data_6U83 # _model_server_result.job_id RcUC7tM4GPs-uVT6w0K_uw _model_server_result.datetime_utc '2024-12-26 13:44:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6u83 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 6U83 # _exptl.entry_id 6U83 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6U83 _cell.length_a 113.788 _cell.length_b 134.971 _cell.length_c 31.206 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6U83 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 35 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 254 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 48 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 267 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.062 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 132 n n N1 C6 EPE sing 133 n n N1 C9 EPE sing 134 n n C2 C3 EPE sing 135 n n C2 H21 EPE sing 136 n n C2 H22 EPE sing 137 n n C3 N4 EPE sing 138 n n C3 H31 EPE sing 139 n n C3 H32 EPE sing 140 n n N4 C5 EPE sing 141 n n N4 C7 EPE sing 142 n n C5 C6 EPE sing 143 n n C5 H51 EPE sing 144 n n C5 H52 EPE sing 145 n n C6 H61 EPE sing 146 n n C6 H62 EPE sing 147 n n C7 C8 EPE sing 148 n n C7 H71 EPE sing 149 n n C7 H72 EPE sing 150 n n C8 O8 EPE sing 151 n n C8 H81 EPE sing 152 n n C8 H82 EPE sing 153 n n O8 HO8 EPE sing 154 n n C9 C10 EPE sing 155 n n C9 H91 EPE sing 156 n n C9 H92 EPE sing 157 n n C10 S EPE sing 158 n n C10 H101 EPE sing 159 n n C10 H102 EPE sing 160 n n S O1S EPE doub 161 n n S O2S EPE doub 162 n n S O3S EPE sing 163 n n O3S HOS3 EPE sing 164 n n # _atom_sites.entry_id 6U83 _atom_sites.fract_transf_matrix[1][1] 0.008788 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007409 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.032045 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EPE A 1 401 1 EPE EPE . C 3 1PE A 1 402 1 1PE 1PE . D 4 DAL A 1 403 1 DAL DAL . E 5 HOH A 1 501 7 HOH HOH . E 5 HOH A 2 502 10 HOH HOH . E 5 HOH A 3 503 9 HOH HOH . E 5 HOH A 4 504 5 HOH HOH . E 5 HOH A 5 505 4 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . B 2 -31.489 -36.151 -1.284 1 79.01 ? N1 EPE 401 A 1 HETATM 2 C C2 EPE . . . B 2 -30.412 -36.05 -2.268 1 76.74 ? C2 EPE 401 A 1 HETATM 3 C C3 EPE . . . B 2 -29.618 -37.349 -2.217 1 76.08 ? C3 EPE 401 A 1 HETATM 4 N N4 EPE . . . B 2 -29.103 -37.613 -0.896 1 83.28 ? N4 EPE 401 A 1 HETATM 5 C C5 EPE . . . B 2 -29.948 -37.287 0.25 1 85.91 ? C5 EPE 401 A 1 HETATM 6 C C6 EPE . . . B 2 -30.871 -36.083 0.049 1 85.26 ? C6 EPE 401 A 1 HETATM 7 C C7 EPE . . . B 2 -28.155 -38.711 -0.764 1 92.22 ? C7 EPE 401 A 1 HETATM 8 C C8 EPE . . . B 2 -26.734 -38.283 -0.388 1 98.75 ? C8 EPE 401 A 1 HETATM 9 O O8 EPE . . . B 2 -26.694 -37.674 0.893 1 94.67 ? O8 EPE 401 A 1 HETATM 10 C C9 EPE . . . B 2 -32.511 -35.107 -1.51 1 74.05 ? C9 EPE 401 A 1 HETATM 11 C C10 EPE . . . B 2 -32.077 -33.716 -1.043 1 76.16 ? C10 EPE 401 A 1 HETATM 12 S S EPE . . . B 2 -33.114 -32.43 -1.799 1 79.03 ? S EPE 401 A 1 HETATM 13 O O1S EPE . . . B 2 -32.985 -32.594 -3.244 1 85.83 ? O1S EPE 401 A 1 HETATM 14 O O2S EPE . . . B 2 -32.65 -31.081 -1.452 1 77.65 ? O2S EPE 401 A 1 HETATM 15 O O3S EPE . . . B 2 -34.518 -32.576 -1.392 1 63.04 ? O3S EPE 401 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 15 #