data_6U88 # _model_server_result.job_id zvvEMWv6igL0FX5tPtUrDQ _model_server_result.datetime_utc '2024-11-04 22:37:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6u88 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1001}' # _entry.id 6U88 # _exptl.entry_id 6U88 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 314.462 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description cannabidiol _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6U88 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6U88 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C21 H30 O2' _chem_comp.formula_weight 314.462 _chem_comp.id P0T _chem_comp.mon_nstd_flag . _chem_comp.name cannabidiol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms "(1'R,2'R)-5'-methyl-4-pentyl-2'-(prop-1-en-2-yl)-1',2',3',4'-tetrahydro[1,1'-biphenyl]-2,6-diol" # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C13 C09 P0T sing 235 n n C23 C22 P0T sing 236 n n C22 C21 P0T sing 237 n n C09 C06 P0T sing 238 n n C09 C07 P0T doub 239 n n O01 C11 P0T sing 240 n n C06 C05 P0T sing 241 n n C07 C04 P0T sing 242 n n C21 C20 P0T sing 243 n n C20 C18 P0T sing 244 n n C16 C11 P0T doub 245 n y C16 C15 P0T sing 246 n y C11 C08 P0T sing 247 n y C18 C15 P0T sing 248 n n C15 C17 P0T doub 249 n y C08 C04 P0T sing 250 n n C08 C12 P0T doub 251 n y C04 C03 P0T sing 252 n n C17 C12 P0T sing 253 n y C05 C03 P0T sing 254 n n C12 O02 P0T sing 255 n n C03 C10 P0T sing 256 n n C10 C19 P0T doub 257 n n C10 C14 P0T sing 258 n n C13 H1 P0T sing 259 n n C13 H2 P0T sing 260 n n C13 H3 P0T sing 261 n n C14 H4 P0T sing 262 n n C14 H5 P0T sing 263 n n C14 H6 P0T sing 264 n n C03 H7 P0T sing 265 n n C04 H8 P0T sing 266 n n C05 H9 P0T sing 267 n n C05 H10 P0T sing 268 n n C06 H11 P0T sing 269 n n C06 H12 P0T sing 270 n n C07 H13 P0T sing 271 n n C16 H16 P0T sing 272 n n C17 H17 P0T sing 273 n n C18 H18 P0T sing 274 n n C18 H19 P0T sing 275 n n C19 H20 P0T sing 276 n n C19 H21 P0T sing 277 n n C20 H22 P0T sing 278 n n C20 H23 P0T sing 279 n n C21 H24 P0T sing 280 n n C21 H25 P0T sing 281 n n C22 H26 P0T sing 282 n n C22 H27 P0T sing 283 n n C23 H28 P0T sing 284 n n C23 H29 P0T sing 285 n n C23 H30 P0T sing 286 n n O01 H31 P0T sing 287 n n O02 H32 P0T sing 288 n n # _atom_sites.entry_id 6U88 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 P0T A 1 1001 1001 P0T CBD . F 2 P0T B 1 1001 1001 P0T CBD . G 2 P0T C 1 1001 1001 P0T CBD . H 2 P0T D 1 1001 1001 P0T CBD . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 P0T . . . E 2 162.974 160.376 175.405 1 57.18 ? C10 P0T 1001 A 1 HETATM 2 C C11 P0T . . . E 2 166.236 158.632 173.334 1 57.18 ? C11 P0T 1001 A 1 HETATM 3 C C12 P0T . . . E 2 165.68 160.77 172.421 1 57.18 ? C12 P0T 1001 A 1 HETATM 4 C C13 P0T . . . E 2 162.641 159.552 170.25 1 57.18 ? C13 P0T 1001 A 1 HETATM 5 C C14 P0T . . . E 2 163.765 161.645 175.766 1 57.18 ? C14 P0T 1001 A 1 HETATM 6 C C03 P0T . . . E 2 162.754 160.076 173.927 1 57.18 ? C03 P0T 1001 A 1 HETATM 7 C C04 P0T . . . E 2 163.813 159.08 173.391 1 57.18 ? C04 P0T 1001 A 1 HETATM 8 C C05 P0T . . . E 2 161.334 159.513 173.76 1 57.18 ? C05 P0T 1001 A 1 HETATM 9 C C06 P0T . . . E 2 161.033 159.141 172.293 1 57.18 ? C06 P0T 1001 A 1 HETATM 10 C C07 P0T . . . E 2 163.321 158.299 172.163 1 57.18 ? C07 P0T 1001 A 1 HETATM 11 C C08 P0T . . . E 2 165.256 159.569 173.03 1 57.18 ? C08 P0T 1001 A 1 HETATM 12 C C09 P0T . . . E 2 162.278 158.728 171.495 1 57.18 ? C09 P0T 1001 A 1 HETATM 13 C C15 P0T . . . E 2 167.997 160.036 172.498 1 57.18 ? C15 P0T 1001 A 1 HETATM 14 C C16 P0T . . . E 2 167.586 158.855 173.091 1 57.18 ? C16 P0T 1001 A 1 HETATM 15 C C17 P0T . . . E 2 167.039 160.993 172.169 1 57.18 ? C17 P0T 1001 A 1 HETATM 16 C C18 P0T . . . E 2 169.51 160.259 172.233 1 57.18 ? C18 P0T 1001 A 1 HETATM 17 C C19 P0T . . . E 2 162.489 159.578 176.353 1 57.18 ? C19 P0T 1001 A 1 HETATM 18 C C20 P0T . . . E 2 170.13 158.951 171.666 1 57.18 ? C20 P0T 1001 A 1 HETATM 19 C C21 P0T . . . E 2 171.159 158.381 172.682 1 57.18 ? C21 P0T 1001 A 1 HETATM 20 C C22 P0T . . . E 2 172.012 157.272 172.017 1 57.18 ? C22 P0T 1001 A 1 HETATM 21 C C23 P0T . . . E 2 173.116 157.923 171.147 1 57.18 ? C23 P0T 1001 A 1 HETATM 22 O O01 P0T . . . E 2 165.836 157.433 173.917 1 57.18 ? O01 P0T 1001 A 1 HETATM 23 O O02 P0T . . . E 2 164.822 161.807 172.046 1 57.18 ? O02 P0T 1001 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 23 #