data_6U77
#
_model_server_result.job_id            PcbMjQG4bEjgeuyFzWeqZQ 
_model_server_result.datetime_utc      '2024-11-22 10:27:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6u77 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":901}' 
#
_entry.id    6U77 
#
_exptl.entry_id    6U77 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              260.136 
_entity.id                          2 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            6-O-phosphono-alpha-D-glucopyranose 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6U77 
_cell.length_a            192.257 
_cell.length_b            206.557 
_cell.length_c            205.035 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6U77 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 K N N 
#
_chem_comp.formula           'C6 H13 O9 P' 
_chem_comp.formula_weight    260.136 
_chem_comp.id                G6P 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              6-O-phosphono-alpha-D-glucopyranose 
_chem_comp.type              'd-saccharide, alpha linking' 
_chem_comp.pdbx_synonyms     ALPHA-D-GLUCOSE-6-PHOSPHATE;6-O-phosphono-alpha-D-glucose;6-O-phosphono-D-glucose;6-O-phosphono-glucose 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 G6P sing 83 n n 
C1 O1 G6P sing 84 n n 
C1 O5 G6P sing 85 n n 
C1 H1 G6P sing 86 n n 
C2 C3 G6P sing 87 n n 
C2 O2 G6P sing 88 n n 
C2 H2 G6P sing 89 n n 
C3 C4 G6P sing 90 n n 
C3 O3 G6P sing 91 n n 
C3 H3 G6P sing 92 n n 
C4 C5 G6P sing 93 n n 
C4 O4 G6P sing 94 n n 
C4 H4 G6P sing 95 n n 
C5 C6 G6P sing 96 n n 
C5 O5 G6P sing 97 n n 
C5 H5 G6P sing 98 n n 
C6 O6 G6P sing 99 n n 
C6 H61 G6P sing 100 n n 
C6 H62 G6P sing 101 n n 
O1 HO1 G6P sing 102 n n 
O2 HO2 G6P sing 103 n n 
O3 HO3 G6P sing 104 n n 
O4 HO4 G6P sing 105 n n 
O6 P G6P sing 106 n n 
P O1P G6P sing 107 n n 
P O2P G6P sing 108 n n 
P O3P G6P doub 109 n n 
O1P HO1P G6P sing 110 n n 
O2P HO2P G6P sing 111 n n 
#
_pdbx_chem_comp_identifier.comp_id            G6P 
_pdbx_chem_comp_identifier.identifier         a-D-Glcp6PO3 
_pdbx_chem_comp_identifier.type               'IUPAC CARBOHYDRATE SYMBOL' 
_pdbx_chem_comp_identifier.program            PDB-CARE 
_pdbx_chem_comp_identifier.program_version    1 
#
_atom_sites.entry_id                     6U77 
_atom_sites.fract_transf_matrix[1][1]    0.005201 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.004841 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004877 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 G6P A 1 901 901 G6P G6P . 
F 3 VMC A 1 902 1 VMC VMC . 
G 2 G6P B 1 901 901 G6P G6P . 
H 2 G6P B 1 902 1 G6P G6P . 
I 2 G6P C 1 901 901 G6P G6P . 
J 3 VMC C 1 902 2 VMC VMC . 
K 2 G6P D 1 901 901 G6P G6P . 
L 3 VMC D 1 902 3 VMC VMC . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 G6P . . . I 2 -46.005 18.525 -62.239 1 65.41 ? C1 G6P 901 C 1 
HETATM 2 C C2 G6P . . . I 2 -44.767 17.745 -61.803 1 65.62 ? C2 G6P 901 C 1 
HETATM 3 C C3 G6P . . . I 2 -43.884 17.449 -63.012 1 66.34 ? C3 G6P 901 C 1 
HETATM 4 C C4 G6P . . . I 2 -44.74 16.784 -64.092 1 65.67 ? C4 G6P 901 C 1 
HETATM 5 C C5 G6P . . . I 2 -45.867 17.738 -64.465 1 65.93 ? C5 G6P 901 C 1 
HETATM 6 C C6 G6P . . . I 2 -46.758 17.269 -65.6 1 66.55 ? C6 G6P 901 C 1 
HETATM 7 O O1 G6P . . . I 2 -45.622 19.821 -62.677 1 64 ? O1 G6P 901 C 1 
HETATM 8 O O2 G6P . . . I 2 -44.061 18.515 -60.82 1 65.21 ? O2 G6P 901 C 1 
HETATM 9 O O3 G6P . . . I 2 -42.757 16.668 -62.598 1 63.46 ? O3 G6P 901 C 1 
HETATM 10 O O4 G6P . . . I 2 -43.972 16.495 -65.255 1 69.24 ? O4 G6P 901 C 1 
HETATM 11 O O5 G6P . . . I 2 -46.692 17.902 -63.32 1 65.82 ? O5 G6P 901 C 1 
HETATM 12 O O6 G6P . . . I 2 -47.882 18.134 -65.737 1 64.81 ? O6 G6P 901 C 1 
HETATM 13 P P G6P . . . I 2 -49.105 17.676 -66.674 1 66.23 ? P G6P 901 C 1 
HETATM 14 O O1P G6P . . . I 2 -49.965 16.894 -65.725 1 66.98 ? O1P G6P 901 C 1 
HETATM 15 O O2P G6P . . . I 2 -49.776 18.967 -67.033 1 63.92 ? O2P G6P 901 C 1 
HETATM 16 O O3P G6P . . . I 2 -48.504 16.885 -67.821 1 61.23 ? O3P G6P 901 C 1 
#
_model_server_stats.io_time_ms              43 
_model_server_stats.parse_time_ms           18 
_model_server_stats.create_model_time_ms    27 
_model_server_stats.query_time_ms           287 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           16 
#