data_6U8H # _model_server_result.job_id 7kB7L-Ip-xfiovRoa1licQ _model_server_result.datetime_utc '2024-11-04 20:14:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6u8h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":103}' # _entry.id 6U8H # _exptl.entry_id 6U8H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 126.904 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IODIDE ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6U8H _cell.length_a 89.587 _cell.length_b 89.587 _cell.length_c 71.592 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6U8H _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall 'P 4abw 2nw' _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 I N N ? 3 J N N ? 3 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C ACE 1 C ACE 0 1_555 B N TRP 2 C TRP 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 B CH3 ACE 1 C ACE 0 1_555 B SG CYS 6 C CYS 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.767 ? covale ? covale3 B C LYS 7 C LYS 6 1_555 B N ALY 8 C ALY 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale4 B C ALY 8 C ALY 7 1_555 B N TYR 9 C TYR 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale5 B C HIS 13 C HIS 12 1_555 H N NH2 . C NH2 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? # _chem_comp.formula 'I -1' _chem_comp.formula_weight 126.904 _chem_comp.id IOD _chem_comp.mon_nstd_flag . _chem_comp.name 'IODIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6U8H _atom_sites.fract_transf_matrix[1][1] 0.011162 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011162 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013968 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 IOD A 1 201 2 IOD IOD . D 3 IOD A 1 202 3 IOD IOD . E 3 IOD A 1 203 4 IOD IOD . F 4 GOL A 1 204 2 GOL GOL . G 4 GOL A 1 205 3 GOL GOL . H 5 NH2 C 1 101 13 NH2 NH2 . I 3 IOD C 1 102 5 IOD IOD . J 3 IOD C 1 103 6 IOD IOD . K 3 IOD C 1 104 7 IOD IOD . L 6 PE3 C 1 105 1 PE3 PE3 . M 7 HOH A 1 301 130 HOH HOH . M 7 HOH A 2 302 36 HOH HOH . M 7 HOH A 3 303 95 HOH HOH . M 7 HOH A 4 304 61 HOH HOH . M 7 HOH A 5 305 40 HOH HOH . M 7 HOH A 6 306 94 HOH HOH . M 7 HOH A 7 307 19 HOH HOH . M 7 HOH A 8 308 70 HOH HOH . M 7 HOH A 9 309 71 HOH HOH . M 7 HOH A 10 310 21 HOH HOH . M 7 HOH A 11 311 57 HOH HOH . M 7 HOH A 12 312 64 HOH HOH . M 7 HOH A 13 313 144 HOH HOH . M 7 HOH A 14 314 47 HOH HOH . M 7 HOH A 15 315 107 HOH HOH . M 7 HOH A 16 316 46 HOH HOH . M 7 HOH A 17 317 32 HOH HOH . M 7 HOH A 18 318 134 HOH HOH . M 7 HOH A 19 319 52 HOH HOH . M 7 HOH A 20 320 121 HOH HOH . M 7 HOH A 21 321 31 HOH HOH . M 7 HOH A 22 322 23 HOH HOH . M 7 HOH A 23 323 38 HOH HOH . M 7 HOH A 24 324 69 HOH HOH . M 7 HOH A 25 325 15 HOH HOH . M 7 HOH A 26 326 68 HOH HOH . M 7 HOH A 27 327 18 HOH HOH . M 7 HOH A 28 328 89 HOH HOH . M 7 HOH A 29 329 74 HOH HOH . M 7 HOH A 30 330 91 HOH HOH . M 7 HOH A 31 331 51 HOH HOH . M 7 HOH A 32 332 72 HOH HOH . M 7 HOH A 33 333 29 HOH HOH . M 7 HOH A 34 334 81 HOH HOH . M 7 HOH A 35 335 5 HOH HOH . M 7 HOH A 36 336 6 HOH HOH . M 7 HOH A 37 337 8 HOH HOH . M 7 HOH A 38 338 76 HOH HOH . M 7 HOH A 39 339 34 HOH HOH . M 7 HOH A 40 340 11 HOH HOH . M 7 HOH A 41 341 27 HOH HOH . M 7 HOH A 42 342 35 HOH HOH . M 7 HOH A 43 343 83 HOH HOH . M 7 HOH A 44 344 22 HOH HOH . M 7 HOH A 45 345 141 HOH HOH . M 7 HOH A 46 346 82 HOH HOH . M 7 HOH A 47 347 4 HOH HOH . M 7 HOH A 48 348 56 HOH HOH . M 7 HOH A 49 349 78 HOH HOH . M 7 HOH A 50 350 148 HOH HOH . M 7 HOH A 51 351 41 HOH HOH . M 7 HOH A 52 352 33 HOH HOH . M 7 HOH A 53 353 103 HOH HOH . M 7 HOH A 54 354 20 HOH HOH . M 7 HOH A 55 355 48 HOH HOH . M 7 HOH A 56 356 39 HOH HOH . M 7 HOH A 57 357 133 HOH HOH . M 7 HOH A 58 358 79 HOH HOH . M 7 HOH A 59 359 60 HOH HOH . M 7 HOH A 60 360 26 HOH HOH . M 7 HOH A 61 361 63 HOH HOH . M 7 HOH A 62 362 54 HOH HOH . M 7 HOH A 63 363 65 HOH HOH . M 7 HOH A 64 364 66 HOH HOH . M 7 HOH A 65 365 14 HOH HOH . M 7 HOH A 66 366 58 HOH HOH . M 7 HOH A 67 367 138 HOH HOH . M 7 HOH A 68 368 25 HOH HOH . M 7 HOH A 69 369 149 HOH HOH . M 7 HOH A 70 370 118 HOH HOH . M 7 HOH A 71 371 142 HOH HOH . M 7 HOH A 72 372 110 HOH HOH . M 7 HOH A 73 373 131 HOH HOH . M 7 HOH A 74 374 50 HOH HOH . M 7 HOH A 75 375 42 HOH HOH . M 7 HOH A 76 376 17 HOH HOH . M 7 HOH A 77 377 122 HOH HOH . M 7 HOH A 78 378 132 HOH HOH . M 7 HOH A 79 379 101 HOH HOH . M 7 HOH A 80 380 96 HOH HOH . M 7 HOH A 81 381 104 HOH HOH . M 7 HOH A 82 382 135 HOH HOH . M 7 HOH A 83 383 90 HOH HOH . M 7 HOH A 84 384 85 HOH HOH . M 7 HOH A 85 385 111 HOH HOH . M 7 HOH A 86 386 143 HOH HOH . M 7 HOH A 87 387 75 HOH HOH . M 7 HOH A 88 388 13 HOH HOH . M 7 HOH A 89 389 117 HOH HOH . M 7 HOH A 90 390 92 HOH HOH . M 7 HOH A 91 391 109 HOH HOH . M 7 HOH A 92 392 115 HOH HOH . M 7 HOH A 93 393 114 HOH HOH . M 7 HOH A 94 394 140 HOH HOH . M 7 HOH A 95 395 116 HOH HOH . M 7 HOH A 96 396 147 HOH HOH . M 7 HOH A 97 397 129 HOH HOH . M 7 HOH A 98 398 88 HOH HOH . M 7 HOH A 99 399 112 HOH HOH . M 7 HOH A 100 400 62 HOH HOH . M 7 HOH A 101 401 119 HOH HOH . M 7 HOH A 102 402 120 HOH HOH . M 7 HOH A 103 403 37 HOH HOH . M 7 HOH A 104 404 55 HOH HOH . M 7 HOH A 105 405 43 HOH HOH . M 7 HOH A 106 406 59 HOH HOH . M 7 HOH A 107 407 105 HOH HOH . M 7 HOH A 108 408 108 HOH HOH . M 7 HOH A 109 409 145 HOH HOH . M 7 HOH A 110 410 150 HOH HOH . M 7 HOH A 111 411 93 HOH HOH . M 7 HOH A 112 412 77 HOH HOH . M 7 HOH A 113 413 102 HOH HOH . M 7 HOH A 114 414 146 HOH HOH . M 7 HOH A 115 415 124 HOH HOH . M 7 HOH A 116 416 137 HOH HOH . M 7 HOH A 117 417 113 HOH HOH . M 7 HOH A 118 418 139 HOH HOH . M 7 HOH A 119 419 125 HOH HOH . N 7 HOH C 1 201 2 HOH HOH . N 7 HOH C 2 202 7 HOH HOH . N 7 HOH C 3 203 10 HOH HOH . N 7 HOH C 4 204 24 HOH HOH . N 7 HOH C 5 205 49 HOH HOH . N 7 HOH C 6 206 45 HOH HOH . N 7 HOH C 7 207 53 HOH HOH . N 7 HOH C 8 208 98 HOH HOH . N 7 HOH C 9 209 97 HOH HOH . N 7 HOH C 10 210 67 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol I _atom_site.label_atom_id I _atom_site.label_comp_id IOD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 3 _atom_site.Cartn_x 13.573 _atom_site.Cartn_y 22.071 _atom_site.Cartn_z -4.218 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 41.81 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id I _atom_site.auth_comp_id IOD _atom_site.auth_seq_id 103 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #