data_6U8S
#
_model_server_result.job_id            b8yDCaQbPXEudLlvffF43g 
_model_server_result.datetime_utc      '2024-10-20 20:43:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6u8s 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"P","auth_seq_id":602}' 
#
_entry.id    6U8S 
#
_exptl.entry_id    6U8S 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              663.425 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            NICOTINAMIDE-ADENINE-DINUCLEOTIDE 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6U8S 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6U8S 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    octameric 
_pdbx_struct_assembly.oligomeric_count      8 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 J N N 
? 3 L N N 
? 3 N N N 
? 3 P N N 
? 3 R N N 
? 3 T N N 
? 3 V N N 
? 3 X N N 
#
_chem_comp.formula           'C21 H27 N7 O14 P2' 
_chem_comp.formula_weight    663.425 
_chem_comp.id                NAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              NICOTINAMIDE-ADENINE-DINUCLEOTIDE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAD doub 273 n n 
PA O2A NAD sing 274 n n 
PA O5B NAD sing 275 n n 
PA O3 NAD sing 276 n n 
O2A HOA2 NAD sing 277 n n 
O5B C5B NAD sing 278 n n 
C5B C4B NAD sing 279 n n 
C5B H51A NAD sing 280 n n 
C5B H52A NAD sing 281 n n 
C4B O4B NAD sing 282 n n 
C4B C3B NAD sing 283 n n 
C4B H4B NAD sing 284 n n 
O4B C1B NAD sing 285 n n 
C3B O3B NAD sing 286 n n 
C3B C2B NAD sing 287 n n 
C3B H3B NAD sing 288 n n 
O3B HO3A NAD sing 289 n n 
C2B O2B NAD sing 290 n n 
C2B C1B NAD sing 291 n n 
C2B H2B NAD sing 292 n n 
O2B HO2A NAD sing 293 n n 
C1B N9A NAD sing 294 n n 
C1B H1B NAD sing 295 n n 
N9A C8A NAD sing 296 n y 
N9A C4A NAD sing 297 n y 
C8A N7A NAD doub 298 n y 
C8A H8A NAD sing 299 n n 
N7A C5A NAD sing 300 n y 
C5A C6A NAD sing 301 n y 
C5A C4A NAD doub 302 n y 
C6A N6A NAD sing 303 n n 
C6A N1A NAD doub 304 n y 
N6A H61A NAD sing 305 n n 
N6A H62A NAD sing 306 n n 
N1A C2A NAD sing 307 n y 
C2A N3A NAD doub 308 n y 
C2A H2A NAD sing 309 n n 
N3A C4A NAD sing 310 n y 
O3 PN NAD sing 311 n n 
PN O1N NAD doub 312 n n 
PN O2N NAD sing 313 n n 
PN O5D NAD sing 314 n n 
O5D C5D NAD sing 315 n n 
C5D C4D NAD sing 316 n n 
C5D H51N NAD sing 317 n n 
C5D H52N NAD sing 318 n n 
C4D O4D NAD sing 319 n n 
C4D C3D NAD sing 320 n n 
C4D H4D NAD sing 321 n n 
O4D C1D NAD sing 322 n n 
C3D O3D NAD sing 323 n n 
C3D C2D NAD sing 324 n n 
C3D H3D NAD sing 325 n n 
O3D HO3N NAD sing 326 n n 
C2D O2D NAD sing 327 n n 
C2D C1D NAD sing 328 n n 
C2D H2D NAD sing 329 n n 
O2D HO2N NAD sing 330 n n 
C1D N1N NAD sing 331 n n 
C1D H1D NAD sing 332 n n 
N1N C2N NAD sing 333 n y 
N1N C6N NAD doub 334 n y 
C2N C3N NAD doub 335 n y 
C2N H2N NAD sing 336 n n 
C3N C7N NAD sing 337 n n 
C3N C4N NAD sing 338 n y 
C7N O7N NAD doub 339 n n 
C7N N7N NAD sing 340 n n 
N7N H71N NAD sing 341 n n 
N7N H72N NAD sing 342 n n 
C4N C5N NAD doub 343 n y 
C4N H4N NAD sing 344 n n 
C5N C6N NAD sing 345 n y 
C5N H5N NAD sing 346 n n 
C6N H6N NAD sing 347 n n 
#
_atom_sites.entry_id                     6U8S 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 2 IMP A 1 601 603 IMP IMP . 
J 3 NAD A 1 602 701 NAD NAD . 
K 2 IMP B 1 601 603 IMP IMP . 
L 3 NAD B 1 602 701 NAD NAD . 
M 2 IMP C 1 601 603 IMP IMP . 
N 3 NAD C 1 602 701 NAD NAD . 
O 2 IMP D 1 601 603 IMP IMP . 
P 3 NAD D 1 602 701 NAD NAD . 
Q 2 IMP E 1 601 603 IMP IMP . 
R 3 NAD E 1 602 701 NAD NAD . 
S 2 IMP F 1 601 603 IMP IMP . 
T 3 NAD F 1 602 701 NAD NAD . 
U 2 IMP G 1 601 603 IMP IMP . 
V 3 NAD G 1 602 701 NAD NAD . 
W 2 IMP H 1 601 603 IMP IMP . 
