data_6U63 # _model_server_result.job_id b2QDrwD4_hG_qYtrb5BlWQ _model_server_result.datetime_utc '2024-11-16 23:51:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6u63 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":500}' # _entry.id 6U63 # _exptl.entry_id 6U63 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 463.569 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-{[(naphthalen-2-yl)sulfonyl]amino}-5-[(2-phenylethyl)sulfanyl]benzoic acid' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6U63 _cell.length_a 68.98 _cell.length_b 69.6 _cell.length_c 110.34 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6U63 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,K 1 1 B,G,H,L 2 1 C,I,M 3 1 D,J,N 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N # _chem_comp.formula 'C25 H21 N O4 S2' _chem_comp.formula_weight 463.569 _chem_comp.id Q0D _chem_comp.mon_nstd_flag . _chem_comp.name '2-{[(naphthalen-2-yl)sulfonyl]amino}-5-[(2-phenylethyl)sulfanyl]benzoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O2 S1 Q0D doub 277 n n C19 C20 Q0D doub 278 n y C19 C18 Q0D sing 279 n y C20 C21 Q0D sing 280 n y C18 C17 Q0D doub 281 n y C18 C23 Q0D sing 282 n y C17 C16 Q0D sing 283 n y C21 C22 Q0D doub 284 n y C23 C22 Q0D sing 285 n y C23 C24 Q0D doub 286 n y C16 C15 Q0D doub 287 n y C15 C24 Q0D sing 288 n y C15 S1 Q0D sing 289 n n O3 S1 Q0D doub 290 n n S1 N Q0D sing 291 n n N C14 Q0D sing 292 n n C8 C9 Q0D doub 293 n y C8 C7 Q0D sing 294 n y O1 C Q0D doub 295 n n C14 C1 Q0D doub 296 n y C14 C13 Q0D sing 297 n y C9 C10 Q0D sing 298 n y C O Q0D sing 299 n n C C1 Q0D sing 300 n n C7 C6 Q0D doub 301 n y C1 C2 Q0D sing 302 n y C13 C12 Q0D doub 303 n y C10 C11 Q0D doub 304 n y C6 C11 Q0D sing 305 n y C6 C5 Q0D sing 306 n n C2 C3 Q0D doub 307 n y C12 C3 Q0D sing 308 n y C3 S Q0D sing 309 n n C5 C4 Q0D sing 310 n n C4 S Q0D sing 311 n n C2 H1 Q0D sing 312 n n C4 H2 Q0D sing 313 n n C4 H3 Q0D sing 314 n n C5 H4 Q0D sing 315 n n C5 H5 Q0D sing 316 n n C19 H6 Q0D sing 317 n n C24 H7 Q0D sing 318 n n C22 H8 Q0D sing 319 n n C21 H9 Q0D sing 320 n n C20 H10 Q0D sing 321 n n C17 H11 Q0D sing 322 n n C16 H12 Q0D sing 323 n n N H13 Q0D sing 324 n n O H14 Q0D sing 325 n n C13 H15 Q0D sing 326 n n C12 H16 Q0D sing 327 n n C11 H17 Q0D sing 328 n n C10 H18 Q0D sing 329 n n C9 H19 Q0D sing 330 n n C8 H20 Q0D sing 331 n n C7 H21 Q0D sing 332 n n # _atom_sites.entry_id 6U63 _atom_sites.fract_transf_matrix[1][1] 0.014497 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014368 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009063 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 Q0D A 1 401 500 Q0D 382 . F 2 Q0D A 1 402 1 Q0D 382 . G 2 Q0D B 1 401 500 Q0D 382 . H 2 Q0D B 1 402 2 Q0D 382 . I 2 Q0D C 1 500 500 Q0D 382 . J 2 Q0D D 1 500 500 Q0D 382 . K 3 HOH A 1 501 11 HOH HOH . K 3 HOH A 2 502 9 HOH HOH . K 3 HOH A 3 503 1 HOH HOH . K 3 HOH A 4 504 17 HOH HOH . K 3 HOH A 5 505 8 HOH HOH . K 3 HOH A 6 506 10 HOH HOH . K 3 HOH A 7 507 22 HOH HOH . L 3 HOH B 1 501 2 HOH HOH . L 3 HOH B 2 502 20 HOH HOH . L 3 HOH B 3 503 15 HOH HOH . L 3 HOH B 4 504 13 HOH HOH . L 3 HOH B 5 505 21 HOH HOH . L 3 HOH B 6 506 5 HOH HOH . L 3 HOH B 7 507 14 HOH HOH . L 3 HOH B 8 508 12 HOH HOH . M 3 HOH C 1 601 18 HOH HOH . M 3 HOH C 2 602 3 HOH HOH . M 3 HOH C 3 603 6 HOH HOH . M 3 HOH C 4 604 7 HOH HOH . M 3 HOH C 5 605 24 HOH HOH . M 3 HOH C 6 606 16 HOH HOH . N 3 HOH D 1 601 19 HOH HOH . N 3 HOH D 2 602 4 HOH HOH . N 3 HOH D 3 603 23 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 Q0D . . . I 2 62.745 51.613 99.517 1 46.25 ? C1 Q0D 500 C 1 HETATM 2 C C2 Q0D . . . I 2 62.449 52.983 99.576 1 45.49 ? C2 Q0D 500 C 1 HETATM 3 C C4 Q0D . . . I 2 59.36 55.207 100.64 1 42.62 ? C4 Q0D 500 C 1 HETATM 4 C C5 Q0D . . . I 2 59.961 54.779 101.972 1 42.05 ? C5 Q0D 500 C 1 HETATM 5 C C6 Q0D . . . I 2 59.163 55.124 103.21 1 41.51 ? C6 Q0D 500 C 1 HETATM 6 C C15 Q0D . . . I 2 62.98 49.311 102.086 1 40.95 ? C15 Q0D 500 C 1 HETATM 7 C C19 Q0D . . . I 2 63.866 51.549 105.535 1 35.72 ? C19 Q0D 500 C 1 HETATM 8 C C23 Q0D . . . I 2 62.235 50.622 103.971 1 36.84 ? C23 Q0D 500 C 1 HETATM 9 C C24 Q0D . . . I 2 61.953 49.87 102.805 1 37.84 ? C24 Q0D 500 C 1 HETATM 10 O O3 Q0D . . . I 2 63.816 47.894 100.078 1 47.72 ? O3 Q0D 500 C 1 HETATM 11 S S1 Q0D . . . I 2 62.592 48.347 100.664 1 45.34 ? S1 Q0D 500 C 1 HETATM 12 O O2 Q0D . . . I 2 61.592 47.393 101.032 1 45.21 ? O2 Q0D 500 C 1 HETATM 13 C C22 Q0D . . . I 2 61.218 51.228 104.75 1 36.96 ? C22 Q0D 500 C 1 HETATM 14 C C21 Q0D . . . I 2 61.531 51.96 105.862 1 36.09 ? C21 Q0D 500 C 1 HETATM 15 C C20 Q0D . . . I 2 62.854 52.121 106.253 1 35.58 ? C20 Q0D 500 C 1 HETATM 16 C C18 Q0D . . . I 2 63.59 50.785 104.373 1 36.68 ? C18 Q0D 500 C 1 HETATM 17 C C17 Q0D . . . I 2 64.609 50.189 103.588 1 37.26 ? C17 Q0D 500 C 1 HETATM 18 C C16 Q0D . . . I 2 64.308 49.467 102.471 1 38.56 ? C16 Q0D 500 C 1 HETATM 19 N N Q0D . . . I 2 61.809 49.321 99.616 1 45.37 ? N Q0D 500 C 1 HETATM 20 C C14 Q0D . . . I 2 61.699 50.696 99.268 1 45.41 ? C14 Q0D 500 C 1 HETATM 21 C C Q0D . . . I 2 64.186 51.204 99.509 1 47.93 ? C Q0D 500 C 1 HETATM 22 O O1 Q0D . . . I 2 64.444 50.086 98.9 1 48.78 ? O1 Q0D 500 C 1 HETATM 23 O O Q0D . . . I 2 65.059 51.9 100.015 1 48.63 ? O Q0D 500 C 1 HETATM 24 C C13 Q0D . . . I 2 60.424 51.179 98.994 1 45.08 ? C13 Q0D 500 C 1 HETATM 25 C C12 Q0D . . . I 2 60.149 52.532 99.049 1 44.93 ? C12 Q0D 500 C 1 HETATM 26 C C3 Q0D . . . I 2 61.153 53.436 99.35 1 45 ? C3 Q0D 500 C 1 HETATM 27 S S Q0D . . . I 2 60.702 55.146 99.42 1 44.35 ? S Q0D 500 C 1 HETATM 28 C C11 Q0D . . . I 2 57.858 55.599 103.119 1 41.91 ? C11 Q0D 500 C 1 HETATM 29 C C10 Q0D . . . I 2 57.139 55.927 104.258 1 41.91 ? C10 Q0D 500 C 1 HETATM 30 C C9 Q0D . . . I 2 57.714 55.785 105.507 1 41.3 ? C9 Q0D 500 C 1 HETATM 31 C C8 Q0D . . . I 2 59.007 55.305 105.612 1 41.03 ? C8 Q0D 500 C 1 HETATM 32 C C7 Q0D . . . I 2 59.725 54.978 104.472 1 40.67 ? C7 Q0D 500 C 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 32 #