data_6TZ7 # _model_server_result.job_id fxNEDw5S7l4SqXpDwq8eIw _model_server_result.datetime_utc '2024-11-26 01:28:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6tz7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":202}' # _entry.id 6TZ7 # _exptl.entry_id 6TZ7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.28 _cell.angle_gamma 90 _cell.entry_id 6TZ7 _cell.length_a 59.24 _cell.length_b 94.46 _cell.length_c 69.83 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6TZ7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 8 I N N ? 8 J N N ? 8 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 106 A ASP 88 1_555 E FE FE . A FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.138 ? metalc ? metalc2 A NE2 HIS 108 A HIS 90 1_555 E FE FE . A FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? metalc ? metalc3 A OD2 ASP 134 A ASP 116 1_555 D ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? metalc ? metalc4 A OD2 ASP 134 A ASP 116 1_555 E FE FE . A FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc5 A OD1 ASN 166 A ASN 148 1_555 D ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc6 A NE2 HIS 215 A HIS 197 1_555 D ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? metalc ? metalc7 A ND1 HIS 297 A HIS 279 1_555 D ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.258 ? metalc ? metalc8 D ZN ZN . A ZN 401 1_555 F O2 PO4 . A PO4 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.492 ? metalc ? metalc9 E FE FE . A FE 402 1_555 F O4 PO4 . A PO4 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc10 B OD1 ASP 66 B ASP 85 1_555 K CA CA . B CA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.782 ? metalc ? metalc11 B OD2 ASP 68 B ASP 87 1_555 K CA CA . B CA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.114 ? metalc ? metalc12 B O ASP 72 B ASP 91 1_555 K CA CA . B CA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.543 ? metalc ? metalc13 B OE1 GLU 77 B GLU 96 1_555 K CA CA . B CA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.195 ? metalc ? metalc14 B OE2 GLU 77 B GLU 96 1_555 K CA CA . B CA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.54 ? metalc ? metalc15 B OD1 ASP 103 B ASP 122 1_555 I CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.566 ? metalc ? metalc16 B OD1 ASP 105 B ASP 124 1_555 I CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? metalc ? metalc17 B OD1 ASP 107 B ASP 126 1_555 I CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc18 B O TYR 109 B TYR 128 1_555 I CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? metalc ? metalc19 B OE1 GLU 114 B GLU 133 1_555 I CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? metalc ? metalc20 B OE2 GLU 114 B GLU 133 1_555 I CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.576 ? metalc ? metalc21 B OD1 ASP 144 B ASP 163 1_555 J CA CA . B CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.596 ? metalc ? metalc22 B OD1 ASP 146 B ASP 165 1_555 J CA CA . B CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.534 ? metalc ? metalc23 B OD1 ASP 148 B ASP 167 1_555 J CA CA . B CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? metalc ? metalc24 B OD2 ASP 148 B ASP 167 1_555 J CA CA . B CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.828 ? metalc ? metalc25 B O LYS 150 B LYS 169 1_555 J CA CA . B CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.602 ? metalc ? metalc26 B OE1 GLU 155 B GLU 174 1_555 J CA CA . B CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.733 ? metalc ? metalc27 B OE2 GLU 155 B GLU 174 1_555 J CA CA . B CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6TZ7 _atom_sites.fract_transf_matrix[1][1] 0.01688 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005905 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010586 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015171 