data_6U25 # _model_server_result.job_id 1Rt7wwCjUobY_rC1cpNu7w _model_server_result.datetime_utc '2024-10-10 16:23:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6u25 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 6U25 # _exptl.entry_id 6U25 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 653.581 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'trans-4-[(3aR,9bR)-9b-[(4-fluorophenyl)sulfonyl]-7-(1,1,1,2,3,3,3-heptafluoropropan-2-yl)-1,2,3a,4,5,9b-hexahydro-3H-benzo[e]indole-3-carbonyl]cyclohexane-1-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6U25 _cell.length_a 61.656 _cell.length_b 61.656 _cell.length_c 158.271 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6U25 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C29 H27 F8 N O5 S' _chem_comp.formula_weight 653.581 _chem_comp.id O5B _chem_comp.mon_nstd_flag . _chem_comp.name 'trans-4-[(3aR,9bR)-9b-[(4-fluorophenyl)sulfonyl]-7-(1,1,1,2,3,3,3-heptafluoropropan-2-yl)-1,2,3a,4,5,9b-hexahydro-3H-benzo[e]indole-3-carbonyl]cyclohexane-1-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O23 S15 O5B doub 250 n n O24 S15 O5B doub 251 n n C1 C2 O5B sing 252 n n C1 C5 O5B sing 253 n n S15 C5 O5B sing 254 n n S15 C16 O5B sing 255 n n F32 C25 O5B sing 256 n n C13 C12 O5B doub 257 n y C13 C9 O5B sing 258 n y C12 C11 O5B sing 259 n y F31 C25 O5B sing 260 n n C2 N3 O5B sing 261 n n C5 C9 O5B sing 262 n n C5 C4 O5B sing 263 n n C17 C16 O5B doub 264 n y C17 C18 O5B sing 265 n y C16 C20 O5B sing 266 n y C25 F33 O5B sing 267 n n C25 C14 O5B sing 268 n n C9 C8 O5B doub 269 n y F28 C26 O5B sing 270 n n C38 C37 O5B sing 271 n n C38 C39 O5B sing 272 n n C35 C37 O5B sing 273 n n C35 C34 O5B sing 274 n n C35 C41 O5B sing 275 n n N3 C34 O5B sing 276 n n N3 C4 O5B sing 277 n n C11 C14 O5B sing 278 n n C11 C10 O5B doub 279 n y C18 C21 O5B doub 280 n y O44 C42 O5B doub 281 n n C34 O36 O5B doub 282 n n O43 C42 O5B sing 283 n n C20 C19 O5B doub 284 n y C4 C6 O5B sing 285 n n C42 C39 O5B sing 286 n n C40 C39 O5B sing 287 n n C40 C41 O5B sing 288 n n C14 C26 O5B sing 289 n n C14 F27 O5B sing 290 n n C26 F29 O5B sing 291 n n C26 F30 O5B sing 292 n n C8 C10 O5B sing 293 n y C8 C7 O5B sing 294 n n C21 C19 O5B sing 295 n y C21 F22 O5B sing 296 n n C6 C7 O5B sing 297 n n C1 H1 O5B sing 298 n n C1 H2 O5B sing 299 n n C2 H3 O5B sing 300 n n C2 H4 O5B sing 301 n n C4 H5 O5B sing 302 n n C6 H6 O5B sing 303 n n C6 H7 O5B sing 304 n n C7 H8 O5B sing 305 n n C7 H9 O5B sing 306 n n C10 H10 O5B sing 307 n n C12 H11 O5B sing 308 n n C13 H12 O5B sing 309 n n C17 H13 O5B sing 310 n n C18 H14 O5B sing 311 n n C19 H15 O5B sing 312 n n C20 H16 O5B sing 313 n n C35 H17 O5B sing 314 n n C37 H18 O5B sing 315 n n C37 H19 O5B sing 316 n n C38 H20 O5B sing 317 n n C38 H21 O5B sing 318 n n C39 H22 O5B sing 319 n n C40 H23 O5B sing 320 n n C40 H24 O5B sing 321 n n C41 H25 O5B sing 322 n n C41 H26 O5B sing 323 n n O43 H27 O5B sing 324 n n # _atom_sites.entry_id 6U25 _atom_sites.fract_transf_matrix[1][1] 0.016219 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016219 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006318 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 O5B A 1 601 4000 O5B O5B . C 3 GOL A 1 602 1 GOL GOL . D 4 HOH A 1 701 2 HOH HOH . D 4 HOH A 2 702 3 HOH HOH . D 4 HOH A 3 703 5 HOH HOH . D 4 HOH A 4 704 6 HOH HOH . D 4 HOH A 5 705 4 HOH HOH . D 4 HOH A 6 706 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 O5B . . . B 2 66.316 37.604 13.409 1 70.85 ? C1 O5B 601 A 1 HETATM 2 C C2 O5B . . . B 2 65.13 38.075 14.258 1 68.78 ? C2 O5B 601 A 1 HETATM 3 N N3 O5B . . . B 2 64.809 36.878 15.056 1 67.36 ? N3 O5B 601 A 1 HETATM 4 C C4 O5B . . . B 2 66.072 36.28 15.514 1 69.13 ? C4 O5B 601 A 1 HETATM 5 C C5 O5B . . . B 2 67.041 36.559 14.301 1 74.21 ? C5 O5B 601 A 1 HETATM 6 C C6 O5B . . . B 2 66.529 36.837 16.863 1 67.75 ? C6 O5B 601 A 1 HETATM 7 C C7 O5B . . . B 2 68.001 36.555 17.125 1 68.76 ? C7 O5B 601 A 1 HETATM 8 C C8 O5B . . . B 2 68.901 36.989 15.993 1 72.57 ? C8 O5B 601 A 1 HETATM 9 C C9 O5B . . . B 2 68.448 37.041 14.664 1 74.2 ? C9 O5B 601 A 1 HETATM 10 C C10 O5B . . . B 2 70.22 37.347 16.274 1 74.43 ? C10 O5B 601 A 1 HETATM 11 C C11 O5B . . . B 2 71.108 37.759 15.282 1 76.53 ? C11 O5B 601 A 1 HETATM 12 C C12 O5B . . . B 2 70.632 37.827 13.977 1 73.97 ? C12 O5B 601 A 1 HETATM 13 C C13 O5B . . . B 2 69.33 37.477 13.678 1 73.68 ? C13 O5B 601 A 1 HETATM 14 C C14 O5B . . . B 2 72.567 38.086 15.616 1 82.42 ? C14 O5B 601 A 1 HETATM 15 S S15 O5B . . . B 2 67.368 34.973 13.441 1 82.43 ? S15 O5B 601 A 1 HETATM 16 C C16 O5B . . . B 2 68.415 34.073 14.541 1 79.4 ? C16 O5B 601 A 1 HETATM 17 C C17 O5B . . . B 2 69.793 34.22 14.452 1 77.55 ? C17 O5B 601 A 1 HETATM 18 C C18 O5B . . . B 2 70.606 33.553 15.351 1 77.25 ? C18 O5B 601 A 1 HETATM 19 C C19 O5B . . . B 2 68.657 32.586 16.402 1 77.49 ? C19 O5B 601 A 1 HETATM 20 C C20 O5B . . . B 2 67.843 33.254 15.505 1 78.4 ? C20 O5B 601 A 1 HETATM 21 C C21 O5B . . . B 2 70.015 32.758 16.305 1 77.86 ? C21 O5B 601 A 1 HETATM 22 F F22 O5B . . . B 2 70.81 32.122 17.198 1 79.32 ? F22 O5B 601 A 1 HETATM 23 O O23 O5B . . . B 2 68.11 35.259 12.241 1 85.32 ? O23 O5B 601 A 1 HETATM 24 O O24 O5B . . . B 2 66.126 34.258 13.329 1 83.25 ? O24 O5B 601 A 1 HETATM 25 C C25 O5B . . . B 2 73.264 39.048 14.589 1 88.88 ? C25 O5B 601 A 1 HETATM 26 C C26 O5B . . . B 2 73.395 36.783 15.82 1 81.29 ? C26 O5B 601 A 1 HETATM 27 F F27 O5B . . . B 2 72.653 38.742 16.828 1 81.38 ? F27 O5B 601 A 1 HETATM 28 F F28 O5B . . . B 2 73.321 35.98 14.757 1 81.14 ? F28 O5B 601 A 1 HETATM 29 F F29 O5B . . . B 2 74.684 37.053 16.022 1 80.81 ? F29 O5B 601 A 1 HETATM 30 F F30 O5B . . . B 2 72.963 36.088 16.869 1 80.21 ? F30 O5B 601 A 1 HETATM 31 F F31 O5B . . . B 2 72.48 40.069 14.243 1 89.69 ? F31 O5B 601 A 1 HETATM 32 F F32 O5B . . . B 2 73.614 38.42 13.465 1 88.7 ? F32 O5B 601 A 1 HETATM 33 F F33 O5B . . . B 2 74.376 39.559 15.108 1 93.19 ? F33 O5B 601 A 1 HETATM 34 C C34 O5B . . . B 2 63.643 36.299 15.429 1 62.96 ? C34 O5B 601 A 1 HETATM 35 C C35 O5B . . . B 2 62.333 36.976 15.029 1 62.58 ? C35 O5B 601 A 1 HETATM 36 O O36 O5B . . . B 2 63.632 35.255 16.053 1 60.36 ? O36 O5B 601 A 1 HETATM 37 C C37 O5B . . . B 2 61.142 36.028 15.278 1 62.71 ? C37 O5B 601 A 1 HETATM 38 C C38 O5B . . . B 2 59.802 36.703 14.945 1 63.44 ? C38 O5B 601 A 1 HETATM 39 C C39 O5B . . . B 2 59.608 37.991 15.764 1 65.44 ? C39 O5B 601 A 1 HETATM 40 C C40 O5B . . . B 2 60.794 38.939 15.517 1 63.22 ? C40 O5B 601 A 1 HETATM 41 C C41 O5B . . . B 2 62.126 38.261 15.856 1 62.95 ? C41 O5B 601 A 1 HETATM 42 C C42 O5B . . . B 2 58.261 38.645 15.517 1 68.48 ? C42 O5B 601 A 1 HETATM 43 O O43 O5B . . . B 2 58.298 39.956 15.456 1 69.46 ? O43 O5B 601 A 1 HETATM 44 O O44 O5B . . . B 2 57.235 38.011 15.388 1 68.59 ? O44 O5B 601 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 44 #