X 3 NAD H 1 602 701 NAD NAD . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAD . . . P 3 154.231 135.502 141.521 1 167.62 ? PA NAD 602 D 1 
HETATM 2 O O1A NAD . . . P 3 155.362 134.652 142.044 1 167.62 ? O1A NAD 602 D 1 
HETATM 3 O O2A NAD . . . P 3 153.522 134.785 140.397 1 167.62 ? O2A NAD 602 D 1 
HETATM 4 O O5B NAD . . . P 3 153.179 135.838 142.744 1 167.62 ? O5B NAD 602 D 1 
HETATM 5 C C5B NAD . . . P 3 152.037 136.581 142.428 1 167.62 ? C5B NAD 602 D 1 
HETATM 6 C C4B NAD . . . P 3 151.24 136.879 143.685 1 167.62 ? C4B NAD 602 D 1 
HETATM 7 O O4B NAD . . . P 3 150.553 135.514 144.214 1 167.62 ? O4B NAD 602 D 1 
HETATM 8 C C3B NAD . . . P 3 152.028 137.345 144.612 1 167.62 ? C3B NAD 602 D 1 
HETATM 9 O O3B NAD . . . P 3 151.546 138.687 145.062 1 167.62 ? O3B NAD 602 D 1 
HETATM 10 C C2B NAD . . . P 3 151.972 136.359 145.792 1 167.62 ? C2B NAD 602 D 1 
HETATM 11 O O2B NAD . . . P 3 151.679 137.028 146.936 1 167.62 ? O2B NAD 602 D 1 
HETATM 12 C C1B NAD . . . P 3 150.862 135.346 145.468 1 167.62 ? C1B NAD 602 D 1 
HETATM 13 N N9A NAD . . . P 3 151.4 133.991 145.674 1 167.62 ? N9A NAD 602 D 1 
HETATM 14 C C8A NAD . . . P 3 152.582 133.408 145.836 1 167.62 ? C8A NAD 602 D 1 
HETATM 15 N N7A NAD . . . P 3 152.354 132.102 145.979 1 167.62 ? N7A NAD 602 D 1 
HETATM 16 C C5A NAD . . . P 3 151.032 131.897 145.906 1 167.62 ? C5A NAD 602 D 1 
HETATM 17 C C6A NAD . . . P 3 150.271 130.759 145.986 1 167.62 ? C6A NAD 602 D 1 
HETATM 18 N N6A NAD . . . P 3 150.504 129.344 146.18 1 167.62 ? N6A NAD 602 D 1 
HETATM 19 N N1A NAD . . . P 3 148.957 130.832 145.882 1 167.62 ? N1A NAD 602 D 1 
HETATM 20 C C2A NAD . . . P 3 148.354 132.029 145.689 1 167.62 ? C2A NAD 602 D 1 
HETATM 21 N N3A NAD . . . P 3 149.1 133.151 145.607 1 167.62 ? N3A NAD 602 D 1 
HETATM 22 C C4A NAD . . . P 3 150.433 133.075 145.716 1 167.62 ? C4A NAD 602 D 1 
HETATM 23 O O3 NAD . . . P 3 154.836 136.926 140.974 1 167.62 ? O3 NAD 602 D 1 
HETATM 24 P PN NAD . . . P 3 155.599 137.984 141.972 1 167.62 ? PN NAD 602 D 1 
HETATM 25 O O1N NAD . . . P 3 155.976 137.282 143.253 1 167.62 ? O1N NAD 602 D 1 
HETATM 26 O O2N NAD . . . P 3 154.689 139.147 142.268 1 167.62 ? O2N NAD 602 D 1 
HETATM 27 O O5D NAD . . . P 3 156.949 138.507 141.192 1 167.62 ? O5D NAD 602 D 1 
HETATM 28 C C5D NAD . . . P 3 157.243 137.877 139.98 1 167.62 ? C5D NAD 602 D 1 
HETATM 29 C C4D NAD . . . P 3 158.685 138.161 139.631 1 167.62 ? C4D NAD 602 D 1 
HETATM 30 O O4D NAD . . . P 3 158.912 139.753 139.692 1 167.62 ? O4D NAD 602 D 1 
HETATM 31 C C3D NAD . . . P 3 159.461 137.634 140.533 1 167.62 ? C3D NAD 602 D 1 
HETATM 32 O O3D NAD . . . P 3 160.067 136.38 139.997 1 167.62 ? O3D NAD 602 D 1 
HETATM 33 C C2D NAD . . . P 3 160.574 138.662 140.793 1 167.62 ? C2D NAD 602 D 1 
HETATM 34 O O2D NAD . . . P 3 161.745 138.201 140.29 1 167.62 ? O2D NAD 602 D 1 
HETATM 35 C C1D NAD . . . P 3 160.15 139.935 140.039 1 167.62 ? C1D NAD 602 D 1 
HETATM 36 N N1N NAD . . . P 3 160.241 141.108 140.926 1 167.62 ? N1N NAD 602 D 1 
HETATM 37 C C2N NAD . . . P 3 161.424 141.442 141.481 1 167.62 ? C2N NAD 602 D 1 
HETATM 38 C C3N NAD . . . P 3 161.49 142.548 142.312 1 167.62 ? C3N NAD 602 D 1 
HETATM 39 C C7N NAD . . . P 3 162.815 142.963 142.928 1 167.62 ? C7N NAD 602 D 1 
HETATM 40 O O7N NAD . . . P 3 163.482 142.194 143.521 1 167.62 ? O7N NAD 602 D 1 
HETATM 41 N N7N NAD . . . P 3 163.272 144.327 142.748 1 167.62 ? N7N NAD 602 D 1 
HETATM 42 C C4N NAD . . . P 3 160.387 143.29 142.56 1 167.62 ? C4N NAD 602 D 1 
HETATM 43 C C5N NAD . . . P 3 159.204 142.948 142.003 1 167.62 ? C5N NAD 602 D 1 
HETATM 44 C C6N NAD . . . P 3 159.134 141.839 141.176 1 167.62 ? C6N NAD 602 D 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    30 
_model_server_stats.query_time_ms           318 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           44 
#