data_6U61 # _model_server_result.job_id FYvm0efh2fHoVpIDU3GUTA _model_server_result.datetime_utc '2024-11-28 16:25:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6u61 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":201}' # _entry.id 6U61 # _exptl.entry_id 6U61 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6U61 _cell.length_a 69.538 _cell.length_b 86.752 _cell.length_c 115.48 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6U61 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,H,J 1 1 B,D,G,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C C ACE 1 E ACE 0 1_555 C N TRP 2 E TRP 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 C CH3 ACE 1 E ACE 0 1_555 C SG CYS 12 E CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.767 ? covale ? covale3 C C PRO 6 E PRO 5 1_555 C N ALY 7 E ALY 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale4 C C ALY 7 E ALY 6 1_555 C N VAL 8 E VAL 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale5 C C LYS 9 E LYS 8 1_555 C N ALY 10 E ALY 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale6 C C ALY 10 E ALY 9 1_555 C N GLY 11 E GLY 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale7 C C CYS 12 E CYS 11 1_555 C N NH2 13 E NH2 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.431 ? covale ? covale8 D C ACE 1 D ACE 0 1_555 D N TRP 2 D TRP 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale9 D CH3 ACE 1 D ACE 0 1_555 D SG CYS 12 D CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.767 ? covale ? covale10 D C PRO 6 D PRO 5 1_555 D N ALY 7 D ALY 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale11 D C ALY 7 D ALY 6 1_555 D N VAL 8 D VAL 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale12 D C LYS 9 D LYS 8 1_555 D N ALY 10 D ALY 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale13 D C ALY 10 D ALY 9 1_555 D N GLY 11 D GLY 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale14 D C CYS 12 D CYS 11 1_555 D N NH2 13 D NH2 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? metalc ? metalc1 A NE2 HIS 25 A HIS 83 1_555 E ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? metalc ? metalc2 A ND1 HIS 56 A HIS 114 1_555 F ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? metalc ? metalc3 A OE2 GLU 73 A GLU 131 1_555 E ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? metalc ? metalc4 E ZN ZN . A ZN 201 8_445 B OE2 GLU 125 B GLU 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? metalc ? metalc5 E ZN ZN . A ZN 201 1_555 I O HOH . B HOH 326 8_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc6 B NE2 HIS 25 B HIS 83 1_555 G ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc7 B OE2 GLU 73 B GLU 131 1_555 G ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc8 G ZN ZN . B ZN 201 1_555 I O HOH . B HOH 328 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.979 ? metalc ? metalc9 G ZN ZN . B ZN 201 1_555 I O HOH . B HOH 331 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.69 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6U61 _atom_sites.fract_transf_matrix[1][1] 0.014381 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011527 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00866 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ZN A 1 201 201 ZN ZN . F 3 ZN A 1 202 202 ZN ZN . G 3 ZN B 1 201 201 ZN ZN . H 4 HOH A 1 301 301 HOH HOH . H 4 HOH A 2 302 302 HOH HOH . H 4 HOH A 3 303 303 HOH HOH . H 4 HOH A 4 304 304 HOH HOH . H 4 HOH A 5 305 305 HOH HOH . H 4 HOH A 6 306 306 HOH HOH . H 4 HOH A 7 307 307 HOH HOH . H 4 HOH A 8 308 308 HOH HOH . H 4 HOH A 9 309 309 HOH HOH . H 4 HOH A 10 310 310 HOH HOH . H 4 HOH A 11 311 311 HOH HOH . H 4 HOH A 12 312 312 HOH HOH . H 4 HOH A 13 313 313 HOH HOH . H 4 HOH A 14 314 314 HOH HOH . H 4 HOH A 15 315 315 HOH HOH . H 4 HOH A 16 316 316 HOH HOH . H 4 HOH A 17 317 317 HOH HOH . H 4 HOH A 18 318 318 HOH HOH . H 4 HOH A 19 319 319 HOH HOH . H 4 HOH A 20 320 320 HOH HOH . H 4 HOH A 21 321 321 HOH HOH . H 4 HOH A 22 322 322 HOH HOH . H 4 HOH A 23 323 323 HOH HOH . H 4 HOH A 24 324 325 HOH HOH . H 4 HOH A 25 325 324 HOH HOH . H 4 HOH A 26 326 326 HOH HOH . H 4 HOH A 27 327 327 HOH HOH . H 4 HOH A 28 328 328 HOH HOH . H 4 HOH A 29 329 329 HOH HOH . H 4 HOH A 30 330 330 HOH HOH . H 4 HOH A 31 331 331 HOH HOH . H 4 HOH A 32 332 332 HOH HOH . H 4 HOH A 33 333 333 HOH HOH . H 4 HOH A 34 334 334 HOH HOH . I 4 HOH B 1 301 301 HOH HOH . I 4 HOH B 2 302 302 HOH HOH . I 4 HOH B 3 303 303 HOH HOH . I 4 HOH B 4 304 304 HOH HOH . I 4 HOH B 5 305 305 HOH HOH . I 4 HOH B 6 306 306 HOH HOH . I 4 HOH B 7 307 307 HOH HOH . I 4 HOH B 8 308 308 HOH HOH . I 4 HOH B 9 309 309 HOH HOH . I 4 HOH B 10 310 310 HOH HOH . I 4 HOH B 11 311 311 HOH HOH . I 4 HOH B 12 312 312 HOH HOH . I 4 HOH B 13 313 313 HOH HOH . I 4 HOH B 14 314 314 HOH HOH . I 4 HOH B 15 315 315 HOH HOH . I 4 HOH B 16 316 316 HOH HOH . I 4 HOH B 17 317 317 HOH HOH . I 4 HOH B 18 318 318 HOH HOH . I 4 HOH B 19 319 319 HOH HOH . I 4 HOH B 20 320 320 HOH HOH . I 4 HOH B 21 321 321 HOH HOH . I 4 HOH B 22 322 322 HOH HOH . I 4 HOH B 23 323 323 HOH HOH . I 4 HOH B 24 324 324 HOH HOH . I 4 HOH B 25 325 325 HOH HOH . I 4 HOH B 26 326 326 HOH HOH . I 4 HOH B 27 327 327 HOH HOH . I 4 HOH B 28 328 328 HOH HOH . I 4 HOH B 29 329 329 HOH HOH . I 4 HOH B 30 330 330 HOH HOH . I 4 HOH B 31 331 331 HOH HOH . I 4 HOH B 32 332 332 HOH HOH . J 4 HOH E 1 201 201 HOH HOH . J 4 HOH E 2 202 202 HOH HOH . J 4 HOH E 3 203 203 HOH HOH . J 4 HOH E 4 204 204 HOH HOH . J 4 HOH E 5 205 205 HOH HOH . J 4 HOH E 6 206 206 HOH HOH . K 4 HOH D 1 201 201 HOH HOH . K 4 HOH D 2 202 202 HOH HOH . K 4 HOH D 3 203 203 HOH HOH . K 4 HOH D 4 204 204 HOH HOH . K 4 HOH D 5 205 205 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 3 _atom_site.Cartn_x -27.264 _atom_site.Cartn_y -36.349 _atom_site.Cartn_z -18.672 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 64.15 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 201 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #