data_6U38 # _model_server_result.job_id ge4oniZUDC1Y11_zH1kkbw _model_server_result.datetime_utc '2025-07-16 05:04:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6u38 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":801}' # _entry.id 6U38 # _exptl.entry_id 6U38 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 555.618 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-fluoro-4-{[(1R)-1-methyl-6-{[(2S)-oxan-2-yl]methoxy}-1-{2-oxo-2-[(1,3-thiazol-2-yl)amino]ethyl}-1,2,3,4-tetrahydroisoquinolin-7-yl]oxy}benzoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6U38 _cell.length_a 155.033 _cell.length_b 155.033 _cell.length_c 151.919 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6U38 _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 193 B CYS 223 1_555 B SG CYS 225 B CYS 255 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf2 B SG CYS 293 B CYS 323 1_555 B SG CYS 328 B CYS 358 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf3 B SG CYS 345 B CYS 375 1_555 B SG CYS 348 B CYS 378 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf4 B SG CYS 427 B CYS 457 1_555 B SG CYS 497 B CYS 527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf5 B SG CYS 447 B CYS 477 1_555 B SG CYS 496 B CYS 526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf6 B SG CYS 456 B CYS 486 1_555 B SG CYS 479 B CYS 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf7 B SG CYS 504 B CYS 534 1_555 B SG CYS 571 B CYS 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf8 B SG CYS 522 B CYS 552 1_555 B SG CYS 570 B CYS 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf9 B SG CYS 532 B CYS 562 1_555 B SG CYS 558 B CYS 588 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf10 B SG CYS 578 B CYS 608 1_555 B SG CYS 649 B CYS 679 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf11 B SG CYS 596 B CYS 626 1_555 B SG CYS 648 B CYS 678 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf12 B SG CYS 605 B CYS 635 1_555 B SG CYS 624 B CYS 654 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf13 C SG CYS 22 H CYS 22 1_555 C SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf14 C SG CYS 145 H CYS 145 1_555 C SG CYS 201 H CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf15 D SG CYS 23 L CYS 23 1_555 D SG CYS 88 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf16 D SG CYS 135 L CYS 135 1_555 D SG CYS 195 L CYS 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? # _chem_comp.formula 'C28 H30 F N3 O6 S' _chem_comp.formula_weight 555.618 _chem_comp.id PVJ _chem_comp.mon_nstd_flag . _chem_comp.name '2-fluoro-4-{[(1R)-1-methyl-6-{[(2S)-oxan-2-yl]methoxy}-1-{2-oxo-2-[(1,3-thiazol-2-yl)amino]ethyl}-1,2,3,4-tetrahydroisoquinolin-7-yl]oxy}benzoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C24 C23 PVJ doub 277 n y C24 S PVJ sing 278 n y C23 N22 PVJ sing 279 n y S C21 PVJ sing 280 n y N22 C21 PVJ doub 281 n y C21 N20 PVJ sing 282 n n O19 C18 PVJ doub 283 n n N20 C18 PVJ sing 284 n n C18 C17 PVJ sing 285 n n O33 C32 PVJ doub 286 n n C17 C1 PVJ sing 287 n n C32 O34 PVJ sing 288 n n C32 C13 PVJ sing 289 n n C13 C14 PVJ doub 290 n y C13 C12 PVJ sing 291 n y F C12 PVJ sing 292 n n C14 C15 PVJ sing 293 n y C12 C11 PVJ doub 294 n y C16 C1 PVJ sing 295 n n C1 N PVJ sing 296 n n C1 C2 PVJ sing 297 n n C15 C10 PVJ doub 298 n y C11 C10 PVJ sing 299 n y C10 O9 PVJ sing 300 n n N C PVJ sing 301 n n C5 C2 PVJ doub 302 n y C5 C6 PVJ sing 303 n y C2 C3 PVJ sing 304 n y O9 C6 PVJ sing 305 n n C C4 PVJ sing 306 n n C6 C7 PVJ doub 307 n y C3 C4 PVJ sing 308 n n C3 C8 PVJ doub 309 n y C7 C8 PVJ sing 310 n y C7 O PVJ sing 311 n n O C25 PVJ sing 312 n n C30 C31 PVJ sing 313 n n C30 C29 PVJ sing 314 n n C26 C31 PVJ sing 315 n n C26 C25 PVJ sing 316 n n C26 O27 PVJ sing 317 n n C29 C28 PVJ sing 318 n n C28 O27 PVJ sing 319 n n N H1 PVJ sing 320 n n C H3 PVJ sing 321 n n C H4 PVJ sing 322 n n C11 H5 PVJ sing 323 n n C14 H6 PVJ sing 324 n n C15 H7 PVJ sing 325 n n C16 H8 PVJ sing 326 n n C16 H9 PVJ sing 327 n n C16 H10 PVJ sing 328 n n C17 H11 PVJ sing 329 n n C17 H12 PVJ sing 330 n n C23 H13 PVJ sing 331 n n C24 H14 PVJ sing 332 n n C25 H15 PVJ sing 333 n n C25 H16 PVJ sing 334 n n C26 H17 PVJ sing 335 n n C28 H18 PVJ sing 336 n n C28 H19 PVJ sing 337 n n C29 H20 PVJ sing 338 n n C29 H21 PVJ sing 339 n n C30 H22 PVJ sing 340 n n C30 H23 PVJ sing 341 n n C31 H24 PVJ sing 342 n n C31 H25 PVJ sing 343 n n C4 H26 PVJ sing 344 n n C4 H27 PVJ sing 345 n n C5 H28 PVJ sing 346 n n C8 H29 PVJ sing 347 n n N20 H30 PVJ sing 348 n n O34 H31 PVJ sing 349 n n # _atom_sites.entry_id 6U38 _atom_sites.fract_transf_matrix[1][1] 0.00645 _atom_sites.fract_transf_matrix[1][2] 0.003724 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007448 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006582 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 PVJ B 1 801 1 PVJ UNL . F 5 HOH A 1 801 37 HOH HOH . F 5 HOH A 2 802 24 HOH HOH . F 5 HOH A 3 803 2 HOH HOH . F 5 HOH A 4 804 51 HOH HOH . F 5 HOH A 5 805 29 HOH HOH . F 5 HOH A 6 806 28 HOH HOH . F 5 HOH A 7 807 58 HOH HOH . G 5 HOH B 1 901 56 HOH HOH . G 5 HOH B 2 902 35 HOH HOH . G 5 HOH B 3 903 39 HOH HOH . G 5 HOH B 4 904 4 HOH HOH . G 5 HOH B 5 905 53 HOH HOH . G 5 HOH B 6 906 47 HOH HOH . G 5 HOH B 7 907 49 HOH HOH . G 5 HOH B 8 908 8 HOH HOH . G 5 HOH B 9 909 38 HOH HOH . G 5 HOH B 10 910 34 HOH HOH . G 5 HOH B 11 911 17 HOH HOH . G 5 HOH B 12 912 25 HOH HOH . G 5 HOH B 13 913 36 HOH HOH . G 5 HOH B 14 914 46 HOH HOH . G 5 HOH B 15 915 26 HOH HOH . G 5 HOH B 16 916 50 HOH HOH . G 5 HOH B 17 917 10 HOH HOH . G 5 HOH B 18 918 27 HOH HOH . G 5 HOH B 19 919 15 HOH HOH . G 5 HOH B 20 920 12 HOH HOH . G 5 HOH B 21 921 21 HOH HOH . G 5 HOH B 22 922 22 HOH HOH . G 5 HOH B 23 923 7 HOH HOH . G 5 HOH B 24 924 6 HOH HOH . G 5 HOH B 25 925 40 HOH HOH . G 5 HOH B 26 926 32 HOH HOH . G 5 HOH B 27 927 19 HOH HOH . G 5 HOH B 28 928 54 HOH HOH . G 5 HOH B 29 929 30 HOH HOH . H 5 HOH H 1 301 48 HOH HOH . H 5 HOH H 2 302 52 HOH HOH . H 5 HOH H 3 303 1 HOH HOH . H 5 HOH H 4 304 42 HOH HOH . H 5 HOH H 5 305 43 HOH HOH . H 5 HOH H 6 306 3 HOH HOH . H 5 HOH H 7 307 41 HOH HOH . H 5 HOH H 8 308 13 HOH HOH . H 5 HOH H 9 309 45 HOH HOH . H 5 HOH H 10 310 20 HOH HOH . H 5 HOH H 11 311 57 HOH HOH . H 5 HOH H 12 312 55 HOH HOH . H 5 HOH H 13 313 16 HOH HOH . H 5 HOH H 14 314 11 HOH HOH . H 5 HOH H 15 315 33 HOH HOH . H 5 HOH H 16 316 44 HOH HOH . H 5 HOH H 17 317 18 HOH HOH . H 5 HOH H 18 318 14 HOH HOH . H 5 HOH H 19 319 23 HOH HOH . H 5 HOH H 20 320 31 HOH HOH . I 