 n n C O2 FMT sing 84 n n C H FMT sing 85 n n O2 HO2 FMT sing 86 n n # _atom_sites.entry_id 6TYP _atom_sites.fract_transf_matrix[1][1] 0.00795 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002402 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013214 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021473 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMT A 1 801 801 FMT FMT . C 3 PKG A 1 802 1 PKG 267 . D 4 HOH A 1 901 30 HOH HOH . D 4 HOH A 2 902 34 HOH HOH . D 4 HOH A 3 903 52 HOH HOH . D 4 HOH A 4 904 26 HOH HOH . D 4 HOH A 5 905 2 HOH HOH . D 4 HOH A 6 906 11 HOH HOH . D 4 HOH A 7 907 4 HOH HOH . D 4 HOH A 8 908 41 HOH HOH . D 4 HOH A 9 909 24 HOH HOH . D 4 HOH A 10 910 8 HOH HOH . D 4 HOH A 11 911 3 HOH HOH . D 4 HOH A 12 912 57 HOH HOH . D 4 HOH A 13 913 51 HOH HOH . D 4 HOH A 14 914 53 HOH HOH . D 4 HOH A 15 915 59 HOH HOH . D 4 HOH A 16 916 46 HOH HOH . D 4 HOH A 17 917 16 HOH HOH . D 4 HOH A 18 918 1 HOH HOH . D 4 HOH A 19 919 7 HOH HOH . D 4 HOH A 20 920 60 HOH HOH . D 4 HOH A 21 921 17 HOH HOH . D 4 HOH A 22 922 5 HOH HOH . D 4 HOH A 23 923 27 HOH HOH . D 4 HOH A 24 924 14 HOH HOH . D 4 HOH A 25 925 10 HOH HOH . D 4 HOH A 26 926 39 HOH HOH . D 4 HOH A 27 927 23 HOH HOH . D 4 HOH A 28 928 33 HOH HOH . D 4 HOH A 29 929 9 HOH HOH . D 4 HOH A 30 930 15 HOH HOH . D 4 HOH A 31 931 21 HOH HOH . D 4 HOH A 32 932 43 HOH HOH . D 4 HOH A 33 933 31 HOH HOH . D 4 HOH A 34 934 63 HOH HOH . D 4 HOH A 35 935 47 HOH HOH . D 4 HOH A 36 936 22 HOH HOH . D 4 HOH A 37 937 55 HOH HOH . D 4 HOH A 38 938 62 HOH HOH . D 4 HOH A 39 939 28 HOH HOH . D 4 HOH A 40 940 12 HOH HOH . D 4 HOH A 41 941 45 HOH HOH . D 4 HOH A 42 942 54 HOH HOH . D 4 HOH A 43 943 40 HOH HOH . D 4 HOH A 44 944 13 HOH HOH . D 4 HOH A 45 945 20 HOH HOH . D 4 HOH A 46 946 29 HOH HOH . D 4 HOH A 47 947 48 HOH HOH . D 4 HOH A 48 948 32 HOH HOH . D 4 HOH A 49 949 56 HOH HOH . D 4 HOH A 50 950 42 HOH HOH . D 4 HOH A 51 951 6 HOH HOH . D 4 HOH A 52 952 61 HOH HOH . D 4 HOH A 53 953 50 HOH HOH . D 4 HOH A 54 954 44 HOH HOH . D 4 HOH A 55 955 49 HOH HOH . D 4 HOH A 56 956 58 HOH HOH . D 4 HOH A 57 957 19 HOH HOH . D 4 HOH A 58 958 25 HOH HOH . D 4 HOH A 59 959 18 HOH HOH . D 4 HOH A 60 960 35 HOH HOH . D 4 HOH A 61 961 36 HOH HOH . D 4 HOH A 62 962 37 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C FMT . . . B 2 -34.476 -17.337 28.424 1 51.44 ? C FMT 801 A 1 HETATM 2 O O1 FMT . . . B 2 -34.99 -16.25 28.681 1 51.71 ? O1 FMT 801 A 1 HETATM 3 O O2 FMT . . . B 2 -33.901 -18.04 29.253 1 49.66 ? O2 FMT 801 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 3 #