data_6U3P
#
_model_server_result.job_id            hPTjR0mEYX7ItpRURHulvQ 
_model_server_result.datetime_utc      '2024-11-23 23:28:23' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6u3p 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":601}' 
#
_entry.id    6U3P 
#
_exptl.entry_id    6U3P 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6U3P 
_cell.length_a            125.407 
_cell.length_b            125.407 
_cell.length_c            129.826 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6U3P 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        144 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
B,D,F 1 1 
A,C,E 1 2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 3_554 -x+y,-x,z-1/3 -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 -43.275333 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 72 A CYS 69 1_555 A SG CYS 99 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf2 A SG CYS 260 A CYS 257 1_555 A SG CYS 275 A CYS 272 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf3 A SG CYS 412 A CYS 409 1_555 A SG CYS 532 A CYS 529 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf4 B SG CYS 72 B CYS 69 1_555 B SG CYS 99 B CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf5 B SG CYS 260 B CYS 257 1_555 B SG CYS 275 B CYS 272 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf6 B SG CYS 412 B CYS 409 1_555 B SG CYS 532 B CYS 529 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 83 n n 
S C1 DMS sing 84 n n 
S C2 DMS sing 85 n n 
C1 H11 DMS sing 86 n n 
C1 H12 DMS sing 87 n n 
C1 H13 DMS sing 88 n n 
C2 H21 DMS sing 89 n n 
C2 H22 DMS sing 90 n n 
C2 H23 DMS sing 91 n n 
#
_atom_sites.entry_id                     6U3P 
_atom_sites.fract_transf_matrix[1][1]    0.007974 
_atom_sites.fract_transf_matrix[1][2]    0.004604 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009208 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007703 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 PQY A 1 601 5 PQY LIG . 
D 3 DMS B 1 601 504 DMS DMS . 
E 4 HOH A 1 701 26 HOH HOH . 
E 4 HOH A 2 702 2 HOH HOH . 
E 4 HOH A 3 703 6 HOH HOH . 
E 4 HOH A 4 704 8 HOH HOH . 
E 4 HOH A 5 705 33 HOH HOH . 
E 4 HOH A 6 706 32 HOH HOH . 
E 4 HOH A 7 707 75 HOH HOH . 
E 4 HOH A 8 708 70 HOH HOH . 
E 4 HOH A 9 709 72 HOH HOH . 
E 4 HOH A 10 710 34 HOH HOH . 
E 4 HOH A 11 711 69 HOH HOH . 
E 4 HOH A 12 712 64 HOH HOH . 
E 4 HOH A 13 713 9 HOH HOH . 
E 4 HOH A 14 714 39 HOH HOH . 
E 4 HOH A 15 715 29 HOH HOH . 
E 4 HOH A 16 716 59 HOH HOH . 
E 4 HOH A 17 717 3 HOH HOH . 
E 4 HOH A 18 718 31 HOH HOH . 
E 4 HOH A 19 719 15 HOH HOH . 
E 4 HOH A 20 720 38 HOH HOH . 
E 4 HOH A 21 721 73 HOH HOH . 
E 4 HOH A 22 722 28 HOH HOH . 
E 4 HOH A 23 723 71 HOH HOH . 
E 4 HOH A 24 724 40 HOH HOH . 
E 4 HOH A 25 725 41 HOH HOH . 
E 4 HOH A 26 726 43 HOH HOH . 
E 4 HOH A 27 727 62 HOH HOH . 
E 4 HOH A 28 728 35 HOH HOH . 
E 4 HOH A 29 729 67 HOH HOH . 
E 4 HOH A 30 730 36 HOH HOH . 
E 4 HOH A 31 731 37 HOH HOH . 
E 4 HOH A 32 732 68 HOH HOH . 
F 4 HOH B 1 701 52 HOH HOH . 
F 4 HOH B 2 702 57 HOH HOH . 
F 4 HOH B 3 703 48 HOH HOH . 
F 4 HOH B 4 704 30 HOH HOH . 
F 4 HOH B 5 705 63 HOH HOH . 
F 4 HOH B 6 706 5 HOH HOH . 
F 4 HOH B 7 707 24 HOH HOH . 
F 4 HOH B 8 708 60 HOH HOH . 
F 4 HOH B 9 709 17 HOH HOH . 
F 4 HOH B 10 710 47 HOH HOH . 
F 4 HOH B 11 711 1 HOH HOH . 
F 4 HOH B 12 712 20 HOH HOH . 
F 4 HOH B 13 713 4 HOH HOH . 
F 4 HOH B 14 714 54 HOH HOH . 
F 4 HOH B 15 715 51 HOH HOH . 
F 4 HOH B 16 716 61 HOH HOH . 
F 4 HOH B 17 717 7 HOH HOH . 
F 4 HOH B 18 718 65 HOH HOH . 
F 4 HOH B 19 719 10 HOH HOH . 
F 4 HOH B 20 720 25 HOH HOH . 
F 4 HOH B 21 721 44 HOH HOH . 
F 4 HOH B 22 722 66 HOH HOH . 
F 4 HOH B 23 723 13 HOH HOH . 
F 4 HOH B 24 724 46 HOH HOH . 
F 4 HOH B 25 725 45 HOH HOH . 
F 4 HOH B 26 726 74 HOH HOH . 
F 4 HOH B 27 727 27 HOH HOH . 
F 4 HOH B 28 728 11 HOH HOH . 
F 4 HOH B 29 729 14 HOH HOH . 
F 4 HOH B 30 730 18 HOH HOH . 
F 4 HOH B 31 731 22 HOH HOH . 
F 4 HOH B 32 732 53 HOH HOH . 
F 4 HOH B 33 733 56 HOH HOH . 
F 4 HOH B 34 734 49 HOH HOH . 
F 4 HOH B 35 735 42 HOH HOH . 
F 4 HOH B 36 736 55 HOH HOH . 
F 4 HOH B 37 737 50 HOH HOH . 
F 4 HOH B 38 738 12 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . D 3 29.477 -26.945 -17.531 0.7 85.43 ? S DMS 601 B 1 
HETATM 2 O O DMS . . . D 3 28.919 -28.07 -16.799 0.7 68.91 ? O DMS 601 B 1 
HETATM 3 C C1 DMS . . . D 3 30.744 -26.308 -16.619 0.7 61.66 ? C1 DMS 601 B 1 
HETATM 4 C C2 DMS . . . D 3 30.41 -27.364 -18.866 0.7 44.07 ? C2 DMS 601 B 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           277 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#