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ZN A 1 401 401 ZN ZN . E 5 FE A 1 402 402 FE FE . F 6 PO4 A 1 403 403 PO4 PO4 . G 7 EDO A 1 404 404 EDO EDO . H 7 EDO A 1 405 405 EDO EDO . I 8 CA B 1 201 201 CA CA . J 8 CA B 1 202 202 CA CA . K 8 CA B 1 203 203 CA CA . L 9 FK5 C 1 201 201 FK5 FK5 . M 10 HOH A 1 501 501 HOH HOH . M 10 HOH A 2 502 502 HOH HOH . M 10 HOH A 3 503 503 HOH HOH . M 10 HOH A 4 504 504 HOH HOH . M 10 HOH A 5 505 505 HOH HOH . M 10 HOH A 6 506 506 HOH HOH . M 10 HOH A 7 507 507 HOH HOH . M 10 HOH A 8 508 508 HOH HOH . M 10 HOH A 9 509 509 HOH HOH . M 10 HOH A 10 510 510 HOH HOH . M 10 HOH A 11 511 511 HOH HOH . M 10 HOH A 12 512 512 HOH HOH . M 10 HOH A 13 513 513 HOH HOH . M 10 HOH A 14 514 514 HOH HOH . M 10 HOH A 15 515 515 HOH HOH . M 10 HOH A 16 516 516 HOH HOH . M 10 HOH A 17 517 517 HOH HOH . M 10 HOH A 18 518 518 HOH HOH . M 10 HOH A 19 519 519 HOH HOH . M 10 HOH A 20 520 520 HOH HOH . M 10 HOH A 21 521 521 HOH HOH . M 10 HOH A 22 522 522 HOH HOH . M 10 HOH A 23 523 523 HOH HOH . M 10 HOH A 24 524 524 HOH HOH . M 10 HOH A 25 525 525 HOH HOH . M 10 HOH A 26 526 526 HOH HOH . M 10 HOH A 27 527 527 HOH HOH . M 10 HOH A 28 528 528 HOH HOH . M 10 HOH A 29 529 529 HOH HOH . M 10 HOH A 30 530 530 HOH HOH . M 10 HOH A 31 531 531 HOH HOH . M 10 HOH A 32 532 532 HOH HOH . M 10 HOH A 33 533 533 HOH HOH . M 10 HOH A 34 534 534 HOH HOH . M 10 HOH A 35 535 535 HOH HOH . M 10 HOH A 36 536 536 HOH HOH . M 10 HOH A 37 537 537 HOH HOH . M 10 HOH A 38 538 538 HOH HOH . M 10 HOH A 39 539 539 HOH HOH . M 10 HOH A 40 540 540 HOH HOH . M 10 HOH A 41 541 541 HOH HOH . M 10 HOH A 42 542 542 HOH HOH . M 10 HOH A 43 543 543 HOH HOH . M 10 HOH A 44 544 544 HOH HOH . M 10 HOH A 45 545 545 HOH HOH . M 10 HOH A 46 546 546 HOH HOH . M 10 HOH A 47 547 547 HOH HOH . M 10 HOH A 48 548 548 HOH HOH . M 10 HOH A 49 549 549 HOH HOH . M 10 HOH A 50 550 550 HOH HOH . M 10 HOH A 51 551 551 HOH HOH . M 10 HOH A 52 552 552 HOH HOH . M 10 HOH A 53 553 553 HOH HOH . M 10 HOH A 54 554 554 HOH HOH . M 10 HOH A 55 555 555 HOH HOH . M 10 HOH A 56 556 556 HOH HOH . M 10 HOH A 57 557 557 HOH HOH . M 10 HOH A 58 558 558 HOH HOH . M 10 HOH A 59 559 559 HOH HOH . M 10 HOH A 60 560 560 HOH HOH . M 10 HOH A 61 561 561 HOH HOH . M 10 HOH A 62 562 562 HOH HOH . M 10 HOH A 63 563 563 HOH HOH . M 10 HOH A 64 564 564 HOH HOH . M 10 HOH A 65 565 565 HOH HOH . M 10 HOH A 66 566 566 HOH HOH . M 10 HOH A 67 567 567 HOH HOH . M 10 HOH A 68 568 568 HOH HOH . M 10 HOH A 69 569 569 HOH HOH . M 10 HOH A 70 570 570 HOH HOH . M 10 HOH A 71 571 571 HOH HOH . M 10 HOH A 72 572 572 HOH HOH . M 10 HOH A 73 573 573 HOH HOH . M 10 HOH A 74 574 574 HOH HOH . M 10 HOH A 75 575 575 HOH HOH . M 10 HOH A 76 576 576 HOH HOH . N 10 HOH B 1 301 301 HOH HOH . N 10 HOH B 2 302 302 HOH HOH . N 10 HOH B 3 303 303 HOH HOH . N 10 HOH B 4 304 304 HOH HOH . N 10 HOH B 5 305 305 HOH HOH . N 10 HOH B 6 306 306 HOH HOH . N 10 HOH B 7 307 307 HOH HOH . N 10 HOH B 8 308 308 HOH HOH . O 10 HOH C 1 301 301 HOH HOH . O 10 HOH C 2 302 302 HOH HOH . O 10 HOH C 3 303 303 HOH HOH . O 10 HOH C 4 304 304 HOH HOH . O 10 HOH C 5 305 305 HOH HOH . O 10 HOH C 6 306 306 HOH HOH . O 10 HOH C 7 307 307 HOH HOH . O 10 HOH C 8 308 308 HOH HOH . O 10 HOH C 9 309 309 HOH HOH . O 10 HOH C 10 310 310 HOH HOH . O 10 HOH C 11 311 311 HOH HOH . O 10 HOH C 12 312 312 HOH HOH . O 10 HOH C 13 313 313 HOH HOH . O 10 HOH C 14 314 314 HOH HOH . O 10 HOH C 15 315 315 HOH HOH . O 10 HOH C 16 316 316 HOH HOH . O 10 HOH C 17 317 317 HOH HOH . O 10 HOH C 18 318 318 HOH HOH . O 10 HOH C 19 319 319 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 8 _atom_site.Cartn_x -7.656 _atom_site.Cartn_y -20.366 _atom_site.Cartn_z -14.718 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 49.41 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 202 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #