data_6U0D # _model_server_result.job_id '_F75TGyI3E_5WfwhtTKfZQ' _model_server_result.datetime_utc '2024-10-19 03:37:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6u0d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 6U0D # _exptl.entry_id 6U0D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 512.545 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "N-[4-({(2S)-2-[(morpholin-4-yl)methyl]pyrrolidin-1-yl}sulfonyl)phenyl]-N'-[4-(trifluoromethyl)phenyl]urea" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6U0D _cell.length_a 37.47 _cell.length_b 42.38 _cell.length_c 80.29 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6U0D _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H27 F3 N4 O4 S' _chem_comp.formula_weight 512.545 _chem_comp.id POJ _chem_comp.mon_nstd_flag . _chem_comp.name "N-[4-({(2S)-2-[(morpholin-4-yl)methyl]pyrrolidin-1-yl}sulfonyl)phenyl]-N'-[4-(trifluoromethyl)phenyl]urea" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C21 C22 POJ sing 269 n n C21 N18 POJ sing 270 n n C25 N26 POJ sing 271 n n C25 C24 POJ sing 272 n n C27 C28 POJ sing 273 n n C27 N26 POJ sing 274 n n C22 C23 POJ sing 275 n n N18 C24 POJ sing 276 n n N18 S17 POJ sing 277 n n C28 O29 POJ sing 278 n n N26 C31 POJ sing 279 n n O29 C30 POJ sing 280 n n O20 S17 POJ doub 281 n n C24 C23 POJ sing 282 n n C31 C30 POJ sing 283 n n S17 O19 POJ doub 284 n n S17 C14 POJ sing 285 n n C14 C15 POJ doub 286 n y C14 C13 POJ sing 287 n y C15 C16 POJ sing 288 n y C13 C12 POJ doub 289 n y C16 C11 POJ doub 290 n y C12 C11 POJ sing 291 n y C11 N09 POJ sing 292 n n O10 C08 POJ doub 293 n n N09 C08 POJ sing 294 n n C08 N07 POJ sing 295 n n N07 C05 POJ sing 296 n n C04 C05 POJ doub 297 n y C04 C03 POJ sing 298 n y C05 C06 POJ sing 299 n y C03 C02 POJ doub 300 n y C06 C01 POJ doub 301 n y C02 C01 POJ sing 302 n y C02 C32 POJ sing 303 n n F35 C32 POJ sing 304 n n C32 F33 POJ sing 305 n n C32 F34 POJ sing 306 n n C12 H1 POJ sing 307 n n C13 H2 POJ sing 308 n n C01 H3 POJ sing 309 n n C03 H4 POJ sing 310 n n C04 H5 POJ sing 311 n n C06 H6 POJ sing 312 n n C15 H7 POJ sing 313 n n C16 H8 POJ sing 314 n n C21 H9 POJ sing 315 n n C21 H10 POJ sing 316 n n C22 H11 POJ sing 317 n n C22 H12 POJ sing 318 n n C23 H13 POJ sing 319 n n C23 H14 POJ sing 320 n n C24 H15 POJ sing 321 n n C25 H16 POJ sing 322 n n C25 H17 POJ sing 323 n n C27 H18 POJ sing 324 n n C27 H19 POJ sing 325 n n C28 H20 POJ sing 326 n n C28 H21 POJ sing 327 n n C30 H22 POJ sing 328 n n C30 H23 POJ sing 329 n n C31 H24 POJ sing 330 n n C31 H25 POJ sing 331 n n N07 H26 POJ sing 332 n n N09 H27 POJ sing 333 n n # _atom_sites.entry_id 6U0D _atom_sites.fract_transf_matrix[1][1] 0.026688 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023596 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012455 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DMS A 1 201 201 DMS DMS . C 3 POJ A 1 202 202 POJ POJ . D 4 HOH A 1 301 301 HOH HOH . D 4 HOH A 2 302 302 HOH HOH . D 4 HOH A 3 303 303 HOH HOH . D 4 HOH A 4 304 304 HOH HOH . D 4 HOH A 5 305 305 HOH HOH . D 4 HOH A 6 306 306 HOH HOH . D 4 HOH A 7 307 307 HOH HOH . D 4 HOH A 8 308 308 HOH HOH . D 4 HOH A 9 309 309 HOH HOH . D 4 HOH A 10 310 310 HOH HOH . D 4 HOH A 11 311 311 HOH HOH . D 4 HOH A 12 312 312 HOH HOH . D 4 HOH A 13 313 313 HOH HOH . D 4 HOH A 14 314 314 HOH HOH . D 4 HOH A 15 315 315 HOH HOH . D 4 HOH A 16 316 316 HOH HOH . D 4 HOH A 17 317 317 HOH HOH . D 4 HOH A 18 318 318 HOH HOH . D 4 HOH A 19 319 319 HOH HOH . D 4 HOH A 20 320 320 HOH HOH . D 4 HOH A 21 321 321 HOH HOH . D 4 HOH A 22 322 322 HOH HOH . D 4 HOH A 23 323 323 HOH HOH . D 4 HOH A 24 324 324 HOH HOH . D 4 HOH A 25 325 325 HOH HOH . D 4 HOH A 26 326 326 HOH HOH . D 4 HOH A 27 327 327 HOH HOH . D 4 HOH A 28 328 328 HOH HOH . D 4 HOH A 29 329 329 HOH HOH . D 4 HOH A 30 330 330 HOH HOH . D 4 HOH A 31 331 331 HOH HOH . D 4 HOH A 32 332 332 HOH HOH . D 4 HOH A 33 333 333 HOH HOH . D 4 HOH A 34 334 334 HOH HOH . D 4 HOH A 35 335 335 HOH HOH . D 4 HOH A 36 336 336 HOH HOH . D 4 HOH A 37 337 337 HOH HOH . D 4 HOH A 38 338 338 HOH HOH . D 4 HOH A 39 339 339 HOH HOH . D 4 HOH A 40 340 340 HOH HOH . D 4 HOH A 41 341 341 HOH HOH . D 4 HOH A 42 342 342 HOH HOH . D 4 HOH A 43 343 343 HOH HOH . D 4 HOH A 44 344 344 HOH HOH . D 4 HOH A 45 345 345 HOH HOH . D 4 HOH A 46 346 346 HOH HOH . D 4 HOH A 47 347 347 HOH HOH . D 4 HOH A 48 348 348 HOH HOH . D 4 HOH A 49 349 349 HOH HOH . D 4 HOH A 50 350 350 HOH HOH . D 4 HOH A 51 351 351 HOH HOH . D 4 HOH A 52 352 352 HOH HOH . D 4 HOH A 53 353 353 HOH HOH . D 4 HOH A 54 354 354 HOH HOH . D 4 HOH A 55 355 355 HOH HOH . D 4 HOH A 56 356 356 HOH HOH . D 4 HOH A 57 357 357 HOH HOH . D 4 HOH A 58 358 358 HOH HOH . D 4 HOH A 59 359 359 HOH HOH . D 4 HOH A 60 360 360 HOH HOH . D 4 HOH A 61 361 361 HOH HOH . D 4 HOH A 62 362 362 HOH HOH . D 4 HOH A 63 363 363 HOH HOH . D 4 HOH A 64 364 364 HOH HOH . D 4 HOH A 65 365 365 HOH HOH . D 4 HOH A 66 366 366 HOH HOH . D 4 HOH A 67 367 367 HOH HOH . D 4 HOH A 68 368 368 HOH HOH . D 4 HOH A 69 369 369 HOH HOH . D 4 HOH A 70 370 370 HOH HOH . D 4 HOH A 71 371 371 HOH HOH . D 4 HOH A 72 372 372 HOH HOH . D 4 HOH A 73 373 373 HOH HOH . D 4 HOH A 74 374 374 HOH HOH . D 4 HOH A 75 375 375 HOH HOH . D 4 HOH A 76 376 376 HOH HOH . D 4 HOH A 77 377 377 HOH HOH . D 4 HOH A 78 378 378 HOH HOH . D 4 HOH A 79 379 379 HOH HOH . D 4 HOH A 80 380 380 HOH HOH . D 4 HOH A 81 381 381 HOH HOH . D 4 HOH A 82 382 382 HOH HOH . D 4 HOH A 83 383 383 HOH HOH . D 4 HOH A 84 384 384 HOH HOH . D 4 HOH A 85 385 385 HOH HOH . D 4 HOH A 86 386 386 HOH HOH . D 4 HOH A 87 387 387 HOH HOH . D 4 HOH A 88 388 388 HOH HOH . D 4 HOH A 89 389 389 HOH HOH . D 4 HOH A 90 390 390 HOH HOH . D 4 HOH A 91 391 391 HOH HOH . D 4 HOH A 92 