data_6U6X # _model_server_result.job_id pTXXeJljg50DAKFpUEZNfA _model_server_result.datetime_utc '2025-07-05 13:17:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6u6x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":701}' # _entry.id 6U6X # _exptl.entry_id 6U6X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 69.72 _cell.angle_beta 76.3 _cell.angle_gamma 82.77 _cell.entry_id 6U6X _cell.length_a 69.36 _cell.length_b 81.87 _cell.length_c 106 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6U6X _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall 'P 1' _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? tetrameric 4 author_defined_assembly 1 ? tetrameric 4 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,H,I,L,M,N 1 1 B,C,F,G,J,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 248 A CYS 341 1_555 A SG CYS 257 A CYS 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf2 D SG CYS 248 D CYS 341 1_555 D SG CYS 257 D CYS 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? covale ? covale1 E O3' SC 1 E SC 801 1_555 E P GS 2 E GS 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.599 ? covale ? covale2 E O3' GS 2 E GS 802 1_555 E P SC 3 E SC 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.609 ? covale ? covale3 E O3' SC 3 E SC 803 1_555 E P SC 4 E SC 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.615 ? covale ? covale4 F O3' SC 1 G SC 801 1_555 F P GS 2 G GS 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.605 ? covale ? covale5 F O3' GS 2 G GS 802 1_555 F P SC 3 G SC 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.607 ? covale ? covale6 F O3' SC 3 G SC 803 1_555 F P SC 4 G SC 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.61 ? covale ? covale7 G O3' SC 1 F SC 801 1_555 G P GS 2 F GS 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.608 ? covale ? covale8 G O3' GS 2 F GS 802 1_555 G P SC 3 F SC 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.611 ? covale ? covale9 G O3' SC 3 F SC 803 1_555 G P SC 4 F SC 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.61 ? covale ? covale10 H O3' SC 1 H SC 801 1_555 H P GS 2 H GS 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.6 ? covale ? covale11 H O3' GS 2 H GS 802 1_555 H P SC 3 H SC 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.613 ? covale ? covale12 H O3' SC 3 H SC 803 1_555 H P SC 4 H SC 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.612 ? metalc ? metalc1 A NE2 HIS 74 A HIS 167 1_555 I ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.498 ? metalc ? metalc2 A NE2 HIS 113 A HIS 206 1_555 I ZN ZN . A ZN 701 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.434 ? metalc ? metalc3 B NE2 HIS 74 B HIS 167 1_555 J ZN ZN . B ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.577 ? metalc ? metalc4 B OD2 ASP 114 B ASP 207 1_555 J ZN ZN . B ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.536 ? metalc ? metalc5 C OD2 ASP 114 C ASP 207 1_555 K ZN ZN . C ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.53 ? metalc ? metalc6 D NE2 HIS 74 D HIS 167 1_555 L ZN ZN . D ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.57 ? metalc ? metalc7 D NE2 HIS 113 D HIS 206 1_555 L ZN ZN . D ZN 701 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.415 ? metalc ? metalc8 D OD2 ASP 114 D ASP 207 1_555 L ZN ZN . D ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.638 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6U6X _atom_sites.fract_transf_matrix[1][1] 0.014418 _atom_sites.fract_transf_matrix[1][2] -0.001829 _atom_sites.fract_transf_matrix[1][3] -0.003085 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012312 _atom_sites.fract_transf_matrix[2][3] -0.004285 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010281 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 ZN A 1 701 701 ZN ZN . J 3 ZN B 1 701 701 ZN ZN . K 3 ZN C 1 701 701 ZN ZN . L 3 ZN D 1 701 701 ZN ZN . M 4 HOH A 1 801 7 HOH HOH . M 4 HOH A 2 802 14 HOH HOH . M 4 HOH A 3 803 3 HOH HOH . M 4 HOH A 4 804 8 HOH HOH . N 4 HOH D 1 801 2 HOH HOH . N 4 HOH D 2 802 12 HOH HOH . N 4 HOH D 3 803 1 HOH HOH . N 4 HOH D 4 804 16 HOH HOH . N 4 HOH D 5 805 17 HOH HOH . N 4 HOH D 6 806 15 HOH HOH . N 4 HOH D 7 807 11 HOH HOH . N 4 HOH D 8 808 5 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id K _atom_site.label_entity_id 3 _atom_site.Cartn_x 28.472 _atom_site.Cartn_y -29.643 _atom_site.Cartn_z 79.799 _atom_site.occupancy 0.97 _atom_site.B_iso_or_equiv 146.68 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 701 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 73 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 21 _model_server_stats.element_count 1 #