data_6U9C # _model_server_result.job_id 7k5GrQYMSKqWOkLtw6WBWw _model_server_result.datetime_utc '2025-01-10 20:51:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6u9c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 6U9C # _exptl.entry_id 6U9C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6U9C _cell.length_a 101.231 _cell.length_b 101.231 _cell.length_c 126.184 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6U9C _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall 'P 31 2"' _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 L N N # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 161 n n C1 O2 CIT sing 162 n n C1 C2 CIT sing 163 n n O2 HO2 CIT sing 164 n n C2 C3 CIT sing 165 n n C2 H21 CIT sing 166 n n C2 H22 CIT sing 167 n n C3 O7 CIT sing 168 n n C3 C4 CIT sing 169 n n C3 C6 CIT sing 170 n n O7 HO7 CIT sing 171 n n C4 C5 CIT sing 172 n n C4 H41 CIT sing 173 n n C4 H42 CIT sing 174 n n C5 O3 CIT doub 175 n n C5 O4 CIT sing 176 n n O4 HO4 CIT sing 177 n n C6 O5 CIT doub 178 n n C6 O6 CIT sing 179 n n O6 HO6 CIT sing 180 n n # _atom_sites.entry_id 6U9C _atom_sites.fract_transf_matrix[1][1] 0.009878 _atom_sites.fract_transf_matrix[1][2] 0.005703 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011407 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007925 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 CIT A 1 301 302 CIT CIT . E 3 CL A 1 302 303 CL CL . F 4 ACO B 1 301 301 ACO ACO . G 3 CL B 1 302 305 CL CL . H 4 ACO B 1 303 301 ACO ACO . I 5 SO4 B 1 304 302 SO4 SO4 . J 6 IPA B 1 305 303 IPA IPA . K 4 ACO C 1 301 301 ACO ACO . L 2 CIT C 1 302 302 CIT CIT . M 5 SO4 C 1 303 303 SO4 SO4 . N 6 IPA C 1 304 304 IPA IPA . O 7 HOH A 1 401 36 HOH HOH . O 7 HOH A 2 402 27 HOH HOH . O 7 HOH A 3 403 9 HOH HOH . O 7 HOH A 4 404 35 HOH HOH . O 7 HOH A 5 405 28 HOH HOH . P 7 HOH B 1 401 34 HOH HOH . P 7 HOH B 2 402 21 HOH HOH . P 7 HOH B 3 403 6 HOH HOH . P 7 HOH B 4 404 15 HOH HOH . P 7 HOH B 5 405 22 HOH HOH . P 7 HOH B 6 406 10 HOH HOH . P 7 HOH B 7 407 26 HOH HOH . P 7 HOH B 8 408 25 HOH HOH . P 7 HOH B 9 409 19 HOH HOH . P 7 HOH B 10 410 29 HOH HOH . P 7 HOH B 11 411 12 HOH HOH . P 7 HOH B 12 412 11 HOH HOH . P 7 HOH B 13 413 3 HOH HOH . P 7 HOH B 14 414 7 HOH HOH . P 7 HOH B 15 415 8 HOH HOH . P 7 HOH B 16 416 33 HOH HOH . P 7 HOH B 17 417 5 HOH HOH . P 7 HOH B 18 418 18 HOH HOH . P 7 HOH B 19 419 30 HOH HOH . P 7 HOH B 20 420 31 HOH HOH . P 7 HOH B 21 421 16 HOH HOH . Q 7 HOH C 1 401 24 HOH HOH . Q 7 HOH C 2 402 14 HOH HOH . Q 7 HOH C 3 403 13 HOH HOH . Q 7 HOH C 4 404 2 HOH HOH . Q 7 HOH C 5 405 23 HOH HOH . Q 7 HOH C 6 406 4 HOH HOH . Q 7 HOH C 7 407 17 HOH HOH . Q 7 HOH C 8 408 1 HOH HOH . Q 7 HOH C 9 409 20 HOH HOH . Q 7 HOH C 10 410 32 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . D 2 -66.997 50.841 -5.183 1 81.84 ? C1 CIT 301 A 1 HETATM 2 O O1 CIT . . . D 2 -66.291 50.041 -5.813 1 82.17 ? O1 CIT 301 A 1 HETATM 3 O O2 CIT . . . D 2 -66.446 51.759 -4.526 1 82.14 ? O2 CIT 301 A 1 HETATM 4 C C2 CIT . . . D 2 -68.493 50.669 -5.244 1 81.19 ? C2 CIT 301 A 1 HETATM 5 C C3 CIT . . . D 2 -69.125 50.862 -3.874 1 80.69 ? C3 CIT 301 A 1 HETATM 6 O O7 CIT . . . D 2 -68.288 51.722 -3.064 1 81.14 ? O7 CIT 301 A 1 HETATM 7 C C4 CIT . . . D 2 -70.491 51.515 -4.091 1 81.56 ? C4 CIT 301 A 1 HETATM 8 C C5 CIT . . . D 2 -71.527 51.086 -3.078 1 82.3 ? C5 CIT 301 A 1 HETATM 9 O O3 CIT . . . D 2 -72.351 50.175 -3.348 1 82.97 ? O3 CIT 301 A 1 HETATM 10 O O4 CIT . . . D 2 -71.58 51.646 -1.964 1 82.54 ? O4 CIT 301 A 1 HETATM 11 C C6 CIT . . . D 2 -69.268 49.523 -3.174 1 79.02 ? C6 CIT 301 A 1 HETATM 12 O O5 CIT . . . D 2 -69.733 48.531 -3.775 1 78.7 ? O5 CIT 301 A 1 HETATM 13 O O6 CIT . . . D 2 -68.905 49.41 -1.985 1 78.15 ? O6 CIT 301 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 13 #