5 HOH L 1 301 5 HOH HOH . I 5 HOH L 2 302 9 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N PVJ . . . E 4 -67.384 43.951 -23.135 1 34.3 ? N PVJ 801 B 1 HETATM 2 C C PVJ . . . E 4 -66.087 43.467 -22.576 1 32.27 ? C PVJ 801 B 1 HETATM 3 O O PVJ . . . E 4 -64.78 49.107 -20.5 1 36.99 ? O PVJ 801 B 1 HETATM 4 C C1 PVJ . . . E 4 -67.364 45.313 -23.744 1 35.58 ? C1 PVJ 801 B 1 HETATM 5 C C10 PVJ . . . E 4 -65.297 50.586 -23.157 1 36.92 ? C10 PVJ 801 B 1 HETATM 6 C C11 PVJ . . . E 4 -65.488 51.937 -23.333 1 38.24 ? C11 PVJ 801 B 1 HETATM 7 C C12 PVJ . . . E 4 -64.452 52.697 -23.812 1 41.11 ? C12 PVJ 801 B 1 HETATM 8 C C13 PVJ . . . E 4 -63.234 52.124 -24.118 1 39.81 ? C13 PVJ 801 B 1 HETATM 9 C C14 PVJ . . . E 4 -63.048 50.77 -23.951 1 38.62 ? C14 PVJ 801 B 1 HETATM 10 C C15 PVJ . . . E 4 -64.084 49.998 -23.478 1 37.96 ? C15 PVJ 801 B 1 HETATM 11 C C16 PVJ . . . E 4 -68.808 45.773 -23.76 1 34.51 ? C16 PVJ 801 B 1 HETATM 12 C C17 PVJ . . . E 4 -66.775 45.138 -25.148 1 36.84 ? C17 PVJ 801 B 1 HETATM 13 C C18 PVJ . . . E 4 -66.487 46.394 -25.907 1 37.72 ? C18 PVJ 801 B 1 HETATM 14 C C2 PVJ . . . E 4 -66.631 46.29 -22.887 1 34.65 ? C2 PVJ 801 B 1 HETATM 15 C C21 PVJ . . . E 4 -64.536 47.768 -26.497 1 35.79 ? C21 PVJ 801 B 1 HETATM 16 C C23 PVJ . . . E 4 -62.984 49.21 -27.09 1 32.42 ? C23 PVJ 801 B 1 HETATM 17 C C24 PVJ . . . E 4 -64.084 50.026 -27.221 1 33.5 ? C24 PVJ 801 B 1 HETATM 18 C C25 PVJ . . . E 4 -63.488 48.763 -20.046 1 38.05 ? C25 PVJ 801 B 1 HETATM 19 C C26 PVJ . . . E 4 -62.905 50.135 -20.077 1 37.77 ? C26 PVJ 801 B 1 HETATM 20 C C28 PVJ . . . E 4 -63.342 52.355 -19.517 1 38.7 ? C28 PVJ 801 B 1 HETATM 21 C C29 PVJ . . . E 4 -61.849 52.67 -19.562 1 36.98 ? C29 PVJ 801 B 1 HETATM 22 C C3 PVJ . . . E 4 -65.805 45.864 -21.865 1 33.39 ? C3 PVJ 801 B 1 HETATM 23 C C30 PVJ . . . E 4 -61.061 51.671 -20.405 1 37.58 ? C30 PVJ 801 B 1 HETATM 24 C C31 PVJ . . . E 4 -61.399 50.229 -20.065 1 37.6 ? C31 PVJ 801 B 1 HETATM 25 C C32 PVJ . . . E 4 -62.122 52.941 -24.6 1 40.27 ? C32 PVJ 801 B 1 HETATM 26 C C4 PVJ . . . E 4 -65.585 44.433 -21.53 1 31.43 ? C4 PVJ 801 B 1 HETATM 27 C C5 PVJ . . . E 4 -66.792 47.641 -23.104 1 34.61 ? C5 PVJ 801 B 1 HETATM 28 C C6 PVJ . . . E 4 -66.15 48.558 -22.323 1 34.6 ? C6 PVJ 801 B 1 HETATM 29 C C7 PVJ . . . E 4 -65.348 48.133 -21.289 1 34.43 ? C7 PVJ 801 B 1 HETATM 30 C C8 PVJ . . . E 4 -65.17 46.786 -21.064 1 33.76 ? C8 PVJ 801 B 1 HETATM 31 F F PVJ . . . E 4 -64.663 54.009 -23.972 1 44.12 ? F PVJ 801 B 1 HETATM 32 N N20 PVJ . . . E 4 -65.133 46.587 -26.079 1 36.37 ? N20 PVJ 801 B 1 HETATM 33 N N22 PVJ . . . E 4 -63.242 47.928 -26.68 1 34.02 ? N22 PVJ 801 B 1 HETATM 34 O O19 PVJ . . . E 4 -67.395 47.097 -26.317 1 38.06 ? O19 PVJ 801 B 1 HETATM 35 O O27 PVJ . . . E 4 -63.554 50.987 -19.13 1 39.03 ? O27 PVJ 801 B 1 HETATM 36 O O33 PVJ . . . E 4 -61.274 52.403 -25.342 1 40.19 ? O33 PVJ 801 B 1 HETATM 37 O O34 PVJ . . . E 4 -62.096 54.127 -24.182 1 42.4 ? O34 PVJ 801 B 1 HETATM 38 O O9 PVJ . . . E 4 -66.381 49.885 -22.633 1 35.44 ? O9 PVJ 801 B 1 HETATM 39 S S PVJ . . . E 4 -65.506 49.159 -26.816 1 35.74 ? S PVJ 801 B 1 # _model_server_stats.io_time_ms 51 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 413 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 39 #