data_6U1P # _model_server_result.job_id aLM3JL4edLkdgknYgeefFw _model_server_result.datetime_utc '2025-08-30 00:03:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6u1p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 6U1P # _exptl.entry_id 6U1P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6U1P _cell.length_a 80.323 _cell.length_b 80.323 _cell.length_c 105.053 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6U1P _symmetry.cell_setting ? _symmetry.Int_Tables_number 80 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 6U1P _atom_sites.fract_transf_matrix[1][1] 0.01245 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01245 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009519 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL B 1 201 1 GOL GOL . D 2 GOL B 1 202 2 GOL GOL . E 3 HOH A 1 201 24 HOH HOH . E 3 HOH A 2 202 21 HOH HOH . E 3 HOH A 3 203 22 HOH HOH . E 3 HOH A 4 204 34 HOH HOH . E 3 HOH A 5 205 19 HOH HOH . E 3 HOH A 6 206 11 HOH HOH . E 3 HOH A 7 207 6 HOH HOH . E 3 HOH A 8 208 9 HOH HOH . E 3 HOH A 9 209 15 HOH HOH . E 3 HOH A 10 210 2 HOH HOH . E 3 HOH A 11 211 5 HOH HOH . E 3 HOH A 12 212 27 HOH HOH . E 3 HOH A 13 213 10 HOH HOH . E 3 HOH A 14 214 7 HOH HOH . E 3 HOH A 15 215 28 HOH HOH . E 3 HOH A 16 216 3 HOH HOH . E 3 HOH A 17 217 17 HOH HOH . E 3 HOH A 18 218 1 HOH HOH . E 3 HOH A 19 219 16 HOH HOH . F 3 HOH B 1 301 31 HOH HOH . F 3 HOH B 2 302 14 HOH HOH . F 3 HOH B 3 303 29 HOH HOH . F 3 HOH B 4 304 12 HOH HOH . F 3 HOH B 5 305 26 HOH HOH . F 3 HOH B 6 306 13 HOH HOH . F 3 HOH B 7 307 4 HOH HOH . F 3 HOH B 8 308 8 HOH HOH . F 3 HOH B 9 309 32 HOH HOH . F 3 HOH B 10 310 25 HOH HOH . F 3 HOH B 11 311 23 HOH HOH . F 3 HOH B 12 312 20 HOH HOH . F 3 HOH B 13 313 30 HOH HOH . F 3 HOH B 14 314 33 HOH HOH . F 3 HOH B 15 315 35 HOH HOH . F 3 HOH B 16 316 18 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 2 7.416 27.876 50.66 1 81.78 ? C1 GOL 202 B 1 HETATM 2 O O1 GOL . . . D 2 7.916 28.106 49.366 1 82.57 ? O1 GOL 202 B 1 HETATM 3 C C2 GOL . . . D 2 8.614 27.455 51.548 1 83.09 ? C2 GOL 202 B 1 HETATM 4 O O2 GOL . . . D 2 9.593 28.436 51.624 1 84.34 ? O2 GOL 202 B 1 HETATM 5 C C3 GOL . . . D 2 8.004 27.154 52.936 1 80.8 ? C3 GOL 202 B 1 HETATM 6 O O3 GOL . . . D 2 8.658 28.003 53.817 1 76.22 ? O3 GOL 202 B 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 399 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #