data_6U4P # _model_server_result.job_id guofcNRkendNv6utgKwMJw _model_server_result.datetime_utc '2024-11-28 06:20:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6u4p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"PA","auth_seq_id":402}' # _entry.id 6U4P # _exptl.entry_id 6U4P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 380.523 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description fos-choline-14 _entity.pdbx_number_of_molecules 14 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 91.84 _cell.angle_gamma 90 _cell.entry_id 6U4P _cell.length_a 151.174 _cell.length_b 134.616 _cell.length_c 130.697 _cell.Z_PDB 28 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6U4P _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details heptameric _pdbx_struct_assembly.oligomeric_count 7 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 H N N ? 2 I N N ? 2 Q N N ? 2 R N N ? 2 V N N ? 2 W N N ? 2 CA N N ? 2 DA N N ? 2 HA N N ? 2 IA N N ? 2 OA N N ? 2 PA N N ? 2 UA N N ? 2 VA N N # _chem_comp.formula 'C19 H43 N O4 P' _chem_comp.formula_weight 380.523 _chem_comp.id PQJ _chem_comp.mon_nstd_flag . _chem_comp.name fos-choline-14 _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'tetradecyl 2-(trimethyl-$l^{4}-azanyl)ethyl hydrogen phosphate' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C13 C12 PQJ sing 247 n n O3 P1 PQJ doub 248 n n C12 C11 PQJ sing 249 n n C5 N1 PQJ sing 250 n n O2 P1 PQJ sing 251 n n P1 O4 PQJ sing 252 n n P1 O1 PQJ sing 253 n n C4 N1 PQJ sing 254 n n N1 C3 PQJ sing 255 n n N1 C2 PQJ sing 256 n n C11 C10 PQJ sing 257 n n C10 C9 PQJ sing 258 n n O4 C1 PQJ sing 259 n n C1 C2 PQJ sing 260 n n O1 C6 PQJ sing 261 n n C6 C7 PQJ sing 262 n n C7 C8 PQJ sing 263 n n C9 C8 PQJ sing 264 n n C10 H1 PQJ sing 265 n n C10 H2 PQJ sing 266 n n C11 H3 PQJ sing 267 n n C11 H4 PQJ sing 268 n n C12 H5 PQJ sing 269 n n C12 H6 PQJ sing 270 n n C13 H7 PQJ sing 271 n n C13 H8 PQJ sing 272 n n O2 H10 PQJ sing 273 n n C1 H11 PQJ sing 274 n n C1 H12 PQJ sing 275 n n C2 H13 PQJ sing 276 n n C2 H14 PQJ sing 277 n n C5 H15 PQJ sing 278 n n C5 H16 PQJ sing 279 n n C5 H17 PQJ sing 280 n n C4 H18 PQJ sing 281 n n C4 H19 PQJ sing 282 n n C4 H20 PQJ sing 283 n n C3 H21 PQJ sing 284 n n C3 H22 PQJ sing 285 n n C3 H23 PQJ sing 286 n n C6 H24 PQJ sing 287 n n C6 H25 PQJ sing 288 n n C7 H26 PQJ sing 289 n n C7 H27 PQJ sing 290 n n C8 H28 PQJ sing 291 n n C8 H29 PQJ sing 292 n n C9 H30 PQJ sing 293 n n C9 H31 PQJ sing 294 n n C13 C14 PQJ sing 295 n n C14 C15 PQJ sing 296 n n C15 C16 PQJ sing 297 n n C16 C17 PQJ sing 298 n n C17 C18 PQJ sing 299 n n C18 C19 PQJ sing 300 n n C14 H9 PQJ sing 301 n n C14 H32 PQJ sing 302 n n C15 H33 PQJ sing 303 n n C15 H34 PQJ sing 304 n n C16 H35 PQJ sing 305 n n C16 H36 PQJ sing 306 n n C17 H37 PQJ sing 307 n n C17 H38 PQJ sing 308 n n C18 H39 PQJ sing 309 n n C18 H40 PQJ sing 310 n n C19 H41 PQJ sing 311 n n C19 H42 PQJ sing 312 n n C19 H43 PQJ sing 313 n n # _atom_sites.entry_id 6U4P _atom_sites.fract_transf_matrix[1][1] 0.006615 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000213 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007429 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007655 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code H 2 PQJ A 1 401 401 PQJ X14 . I 2 PQJ A 1 402 402 PQJ X14 . J 3 SO4 A 1 403 1 SO4 SO4 . K 3 SO4 A 1 404 8 SO4 SO4 . L 3 SO4 A 1 405 12 SO4 SO4 . M 3 SO4 A 1 406 18 SO4 SO4 . N 3 SO4 A 1 407 19 SO4 SO4 . O 3 SO4 A 1 408 29 SO4 SO4 . P 3 SO4 A 1 409 33 SO4 SO4 . Q 2 PQJ B 1 401 401 PQJ X14 . R 2 PQJ B 1 402 402 PQJ X14 . S 3 SO4 B 1 403 2 SO4 SO4 . T 3 SO4 B 1 404 20 SO4 SO4 . U 3 SO4 B 1 405 21 SO4 SO4 . V 2 PQJ C 1 401 401 PQJ X14 . W 2 PQJ C 1 402 402 PQJ X14 . X 3 SO4 C 1 403 3 SO4 SO4 . Y 3 SO4 C 1 404 9 SO4 SO4 . Z 3 SO4 C 1 405 13 SO4 SO4 . AA 3 SO4 C 1 406 22 SO4 SO4 . BA 3 SO4 C 1 407 30 SO4 SO4 . CA 2 PQJ D 1 401 401 PQJ X14 . DA 2 PQJ D 1 402 402 PQJ X14 . EA 3 SO4 D 1 403 4 SO4 SO4 . FA 3 SO4 D 1 404 14 SO4 SO4 . GA 3 SO4 D 1 405 23 SO4 SO4 . HA 2 PQJ E 1 401 401 PQJ X14 . IA 2 PQJ E 1 402 402 PQJ X14 . JA 3 SO4 E 1 403 5 SO4 SO4 . KA 3 SO4 E 1 404 10 SO4 SO4 . LA 3 SO4 E 1 405 15 SO4 SO4 . MA 3 SO4 E 1 406 24 SO4 SO4 . NA 3 SO4 E 1 407 31 SO4 SO4 . OA 2 PQJ F 1 401 401 PQJ X14 . PA 2 PQJ F 1 402 402 PQJ X14 . QA 3 SO4 F 1 403 6 SO4 SO4 . RA 3 SO4 F 1 404 16 SO4 SO4 . SA 3 SO4 F 1 405 25 SO4 SO4 . TA 3 SO4 F 1 406 32 SO4 SO4 . UA 2 PQJ G 1 401 401 PQJ X14 . VA 2 PQJ G 1 402 402 PQJ X14 . WA 3 SO4 G 1 403 7 SO4 SO4 . XA 3 SO4 G 1 404 11 SO4 SO4 . YA 3 SO4 G 1 405 17 SO4 SO4 . ZA 3 SO4 G 1 406 26 SO4 SO4 . AB 3 SO4 G 1 407 27 SO4 SO4 . BB 3 SO4 G 1 408 28 SO4 SO4 . CB 4 HOH A 1 501 17 HOH HOH . CB 4 HOH A 2 502 36 HOH HOH . CB 4 HOH A 3 503 71 HOH HOH . CB 4 HOH A 4 504 35 HOH HOH . CB 4 HOH A 5 505 6 HOH HOH . CB 4 HOH A 6 506 39 HOH HOH . CB 4 HOH A 7 507 54 HOH HOH . CB 4 HOH A 8 508 47 HOH HOH . CB 4 HOH A 9 509 14 HOH HOH . CB 4 HOH A 10 510 92 HOH HOH . CB 4 HOH A 11 511 74 HOH HOH . CB 4 HOH A 12 512 80 HOH HOH . CB 4 HOH A 13 513 91 HOH HOH . DB 4 HOH B 1 501 15 HOH HOH . DB 4 HOH B 2 502 3 HOH HOH . DB 4 HOH B 3 503 18 HOH HOH . DB 4 HOH B 4 504 58 HOH HOH . DB 4 HOH B 5 505 104 HOH HOH . DB 4 HOH B 6 506 28 HOH HOH . DB 4 HOH B 7 507 75 HOH HOH . DB 4 HOH B 8 508 90 HOH HOH . DB 4 HOH B 9 509 37 HOH HOH . DB 4 HOH B 10 510 87 HOH HOH . DB 4 HOH B 11 511 101 HOH HOH . DB 4 HOH B 12 512 40 HOH HOH . DB 4 HOH B 13 513 88 HOH HOH . EB 4 HOH C 1 501 107 HOH HOH . EB 4 HOH C 2 502 95 HOH HOH . EB 4 HOH C 3 503 66 HOH HOH . EB 4 HOH C 4 504 8 HOH HOH . EB 4 HOH C 5 505 24 HOH HOH . EB 4 HOH C 6 506 96 HOH HOH . EB 4 HOH C 7 507 77 HOH HOH . EB 4 HOH C 8 508 1 HOH HOH . EB 4 HOH C 9 509 57 HOH HOH . EB 4 HOH C 10 510 12 HOH HOH . EB 4 HOH C 11 511 70 HOH HOH . EB 4 HOH C 12 512 94 HOH HOH . EB 4 HOH C 13 513 89 HOH HOH . EB 4 HOH C 14 514 65 HOH HOH . EB 4 HOH C 15 515 110 HOH HOH . FB 4 HOH D 1 501 68 HOH HOH . FB 4 HOH D 2 502 42 HOH HOH . FB 4 HOH D 3 503 20 HOH HOH . FB 4 HOH D 4 504 105 HOH HOH . FB 4 HOH D 5 505 79 HOH HOH . FB 4 HOH D 6 506 38 HOH HOH . FB 4 HOH D 7 507 34 HOH HOH . FB 4 HOH D 8 508 55 HOH HOH . FB 4 HOH D 9 509 4 HOH HOH . FB 4 HOH D 10 510 56 HOH HOH . FB 4 HOH D 11 511 2 HOH HOH . FB 4 HOH D 12 512 64 HOH HOH . FB 4 HOH D 13 513 43 HOH HOH . FB 4 HOH D 14 514 73 HOH HOH . FB 4 HOH D 15 515 23 HOH HOH . FB 4 HOH D 16 516 83 HOH HOH . FB 4 HOH D 17 517 30 HOH HOH . FB 4 HOH D 18 518 46 HOH HOH . FB 4 HOH D 19 519 62 HOH HOH . FB 4 HOH D 20 520 72 HOH HOH . FB 4 HOH D 21 521 114 HOH HOH . FB 4 HOH D 22 522 81 HOH HOH . GB 4 HOH E 1 501 103 HOH HOH . GB 4 HOH E 2 502 9 HOH HOH . GB 4 HOH E 3 503 59 HOH HOH . GB 4 HOH E 4 504 26 HOH HOH . GB 4 HOH E 5 505 51 HOH HOH . GB 4 HOH E 6 506 86 HOH HOH . GB 4 HOH E 7 507 10 HOH HOH . GB 4 HOH E 8 508 82 HOH HOH . GB 4 HOH E 