data_6U77
#
_model_server_result.job_id            Bp92cXo7912j6E8EN6rmhQ 
_model_server_result.datetime_utc      '2024-11-22 10:04:39' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6u77 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":902}' 
#
_entry.id    6U77 
#
_exptl.entry_id    6U77 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              377.479 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-methoxy-4-(1-{2-[(2S)-1-methylpyrrolidin-2-yl]ethyl}-4-phenyl-1H-imidazol-5-yl)phenol 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6U77 
_cell.length_a            192.257 
_cell.length_b            206.557 
_cell.length_c            205.035 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6U77 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 J N N 
? 3 L N N 
#
_chem_comp.formula           'C23 H27 N3 O2' 
_chem_comp.formula_weight    377.479 
_chem_comp.id                VMC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-methoxy-4-(1-{2-[(2S)-1-methylpyrrolidin-2-yl]ethyl}-4-phenyl-1H-imidazol-5-yl)phenol 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O26 C22 VMC sing 403 n n 
C21 C22 VMC doub 404 n y 
C21 C20 VMC sing 405 n y 
C22 C23 VMC sing 406 n y 
C20 C19 VMC doub 407 n y 
C28 O27 VMC sing 408 n n 
C23 O27 VMC sing 409 n n 
C23 C24 VMC doub 410 n y 
C19 C24 VMC sing 411 n y 
C19 C9 VMC sing 412 n n 
C7 C6 VMC sing 413 n n 
C7 N8 VMC sing 414 n n 
C6 C3 VMC sing 415 n n 
C9 N8 VMC sing 416 n y 
C9 C10 VMC doub 417 n y 
N8 C12 VMC sing 418 n y 
C25 N2 VMC sing 419 n n 
C18 C17 VMC doub 420 n y 
C18 C13 VMC sing 421 n y 
C3 N2 VMC sing 422 n n 
C3 C4 VMC sing 423 n n 
N2 C1 VMC sing 424 n n 
C12 N11 VMC doub 425 n y 
C10 C13 VMC sing 426 n n 
C10 N11 VMC sing 427 n y 
C17 C16 VMC sing 428 n y 
C13 C14 VMC doub 429 n y 
C4 C5 VMC sing 430 n n 
C1 C5 VMC sing 431 n n 
C16 C15 VMC doub 432 n y 
C14 C15 VMC sing 433 n y 
O26 H1 VMC sing 434 n n 
C21 H2 VMC sing 435 n n 
C20 H3 VMC sing 436 n n 
C28 H4 VMC sing 437 n n 
C28 H5 VMC sing 438 n n 
C28 H6 VMC sing 439 n n 
C24 H7 VMC sing 440 n n 
C18 H8 VMC sing 441 n n 
C17 H9 VMC sing 442 n n 
C16 H10 VMC sing 443 n n 
C15 H11 VMC sing 444 n n 
C14 H12 VMC sing 445 n n 
C12 H13 VMC sing 446 n n 
C7 H14 VMC sing 447 n n 
C7 H15 VMC sing 448 n n 
C6 H16 VMC sing 449 n n 
C6 H17 VMC sing 450 n n 
C3 H18 VMC sing 451 n n 
C25 H20 VMC sing 452 n n 
C25 H21 VMC sing 453 n n 
C25 H22 VMC sing 454 n n 
C4 H23 VMC sing 455 n n 
C4 H24 VMC sing 456 n n 
C5 H25 VMC sing 457 n n 
C5 H26 VMC sing 458 n n 
C1 H27 VMC sing 459 n n 
C1 H28 VMC sing 460 n n 
#
_atom_sites.entry_id                     6U77 
_atom_sites.fract_transf_matrix[1][1]    0.005201 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.004841 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004877 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 G6P A 1 901 901 G6P G6P . 
F 3 VMC A 1 902 1 VMC VMC . 
G 2 G6P B 1 901 901 G6P G6P . 
H 2 G6P B 1 902 1 G6P G6P . 
I 2 G6P C 1 901 901 G6P G6P . 
J 3 VMC C 1 902 2 VMC VMC . 
K 2 G6P D 1 901 901 G6P G6P . 
L 3 VMC D 1 902 3 VMC VMC . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O26 VMC . . . L 3 -15.715 13.038 -56.663 1 102.02 ? O26 VMC 902 D 1 
HETATM 2 C C22 VMC . . . L 3 -15.063 14.027 -57.349 1 110.73 ? C22 VMC 902 D 1 
HETATM 3 C C21 VMC . . . L 3 -14.553 15.117 -56.639 1 108.99 ? C21 VMC 902 D 1 
HETATM 4 C C20 VMC . . . L 3 -13.878 16.142 -57.303 1 109.91 ? C20 VMC 902 D 1 
HETATM 5 C C23 VMC . . . L 3 -14.891 13.967 -58.74 1 115.98 ? C23 VMC 902 D 1 
HETATM 6 O O27 VMC . . . L 3 -15.378 12.889 -59.452 1 120.58 ? O27 VMC 902 D 1 
HETATM 7 C C28 VMC . . . L 3 -16.705 12.867 -59.993 1 120.76 ? C28 VMC 902 D 1 
HETATM 8 C C24 VMC . . . L 3 -14.206 14.999 -59.406 1 113.41 ? C24 VMC 902 D 1 
HETATM 9 C C19 VMC . . . L 3 -13.693 16.085 -58.686 1 109.29 ? C19 VMC 902 D 1 
HETATM 10 C C9 VMC . . . L 3 -12.988 17.216 -59.359 1 106.36 ? C9 VMC 902 D 1 
HETATM 11 C C10 VMC . . . L 3 -11.612 17.299 -59.921 1 110.7 ? C10 VMC 902 D 1 
HETATM 12 C C13 VMC . . . L 3 -10.527 16.276 -59.99 1 117.79 ? C13 VMC 902 D 1 
HETATM 13 C C18 VMC . . . L 3 -10.115 15.563 -58.859 1 122.34 ? C18 VMC 902 D 1 
HETATM 14 C C17 VMC . . . L 3 -9.078 14.623 -58.967 1 124.5 ? C17 VMC 902 D 1 
HETATM 15 C C16 VMC . . . L 3 -8.449 14.4 -60.198 1 122.22 ? C16 VMC 902 D 1 
HETATM 16 C C15 VMC . . . L 3 -8.86 15.118 -61.325 1 122.12 ? C15 VMC 902 D 1 
HETATM 17 C C14 VMC . . . L 3 -9.893 16.054 -61.219 1 118.65 ? C14 VMC 902 D 1 
HETATM 18 N N11 VMC . . . L 3 -11.493 18.554 -60.401 1 103.56 ? N11 VMC 902 D 1 
HETATM 19 C C12 VMC . . . L 3 -12.646 19.217 -60.182 1 102.43 ? C12 VMC 902 D 1 
HETATM 20 N N8 VMC . . . L 3 -13.536 18.423 -59.561 1 103.41 ? N8 VMC 902 D 1 
HETATM 21 C C7 VMC . . . L 3 -14.896 18.827 -59.181 1 101.56 ? C7 VMC 902 D 1 
HETATM 22 C C6 VMC . . . L 3 -15.995 18.298 -60.114 1 104.68 ? C6 VMC 902 D 1 
HETATM 23 C C3 VMC . . . L 3 -15.635 18.136 -61.602 1 106.86 ? C3 VMC 902 D 1 
HETATM 24 N N2 VMC . . . L 3 -16.727 17.49 -62.373 1 107.45 ? N2 VMC 902 D 1 
HETATM 25 C C25 VMC . . . L 3 -16.79 16.015 -62.228 1 104.99 ? C25 VMC 902 D 1 
HETATM 26 C C4 VMC . . . L 3 -15.401 19.47 -62.302 1 106.26 ? C4 VMC 902 D 1 
HETATM 27 C C5 VMC . . . L 3 -15.931 19.304 -63.721 1 108.85 ? C5 VMC 902 D 1 
HETATM 28 C C1 VMC . . . L 3 -16.57 17.923 -63.78 1 109.62 ? C1 VMC 902 D 1 
#
_model_server_stats.io_time_ms              46 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    25 
_model_server_stats.query_time_ms           281 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           28 
#