data_6U2Z # _model_server_result.job_id IDq159S4MPSpEttqUych-g _model_server_result.datetime_utc '2024-11-10 01:32:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6u2z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 6U2Z # _exptl.entry_id 6U2Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 63.546 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COPPER (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6U2Z _cell.length_a 104.234 _cell.length_b 104.234 _cell.length_c 98.793 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6U2Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 _symmetry.space_group_name_Hall 'P 64 2 (x,y,z+1/6)' _symmetry.space_group_name_H-M 'P 64 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 52.117 90.269292 0 3 'crystal symmetry operation' 7_555 y,x,-z+1/3 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 32.931 4 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/3 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 52.117 90.269292 32.931 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 223 A CYS 239 1_555 A SG CYS 251 A CYS 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc1 A NE2 HIS 89 A HIS 105 1_555 D CU CU . A CU 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? metalc ? metalc2 A ND1 HIS 91 A HIS 107 1_555 D CU CU . A CU 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.184 ? metalc ? metalc3 A OD2 ASP 93 A ASP 109 1_555 C CU CU . A CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc4 A NE2 HIS 94 A HIS 110 1_555 C CU CU . A CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? metalc ? metalc5 A NE2 HIS 165 A HIS 181 1_555 D CU CU . A CU 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? metalc ? metalc6 A NE2 HIS 230 A HIS 246 1_555 C CU CU . A CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? metalc ? metalc7 B N8 3P7 . A 3P7 300 1_555 C CU CU . A CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.623 ? metalc ? metalc8 B O82 3P7 . A 3P7 300 1_555 C CU CU . A CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc9 C CU CU . A CU 301 1_555 F O HOH . A HOH 416 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? metalc ? metalc10 D CU CU . A CU 302 1_555 F O HOH . A HOH 416 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? # _chem_comp.formula 'Cu 2' _chem_comp.formula_weight 63.546 _chem_comp.id CU _chem_comp.mon_nstd_flag . _chem_comp.name 'COPPER (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6U2Z _atom_sites.fract_transf_matrix[1][1] 0.009594 _atom_sites.fract_transf_matrix[1][2] 0.005539 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011078 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010122 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 3P7 A 1 300 300 3P7 JNK . C 3 CU A 1 301 301 CU CU . D 3 CU A 1 302 302 CU CU . E 4 EDO A 1 303 303 EDO EDO . F 5 HOH A 1 401 52 HOH HOH . F 5 HOH A 2 402 11 HOH HOH . F 5 HOH A 3 403 51 HOH HOH . F 5 HOH A 4 404 16 HOH HOH . F 5 HOH A 5 405 48 HOH HOH . F 5 HOH A 6 406 12 HOH HOH . F 5 HOH A 7 407 49 HOH HOH . F 5 HOH A 8 408 37 HOH HOH . F 5 HOH A 9 409 28 HOH HOH . F 5 HOH A 10 410 60 HOH HOH . F 5 HOH A 11 411 22 HOH HOH . F 5 HOH A 12 412 3 HOH HOH . F 5 HOH A 13 413 19 HOH HOH . F 5 HOH A 14 414 13 HOH HOH . F 5 HOH A 15 415 38 HOH HOH . F 5 HOH A 16 416 61 HOH HOH . F 5 HOH A 17 417 30 HOH HOH . F 5 HOH A 18 418 20 HOH HOH . F 5 HOH A 19 419 8 HOH HOH . F 5 HOH A 20 420 59 HOH HOH . F 5 HOH A 21 421 9 HOH HOH . F 5 HOH A 22 422 33 HOH HOH . F 5 HOH A 23 423 47 HOH HOH . F 5 HOH A 24 424 57 HOH HOH . F 5 HOH A 25 425 32 HOH HOH . F 5 HOH A 26 426 50 HOH HOH . F 5 HOH A 27 427 36 HOH HOH . F 5 HOH A 28 428 24 HOH HOH . F 5 HOH A 29 429 42 HOH HOH . F 5 HOH A 30 430 1 HOH HOH . F 5 HOH A 31 431 7 HOH HOH . F 5 HOH A 32 432 27 HOH HOH . F 5 HOH A 33 433 31 HOH HOH . F 5 HOH A 34 434 55 HOH HOH . F 5 HOH A 35 435 14 HOH HOH . F 5 HOH A 36 436 21 HOH HOH . F 5 HOH A 37 437 5 HOH HOH . F 5 HOH A 38 438 29 HOH HOH . F 5 HOH A 39 439 26 HOH HOH . F 5 HOH A 40 440 35 HOH HOH . F 5 HOH A 41 441 44 HOH HOH . F 5 HOH A 42 442 23 HOH HOH . F 5 HOH A 43 443 39 HOH HOH . F 5 HOH A 44 444 53 HOH HOH . F 5 HOH A 45 445 58 HOH HOH . F 5 HOH A 46 446 54 HOH HOH . F 5 HOH A 47 447 17 HOH HOH . F 5 HOH A 48 448 25 HOH HOH . F 5 HOH A 49 449 6 HOH HOH . F 5 HOH A 50 450 4 HOH HOH . F 5 HOH A 51 451 10 HOH HOH . F 5 HOH A 52 452 45 HOH HOH . F 5 HOH A 53 453 2 HOH HOH . F 5 HOH A 54 454 34 HOH HOH . F 5 HOH A 55 455 40 HOH HOH . F 5 HOH A 56 456 46 HOH HOH . F 5 HOH A 57 457 18 HOH HOH . F 5 HOH A 58 458 43 HOH HOH . F 5 HOH A 59 459 56 HOH HOH . F 5 HOH A 60 460 41 HOH HOH . F 5 HOH A 61 461 15 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CU _atom_site.label_atom_id CU _atom_site.label_comp_id CU _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 22.397 _atom_site.Cartn_y 25.259 _atom_site.Cartn_z 1.343 _atom_site.occupancy 0.9 _atom_site.B_iso_or_equiv 38.71 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CU _atom_site.auth_comp_id CU _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #