data_6U6F # _model_server_result.job_id uJymtNTKXtnm6fW5wwx-qg _model_server_result.datetime_utc '2024-11-22 12:12:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6u6f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 6U6F # _exptl.entry_id 6U6F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 567.762 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-[({4-[(4-tert-butylphenyl)methyl]piperazin-1-yl}sulfonyl)amino]-5-[(2-phenylethyl)sulfanyl]benzoic acid' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6U6F _cell.length_a 68.45 _cell.length_b 68.45 _cell.length_c 363.65 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6U6F _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,H 1 1 B,F,I 2 1 C,G,J 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N # _chem_comp.formula 'C30 H37 N3 O4 S2' _chem_comp.formula_weight 567.762 _chem_comp.id PZY _chem_comp.mon_nstd_flag . _chem_comp.name '2-[({4-[(4-tert-butylphenyl)methyl]piperazin-1-yl}sulfonyl)amino]-5-[(2-phenylethyl)sulfanyl]benzoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C28 C27 PZY sing 277 n n C30 C27 PZY sing 278 n n C27 C29 PZY sing 279 n n C27 C24 PZY sing 280 n n C23 C24 PZY doub 281 n y C23 C22 PZY sing 282 n y O4 S2 PZY doub 283 n n C24 C25 PZY sing 284 n y C19 N2 PZY sing 285 n n C19 C18 PZY sing 286 n n O3 S2 PZY doub 287 n n C22 C21 PZY doub 288 n y S2 N2 PZY sing 289 n n S2 N1 PZY sing 290 n n N2 C16 PZY sing 291 n n C18 N3 PZY sing 292 n n C25 C26 PZY doub 293 n y C21 C26 PZY sing 294 n y C21 C20 PZY sing 295 n n N3 C20 PZY sing 296 n n N3 C17 PZY sing 297 n n C16 C17 PZY sing 298 n n N1 C3 PZY sing 299 n n C4 C3 PZY doub 300 n y C4 C5 PZY sing 301 n y C3 C2 PZY sing 302 n y C5 C6 PZY doub 303 n y C13 C14 PZY doub 304 n y C13 C12 PZY sing 305 n y C14 C9 PZY sing 306 n y O2 C15 PZY doub 307 n n C2 C15 PZY sing 308 n n C2 C1 PZY doub 309 n y C15 O1 PZY sing 310 n n C12 C11 PZY doub 311 n y C9 C8 PZY sing 312 n n C9 C10 PZY doub 313 n y C6 C1 PZY sing 314 n y C6 S1 PZY sing 315 n n C8 C7 PZY sing 316 n n C11 C10 PZY sing 317 n y S1 C7 PZY sing 318 n n N1 H1 PZY sing 319 n n C4 H3 PZY sing 320 n n C5 H4 PZY sing 321 n n C7 H5 PZY sing 322 n n C7 H6 PZY sing 323 n n C8 H7 PZY sing 324 n n C8 H8 PZY sing 325 n n C10 H9 PZY sing 326 n n C13 H10 PZY sing 327 n n C17 H11 PZY sing 328 n n C17 H12 PZY sing 329 n n C20 H13 PZY sing 330 n n C20 H14 PZY sing 331 n n C22 H15 PZY sing 332 n n C26 H16 PZY sing 333 n n C28 H17 PZY sing 334 n n C28 H18 PZY sing 335 n n C28 H19 PZY sing 336 n n C1 H20 PZY sing 337 n n C11 H21 PZY sing 338 n n C12 H22 PZY sing 339 n n C14 H23 PZY sing 340 n n O1 H24 PZY sing 341 n n C16 H25 PZY sing 342 n n C16 H26 PZY sing 343 n n C18 H27 PZY sing 344 n n C18 H28 PZY sing 345 n n C19 H29 PZY sing 346 n n C19 H30 PZY sing 347 n n C23 H31 PZY sing 348 n n C25 H32 PZY sing 349 n n C29 H33 PZY sing 350 n n C29 H34 PZY sing 351 n n C29 H35 PZY sing 352 n n C30 H36 PZY sing 353 n n C30 H37 PZY sing 354 n n C30 H38 PZY sing 355 n n # _atom_sites.entry_id 6U6F _atom_sites.fract_transf_matrix[1][1] 0.014609 _atom_sites.fract_transf_matrix[1][2] 0.008435 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016869 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00275 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 PZY A 1 401 401 PZY LIG . E 2 PZY A 1 402 501 PZY LIG . F 2 PZY B 1 401 401 PZY LIG . G 2 PZY C 1 401 401 PZY LIG . H 3 HOH A 1 501 613 HOH HOH . H 3 HOH A 2 502 601 HOH HOH . H 3 HOH A 3 503 612 HOH HOH . H 3 HOH A 4 504 605 HOH HOH . H 3 HOH A 5 505 609 HOH HOH . H 3 HOH A 6 506 602 HOH HOH . H 3 HOH A 7 507 603 HOH HOH . H 3 HOH A 8 508 608 HOH HOH . H 3 HOH A 9 509 606 HOH HOH . H 3 HOH A 10 510 607 HOH HOH . H 3 HOH A 11 511 604 HOH HOH . H 3 HOH A 12 512 615 HOH HOH . H 3 HOH A 13 513 611 HOH HOH . H 3 HOH A 14 514 614 HOH HOH . H 3 HOH A 15 515 610 HOH HOH . I 3 HOH B 1 501 603 HOH HOH . I 3 HOH B 2 502 616 HOH HOH . I 3 HOH B 3 503 606 HOH HOH . I 3 HOH B 4 504 610 HOH HOH . I 3 HOH B 5 505 625 HOH HOH . I 3 HOH B 6 506 607 HOH HOH . I 3 HOH B 7 507 609 HOH HOH . I 3 HOH B 8 508 612 HOH HOH . I 3 HOH B 9 509 614 HOH HOH . I 3 HOH B 10 510 622 HOH HOH . I 3 HOH B 11 511 604 HOH HOH . I 3 HOH B 12 512 605 HOH HOH . I 3 HOH B 13 513 617 HOH HOH . I 3 HOH B 14 514 615 HOH HOH . I 3 HOH B 15 515 601 HOH HOH . I 3 HOH B 16 516 611 HOH HOH . I 3 HOH B 17 517 618 HOH HOH . I 3 HOH B 18 518 613 HOH HOH . I 3 HOH B 19 519 620 HOH HOH . I 3 HOH B 20 520 623 HOH HOH . I 3 HOH B 21 521 624 HOH HOH . I 3 HOH B 22 522 619 HOH HOH . I 3 HOH B 23 523 608 HOH HOH . I 3 HOH B 24 524 621 HOH HOH . I 3 HOH B 25 525 602 HOH HOH . J 3 HOH C 1 501 605 HOH HOH . J 3 HOH C 2 502 608 HOH HOH . J 3 HOH C 3 503 610 HOH HOH . J 3 HOH C 4 504 609 HOH HOH . J 3 HOH C 5 505 603 HOH HOH . J 3 HOH C 6 506 607 HOH HOH . J 3 HOH C 7 507 602 HOH HOH . J 3 HOH C 8 508 612 HOH HOH . J 3 HOH C 9 509 611 HOH HOH . J 3 HOH C 10 510 604 HOH HOH . J 3 HOH C 11 511 606 HOH HOH . J 3 HOH C 12 512 601 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 PZY . . . D 2 -29.683 17.484 15.883 1 38.25 ? N1 PZY 401 A 1 HETATM 2 N N3 PZY . . . D 2 -34.269 19.575 15.401 1 41.91 ? N3 PZY 401 A 1 HETATM 3 C C4 PZY . . . D 2 -31.258 15.845 16.657 1 37.59 ? C4 PZY 401 A 1 HETATM 4 C C5 PZY . . . D 2 -32.046 15.31 17.656 1 38.01 ? C5 PZY 401 A 1 HETATM 5 C C6 PZY . . . D 2 -32.057 15.877 18.927 