9 509 13 HOH HOH . GB 4 HOH E 10 510 33 HOH HOH . GB 4 HOH E 11 511 78 HOH HOH . GB 4 HOH E 12 512 25 HOH HOH . GB 4 HOH E 13 513 113 HOH HOH . GB 4 HOH E 14 514 99 HOH HOH . GB 4 HOH E 15 515 63 HOH HOH . HB 4 HOH F 1 501 19 HOH HOH . HB 4 HOH F 2 502 16 HOH HOH . HB 4 HOH F 3 503 106 HOH HOH . HB 4 HOH F 4 504 52 HOH HOH . HB 4 HOH F 5 505 31 HOH HOH . HB 4 HOH F 6 506 22 HOH HOH . HB 4 HOH F 7 507 27 HOH HOH . HB 4 HOH F 8 508 67 HOH HOH . HB 4 HOH F 9 509 69 HOH HOH . HB 4 HOH F 10 510 7 HOH HOH . HB 4 HOH F 11 511 44 HOH HOH . HB 4 HOH F 12 512 60 HOH HOH . HB 4 HOH F 13 513 53 HOH HOH . HB 4 HOH F 14 514 61 HOH HOH . HB 4 HOH F 15 515 32 HOH HOH . HB 4 HOH F 16 516 29 HOH HOH . HB 4 HOH F 17 517 41 HOH HOH . HB 4 HOH F 18 518 45 HOH HOH . HB 4 HOH F 19 519 76 HOH HOH . HB 4 HOH F 20 520 109 HOH HOH . HB 4 HOH F 21 521 102 HOH HOH . HB 4 HOH F 22 522 85 HOH HOH . HB 4 HOH F 23 523 98 HOH HOH . HB 4 HOH F 24 524 100 HOH HOH . HB 4 HOH F 25 525 108 HOH HOH . IB 4 HOH G 1 501 21 HOH HOH . IB 4 HOH G 2 502 84 HOH HOH . IB 4 HOH G 3 503 112 HOH HOH . IB 4 HOH G 4 504 97 HOH HOH . IB 4 HOH G 5 505 48 HOH HOH . IB 4 HOH G 6 506 111 HOH HOH . IB 4 HOH G 7 507 5 HOH HOH . IB 4 HOH G 8 508 11 HOH HOH . IB 4 HOH G 9 509 93 HOH HOH . IB 4 HOH G 10 510 49 HOH HOH . IB 4 HOH G 11 511 50 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2 PQJ . . . PA 2 -58.758 49.814 36.565 1 95.49 ? O2 PQJ 402 F 1 HETATM 2 P P1 PQJ . . . PA 2 -58.191 50.335 35.278 1 95.4 ? P1 PQJ 402 F 1 HETATM 3 O O3 PQJ . . . PA 2 -58.598 49.53 34.066 1 104.71 ? O3 PQJ 402 F 1 HETATM 4 O O4 PQJ . . . PA 2 -56.564 50.431 35.27 1 101.26 ? O4 PQJ 402 F 1 HETATM 5 C C1 PQJ . . . PA 2 -55.837 51.371 34.455 1 100.76 ? C1 PQJ 402 F 1 HETATM 6 C C2 PQJ . . . PA 2 -54.732 52.097 35.253 1 106.35 ? C2 PQJ 402 F 1 HETATM 7 N N1 PQJ . . . PA 2 -53.391 52.121 34.607 1 118.07 ? N1 PQJ 402 F 1 HETATM 8 C C5 PQJ . . . PA 2 -52.711 53.419 34.809 1 107.36 ? C5 PQJ 402 F 1 HETATM 9 C C4 PQJ . . . PA 2 -52.575 51.103 35.278 1 116.04 ? C4 PQJ 402 F 1 HETATM 10 C C3 PQJ . . . PA 2 -53.423 51.839 33.146 1 127.79 ? C3 PQJ 402 F 1 HETATM 11 O O1 PQJ . . . PA 2 -58.581 51.909 35.232 1 79.43 ? O1 PQJ 402 F 1 # _model_server_stats.io_time_ms 36 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 11 #