392 392 HOH HOH . D 4 HOH A 93 393 393 HOH HOH . D 4 HOH A 94 394 394 HOH HOH . D 4 HOH A 95 395 395 HOH HOH . D 4 HOH A 96 396 396 HOH HOH . D 4 HOH A 97 397 397 HOH HOH . D 4 HOH A 98 398 398 HOH HOH . D 4 HOH A 99 399 399 HOH HOH . D 4 HOH A 100 400 400 HOH HOH . D 4 HOH A 101 401 401 HOH HOH . D 4 HOH A 102 402 402 HOH HOH . D 4 HOH A 103 403 403 HOH HOH . D 4 HOH A 104 404 404 HOH HOH . D 4 HOH A 105 405 405 HOH HOH . D 4 HOH A 106 406 406 HOH HOH . D 4 HOH A 107 407 407 HOH HOH . D 4 HOH A 108 408 408 HOH HOH . D 4 HOH A 109 409 409 HOH HOH . D 4 HOH A 110 410 410 HOH HOH . D 4 HOH A 111 411 411 HOH HOH . D 4 HOH A 112 412 412 HOH HOH . D 4 HOH A 113 413 413 HOH HOH . D 4 HOH A 114 414 414 HOH HOH . D 4 HOH A 115 415 415 HOH HOH . D 4 HOH A 116 416 416 HOH HOH . D 4 HOH A 117 417 417 HOH HOH . D 4 HOH A 118 418 418 HOH HOH . D 4 HOH A 119 419 419 HOH HOH . D 4 HOH A 120 420 420 HOH HOH . D 4 HOH A 121 421 421 HOH HOH . D 4 HOH A 122 422 422 HOH HOH . D 4 HOH A 123 423 423 HOH HOH . D 4 HOH A 124 424 424 HOH HOH . D 4 HOH A 125 425 425 HOH HOH . D 4 HOH A 126 426 426 HOH HOH . D 4 HOH A 127 427 427 HOH HOH . D 4 HOH A 128 428 428 HOH HOH . D 4 HOH A 129 429 429 HOH HOH . D 4 HOH A 130 430 430 HOH HOH . D 4 HOH A 131 431 431 HOH HOH . D 4 HOH A 132 432 432 HOH HOH . D 4 HOH A 133 433 433 HOH HOH . D 4 HOH A 134 434 434 HOH HOH . D 4 HOH A 135 435 435 HOH HOH . D 4 HOH A 136 436 436 HOH HOH . D 4 HOH A 137 437 437 HOH HOH . D 4 HOH A 138 438 438 HOH HOH . D 4 HOH A 139 439 439 HOH HOH . D 4 HOH A 140 440 440 HOH HOH . D 4 HOH A 141 441 441 HOH HOH . D 4 HOH A 142 442 442 HOH HOH . D 4 HOH A 143 443 443 HOH HOH . D 4 HOH A 144 444 444 HOH HOH . D 4 HOH A 145 445 445 HOH HOH . D 4 HOH A 146 446 446 HOH HOH . D 4 HOH A 147 447 447 HOH HOH . D 4 HOH A 148 448 448 HOH HOH . D 4 HOH A 149 449 449 HOH HOH . D 4 HOH A 150 450 450 HOH HOH . D 4 HOH A 151 451 451 HOH HOH . D 4 HOH A 152 452 452 HOH HOH . D 4 HOH A 153 453 453 HOH HOH . D 4 HOH A 154 454 454 HOH HOH . D 4 HOH A 155 455 455 HOH HOH . D 4 HOH A 156 456 456 HOH HOH . D 4 HOH A 157 457 457 HOH HOH . D 4 HOH A 158 458 458 HOH HOH . D 4 HOH A 159 459 459 HOH HOH . D 4 HOH A 160 460 460 HOH HOH . D 4 HOH A 161 461 461 HOH HOH . D 4 HOH A 162 462 462 HOH HOH . D 4 HOH A 163 463 463 HOH HOH . D 4 HOH A 164 464 464 HOH HOH . D 4 HOH A 165 465 465 HOH HOH . D 4 HOH A 166 466 466 HOH HOH . D 4 HOH A 167 467 467 HOH HOH . D 4 HOH A 168 468 468 HOH HOH . D 4 HOH A 169 469 469 HOH HOH . D 4 HOH A 170 470 470 HOH HOH . D 4 HOH A 171 471 471 HOH HOH . D 4 HOH A 172 472 472 HOH HOH . D 4 HOH A 173 473 473 HOH HOH . D 4 HOH A 174 474 474 HOH HOH . D 4 HOH A 175 475 475 HOH HOH . D 4 HOH A 176 476 476 HOH HOH . D 4 HOH A 177 477 477 HOH HOH . D 4 HOH A 178 478 478 HOH HOH . D 4 HOH A 179 479 479 HOH HOH . D 4 HOH A 180 480 480 HOH HOH . D 4 HOH A 181 481 481 HOH HOH . D 4 HOH A 182 482 482 HOH HOH . D 4 HOH A 183 483 483 HOH HOH . D 4 HOH A 184 484 484 HOH HOH . D 4 HOH A 185 485 485 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C14 POJ . . . C 3 -15.857 5.949 7.75 1 31.98 ? C14 POJ 202 A 1 HETATM 2 C C11 POJ . . . C 3 -17.179 6.609 5.266 1 23.04 ? C11 POJ 202 A 1 HETATM 3 C C12 POJ . . . C 3 -15.812 6.889 5.477 1 24.12 ? C12 POJ 202 A 1 HETATM 4 C C13 POJ . . . C 3 -15.181 6.557 6.681 1 27.6 ? C13 POJ 202 A 1 HETATM 5 C C01 POJ . . . C 3 -22.193 6.644 -0.547 1 29.27 ? C01 POJ 202 A 1 HETATM 6 C C02 POJ . . . C 3 -23.128 5.729 -0.069 1 26.15 ? C02 POJ 202 A 1 HETATM 7 C C03 POJ . . . C 3 -22.93 5.202 1.224 1 23.88 ? C03 POJ 202 A 1 HETATM 8 C C04 POJ . . . C 3 -21.816 5.581 2.009 1 25.34 ? C04 POJ 202 A 1 HETATM 9 C C05 POJ . . . C 3 -20.84 6.505 1.534 1 26.36 ? C05 POJ 202 A 1 HETATM 10 C C06 POJ . . . C 3 -21.087 7.015 0.238 1 22.14 ? C06 POJ 202 A 1 HETATM 11 C C08 POJ . . . C 3 -19.076 6.405 3.496 1 20.81 ? C08 POJ 202 A 1 HETATM 12 C C15 POJ . . . C 3 -17.22 5.696 7.554 1 26.73 ? C15 POJ 202 A 1 HETATM 13 C C16 POJ . . . C 3 -17.873 6.018 6.364 1 28.06 ? C16 POJ 202 A 1 HETATM 14 C C21 POJ . . . C 3 -16.402 7.592 10.865 1 36.46 ? C21 POJ 202 A 1 HETATM 15 C C22 POJ . . . C 3 -16.777 8.992 10.325 1 32.54 ? C22 POJ 202 A 1 HETATM 16 C C23 POJ . . . C 3 -15.581 9.4 9.486 1 35.1 ? C23 POJ 202 A 1 HETATM 17 C C24 POJ . . . C 3 -14.481 8.301 9.733 1 34.36 ? C24 POJ 202 A 1 HETATM 18 C C25 POJ . . . C 3 -13.409 8.804 10.731 1 34.56 ? C25 POJ 202 A 1 HETATM 19 C C27 POJ . . . C 3 -10.99 8.919 10.683 1 38.81 ? C27 POJ 202 A 1 HETATM 20 C C28 POJ . . . C 3 -9.736 9.621 10.128 1 40.48 ? C28 POJ 202 A 1 HETATM 21 C C30 POJ . . . C 3 -11.037 11.344 9.111 1 41.93 ? C30 POJ 202 A 1 HETATM 22 C C31 POJ . . . C 3 -12.344 10.691 9.601 1 37.36 ? C31 POJ 202 A 1 HETATM 23 C C32 POJ . . . C 3 -24.345 5.358 -0.937 1 30.61 ? C32 POJ 202 A 1 HETATM 24 F F33 POJ . . . C 3 -24.974 6.421 -1.452 1 39.56 ? F33 POJ 202 A 1 HETATM 25 F F34 POJ . . . C 3 -24.096 4.582 -2.007 1 38.53 ? F34 POJ 202 A 1 HETATM 26 F F35 POJ . . . C 3 -25.315 4.701 -0.29 1 32.57 ? F35 POJ 202 A 1 HETATM 27 N N07 POJ . . . C 3 -19.658 6.938 2.289 1 24.48 ? N07 POJ 202 A 1 HETATM 28 N N09 POJ . . . C 3 -17.867 6.973 4.045 1 22.63 ? N09 POJ 202 A 1 HETATM 29 N N18 POJ . . . C 3 -15.18 7.021 10.187 1 37.48 ? N18 POJ 202 A 1 HETATM 30 N N26 POJ . . . C 3 -12.224 9.245 9.934 1 40.94 ? N26 POJ 202 A 1 HETATM 31 O O10 POJ . . . C 3 -19.593 5.455 4.046 1 20.33 ? O10 POJ 202 A 1 HETATM 32 O O19 POJ . . . C 3 -13.695 5.218 9.001 1 36.44 ? O19 POJ 202 A 1 HETATM 33 O O20 POJ . . . C 3 -15.693 4.447 9.908 1 34.36 ? O20 POJ 202 A 1 HETATM 34 O O29 POJ . . . C 3 -9.928 11.007 9.918 1 43.57 ? O29 POJ 202 A 1 HETATM 35 S S17 POJ . . . C 3 -15.055 5.554 9.265 1 36.55 ? S17 POJ 202 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 35 #