1 38.11 ? C6 PZY 401 A 1 HETATM 6 C C7 PZY . . . D 2 -34.482 16.31 20.278 1 40.68 ? C7 PZY 401 A 1 HETATM 7 C C8 PZY . . . D 2 -35.239 16.484 18.973 1 42.05 ? C8 PZY 401 A 1 HETATM 8 C C10 PZY . . . D 2 -37.533 15.957 19.905 1 41.77 ? C10 PZY 401 A 1 HETATM 9 C C13 PZY . . . D 2 -38.147 14.368 17.732 1 42.36 ? C13 PZY 401 A 1 HETATM 10 C C15 PZY . . . D 2 -29.603 18.761 18.534 1 36.67 ? C15 PZY 401 A 1 HETATM 11 C C17 PZY . . . D 2 -33.13 19.834 16.27 1 41.02 ? C17 PZY 401 A 1 HETATM 12 C C20 PZY . . . D 2 -35.529 19.648 16.146 1 43.98 ? C20 PZY 401 A 1 HETATM 13 C C21 PZY . . . D 2 -36.702 20.115 15.317 1 46.19 ? C21 PZY 401 A 1 HETATM 14 C C22 PZY . . . D 2 -36.513 20.871 14.171 1 46.76 ? C22 PZY 401 A 1 HETATM 15 C C24 PZY . . . D 2 -38.909 21.009 13.792 1 47.28 ? C24 PZY 401 A 1 HETATM 16 C C26 PZY . . . D 2 -37.998 19.803 15.695 1 46.77 ? C26 PZY 401 A 1 HETATM 17 C C28 PZY . . . D 2 -40.214 20.653 11.663 1 46.11 ? C28 PZY 401 A 1 HETATM 18 C C1 PZY . . . D 2 -31.256 16.985 19.185 1 37.63 ? C1 PZY 401 A 1 HETATM 19 C C2 PZY . . . D 2 -30.455 17.552 18.184 1 36.98 ? C2 PZY 401 A 1 HETATM 20 C C3 PZY . . . D 2 -30.461 16.959 16.905 1 37.27 ? C3 PZY 401 A 1 HETATM 21 S S1 PZY . . . D 2 -33.076 15.17 20.173 1 38.22 ? S1 PZY 401 A 1 HETATM 22 C C9 PZY . . . D 2 -36.582 15.786 18.906 1 41.94 ? C9 PZY 401 A 1 HETATM 23 C C11 PZY . . . D 2 -38.765 15.321 19.83 1 42.11 ? C11 PZY 401 A 1 HETATM 24 C C12 PZY . . . D 2 -39.07 14.528 18.743 1 42.46 ? C12 PZY 401 A 1 HETATM 25 C C14 PZY . . . D 2 -36.911 14.996 17.811 1 42.18 ? C14 PZY 401 A 1 HETATM 26 O O1 PZY . . . D 2 -30 19.508 19.45 1 36.46 -1 O1 PZY 401 A 1 HETATM 27 O O2 PZY . . . D 2 -28.538 18.932 17.914 1 36.51 ? O2 PZY 401 A 1 HETATM 28 S S2 PZY . . . D 2 -30.252 17.968 14.432 1 38.68 ? S2 PZY 401 A 1 HETATM 29 O O3 PZY . . . D 2 -29.389 18.997 13.975 1 38.1 ? O3 PZY 401 A 1 HETATM 30 O O4 PZY . . . D 2 -30.452 16.808 13.64 1 37.94 ? O4 PZY 401 A 1 HETATM 31 N N2 PZY . . . D 2 -31.72 18.639 14.695 1 39.64 ? N2 PZY 401 A 1 HETATM 32 C C16 PZY . . . D 2 -31.852 19.886 15.456 1 40.14 ? C16 PZY 401 A 1 HETATM 33 C C18 PZY . . . D 2 -34.113 18.289 14.736 1 40.66 ? C18 PZY 401 A 1 HETATM 34 C C19 PZY . . . D 2 -32.878 18.307 13.86 1 39.93 ? C19 PZY 401 A 1 HETATM 35 C C23 PZY . . . D 2 -37.597 21.289 13.416 1 47.13 ? C23 PZY 401 A 1 HETATM 36 C C25 PZY . . . D 2 -39.076 20.237 14.94 1 47.22 ? C25 PZY 401 A 1 HETATM 37 C C27 PZY . . . D 2 -40.106 21.48 12.949 1 46.9 ? C27 PZY 401 A 1 HETATM 38 C C29 PZY . . . D 2 -41.426 21.334 13.716 1 47.42 ? C29 PZY 401 A 1 HETATM 39 C C30 PZY . . . D 2 -39.957 22.956 12.564 1 46.58 ? C30 PZY 401 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 39 #