data_6U8R
#
_model_server_result.job_id            0L-sOJcT4a2XVT2FkMnYhw 
_model_server_result.datetime_utc      '2024-11-21 17:24:21' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6u8r 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"S","auth_seq_id":603}' 
#
_entry.id    6U8R 
#
_exptl.entry_id    6U8R 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    16 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6U8R 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6U8R 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexadecameric 
_pdbx_struct_assembly.oligomeric_count      16 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 S N N 
? 4 T N N 
? 4 U N N 
? 4 V N N 
? 4 Y N N 
? 4 Z N N 
? 4 CA N N 
? 4 DA N N 
? 4 IA N N 
? 4 JA N N 
? 4 KA N N 
? 4 LA N N 
? 4 OA N N 
? 4 PA N N 
? 4 SA N N 
? 4 TA N N 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ATP doub 70 n n 
PG O2G ATP sing 71 n n 
PG O3G ATP sing 72 n n 
PG O3B ATP sing 73 n n 
O2G HOG2 ATP sing 74 n n 
O3G HOG3 ATP sing 75 n n 
PB O1B ATP doub 76 n n 
PB O2B ATP sing 77 n n 
PB O3B ATP sing 78 n n 
PB O3A ATP sing 79 n n 
O2B HOB2 ATP sing 80 n n 
PA O1A ATP doub 81 n n 
PA O2A ATP sing 82 n n 
PA O3A ATP sing 83 n n 
PA O5' ATP sing 84 n n 
O2A HOA2 ATP sing 85 n n 
O5' C5' ATP sing 86 n n 
C5' C4' ATP sing 87 n n 
C5' "H5'1" ATP sing 88 n n 
C5' "H5'2" ATP sing 89 n n 
C4' O4' ATP sing 90 n n 
C4' C3' ATP sing 91 n n 
C4' H4' ATP sing 92 n n 
O4' C1' ATP sing 93 n n 
C3' O3' ATP sing 94 n n 
C3' C2' ATP sing 95 n n 
C3' H3' ATP sing 96 n n 
O3' HO3' ATP sing 97 n n 
C2' O2' ATP sing 98 n n 
C2' C1' ATP sing 99 n n 
C2' H2' ATP sing 100 n n 
O2' HO2' ATP sing 101 n n 
C1' N9 ATP sing 102 n n 
C1' H1' ATP sing 103 n n 
N9 C8 ATP sing 104 n y 
N9 C4 ATP sing 105 n y 
C8 N7 ATP doub 106 n y 
C8 H8 ATP sing 107 n n 
N7 C5 ATP sing 108 n y 
C5 C6 ATP sing 109 n y 
C5 C4 ATP doub 110 n y 
C6 N6 ATP sing 111 n n 
C6 N1 ATP doub 112 n y 
N6 HN61 ATP sing 113 n n 
N6 HN62 ATP sing 114 n n 
N1 C2 ATP sing 115 n y 
C2 N3 ATP doub 116 n y 
C2 H2 ATP sing 117 n n 
N3 C4 ATP sing 118 n y 
#
_atom_sites.entry_id                     6U8R 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
Q 2 IMP A 1 601 603 IMP IMP . 
R 3 NAD A 1 602 701 NAD NAD . 
S 4 ATP A 1 603 903 ATP ATP . 
T 4 ATP A 1 604 904 ATP ATP . 
U 4 ATP B 1 601 517 ATP ATP . 
V 4 ATP B 1 602 518 ATP ATP . 
W 2 IMP B 1 603 603 IMP IMP . 
X 3 NAD B 1 604 701 NAD NAD . 
Y 4 ATP C 1 601 517 ATP ATP . 
Z 4 ATP C 1 602 518 ATP ATP . 
AA 2 IMP C 1 603 603 IMP IMP . 
BA 3 NAD C 1 604 701 NAD NAD . 
CA 4 ATP D 1 601 517 ATP ATP . 
DA 4 ATP D 1 602 518 ATP ATP . 
EA 2 IMP D 1 603 603 IMP IMP . 
FA 3 NAD D 1 604 701 NAD NAD . 
GA 2 IMP E 1 601 603 IMP IMP . 
HA 3 NAD E 1 602 701 NAD NAD . 
IA 4 ATP E 1 603 903 ATP ATP . 
JA 4 ATP E 1 604 904 ATP ATP . 
KA 4 ATP F 1 601 517 ATP ATP . 
LA 4 ATP F 1 602 518 ATP ATP . 
MA 2 IMP F 1 603 603 IMP IMP . 
NA 3 NAD F 1 604 701 NAD NAD . 
OA 4 ATP G 1 601 517 ATP ATP . 
PA 4 ATP G 1 602 518 ATP ATP . 
QA 2 IMP G 1 603 603 IMP IMP . 
RA 3 NAD G 1 604 701 NAD NAD . 
SA 4 ATP H 1 601 517 ATP ATP . 
TA 4 ATP H 1 602 518 ATP ATP . 
UA 2 IMP H 1 603 603 IMP IMP . 
VA 3 NAD H 1 604 701 NAD NAD . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . S 4 204.017 127.004 172.588 1 201.58 ? PG ATP 603 A 1 
HETATM 2 O O1G ATP . . . S 4 203.788 127.468 174.027 1 201.58 ? O1G ATP 603 A 1 
HETATM 3 O O2G ATP . . . S 4 203.114 127.783 171.667 1 201.58 ? O2G ATP 603 A 1 
HETATM 4 O O3G ATP . . . S 4 205.455 127.313 172.248 1 201.58 ? O3G ATP 603 A 1 
HETATM 5 P PB ATP . . . S 4 204.006 124.232 173.5 1 201.58 ? PB ATP 603 A 1 
HETATM 6 O O1B ATP . . . S 4 202.918 123.183 173.503 1 201.58 ? O1B ATP 603 A 1 
HETATM 7 O O2B ATP . . . S 4 204.177 124.775 174.871 1 201.58 ? O2B ATP 603 A 1 
HETATM 8 O O3B ATP . . . S 4 203.641 125.407 172.434 1 201.58 ? O3B ATP 603 A 1 
HETATM 9 P PA ATP . . . S 4 206.819 123.928 173.846 1 201.58 ? PA ATP 603 A 1 
HETATM 10 O O1A ATP . . . S 4 206.831 123.365 175.25 1 201.58 ? O1A ATP 603 A 1 
HETATM 11 O O2A ATP . . . S 4 206.874 125.449 173.934 1 201.58 ? O2A ATP 603 A 1 
HETATM 12 O O3A ATP . . . S 4 205.418 123.505 173.089 1 201.58 ? O3A ATP 603 A 1 
HETATM 13 O O5' ATP . . . S 4 208.119 123.329 172.914 1 201.58 ? O5' ATP 603 A 1 
HETATM 14 C C5' ATP . . . S 4 209.244 122.665 173.555 1 201.58 ? C5' ATP 603 A 1 
HETATM 15 C C4' ATP . . . S 4 209.736 121.645 172.727 1 201.58 ? C4' ATP 603 A 1 
HETATM 16 O O4' ATP . . . S 4 210.564 120.675 173.524 1 201.58 ? O4' ATP 603 A 1 
HETATM 17 C C3' ATP . . . S 4 208.539 120.744 172.169 1 201.58 ? C3' ATP 603 A 1 
HETATM 18 O O3' ATP . . . S 4 208.994 120.005 170.948 1 201.58 ? O3' ATP 603 A 1 
HETATM 19 C C2' ATP . . . S 4 208.322 119.918 173.074 1 201.58 ? C2' ATP 603 A 1 
HETATM 20 O O2' ATP . . . S 4 207.831 118.655 172.476 1 201.58 ? O2' ATP 603 A 1 
HETATM 21 C C1' ATP . . . S 4 209.765 119.675 173.831 1 201.58 ? C1' ATP 603 A 1 
HETATM 22 N N9 ATP . . . S 4 209.511 119.709 175.199 1 201.58 ? N9 ATP 603 A 1 
HETATM 23 C C8 ATP . . . S 4 208.564 120.093 176.032 1 201.58 ? C8 ATP 603 A 1 
HETATM 24 N N7 ATP . . . S 4 209.031 119.819 177.26 1 201.58 ? N7 ATP 603 A 1 
HETATM 25 C C5 ATP . . . S 4 210.252 119.292 177.141 1 201.58 ? C5 ATP 603 A 1 
HETATM 26 C C6 ATP . . . S 4 211.157 118.848 178.072 1 201.58 ? C6 ATP 603 A 1 
HETATM 27 N N6 ATP . . . S 4 211.358 118.688 179.481 1 201.58 ? N6 ATP 603 A 1 
HETATM 28 N N1 ATP . . . S 4 212.315 118.367 177.676 1 201.58 ? N1 ATP 603 A 1 
HETATM 29 C C2 ATP . . . S 4 212.622 118.288 176.359 1 201.58 ? C2 ATP 603 A 1 
HETATM 30 N N3 ATP . . . S 4 211.738 118.729 175.444 1 201.58 ? N3 ATP 603 A 1 
HETATM 31 C C4 ATP . . . S 4 210.561 119.225 175.853 1 201.58 ? C4 ATP 603 A 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    54 
_model_server_stats.query_time_ms           308 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           31 
#