data_6U9L # _model_server_result.job_id DPaQDwbttABEu_iGYp9eKw _model_server_result.datetime_utc '2024-10-19 07:36:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6u9l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":306}' # _entry.id 6U9L # _exptl.entry_id 6U9L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.082 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'THIOCYANATE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6U9L _cell.length_a 58.65 _cell.length_b 58.65 _cell.length_c 124.75 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6U9L _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 3 S CYS 3 1_555 A SG CYS 197 S CYS 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.906 ? metalc ? metalc1 A O SER 37 S SER 37 1_555 D K K . S K 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.718 ? metalc ? metalc2 A O HIS 39 S HIS 39 1_555 D K K . S K 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.629 ? metalc ? metalc3 A O LEU 42 S LEU 42 1_555 D K K . S K 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.682 ? metalc ? metalc4 A O ALA 160 S ALA 169 1_555 B K K . S K 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.692 ? metalc ? metalc5 A O TYR 162 S TYR 171 1_555 B K K . S K 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.915 ? metalc ? metalc6 A O VAL 165 S VAL 174 1_555 B K K . S K 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.695 ? metalc ? metalc7 A O GLY 184 S GLY 193 1_555 C K K . S K 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.912 ? metalc ? metalc8 A O PRO 185 S PRO 194 1_555 C K K . S K 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.051 ? metalc ? metalc9 A O GLU 186 S GLU 195 1_555 B K K . S K 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.01 ? metalc ? metalc10 A O LEU 187 S LEU 196 1_555 C K K . S K 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.75 ? metalc ? metalc11 A OD2 ASP 188 S ASP 197 1_555 B K K . S K 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.814 ? metalc ? metalc12 A O SER 251 S SER 260 1_555 C K K . S K 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.746 ? metalc ? metalc13 B K K . S K 301 1_555 K O HOH . S HOH 426 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.874 ? metalc ? metalc14 B K K . S K 301 1_555 K O HOH . S HOH 460 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.838 ? metalc ? metalc15 C K K . S K 302 1_555 K O HOH . S HOH 516 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.818 ? metalc ? metalc16 C K K . S K 302 1_555 K O HOH . S HOH 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.851 ? # _chem_comp.formula 'C N S -1' _chem_comp.formula_weight 58.082 _chem_comp.id SCN _chem_comp.mon_nstd_flag . _chem_comp.name 'THIOCYANATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S C SCN sing 290 n n C N SCN trip 291 n n # _atom_sites.entry_id 6U9L _atom_sites.fract_transf_matrix[1][1] 0.01705 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01705 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008016 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 K S 1 301 1 K K . C 2 K S 1 302 2 K K . D 2 K S 1 303 3 K K . E 3 GOL S 1 304 1 GOL GOL . F 4 SCN S 1 305 1 SCN SCN . G 4 SCN S 1 306 2 SCN SCN . H 4 SCN S 1 307 3 SCN SCN . I 4 SCN S 1 308 4 SCN SCN . J 4 SCN S 1 309 5 SCN SCN . K 5 HOH S 1 401 154 HOH HOH . K 5 HOH S 2 402 162 HOH HOH . K 5 HOH S 3 403 161 HOH HOH . K 5 HOH S 4 404 160 HOH HOH . K 5 HOH S 5 405 129 HOH HOH . K 5 HOH S 6 406 9 HOH HOH . K 5 HOH S 7 407 25 HOH HOH . K 5 HOH S 8 408 91 HOH HOH . K 5 HOH S 9 409 131 HOH HOH . K 5 HOH S 10 410 121 HOH HOH . K 5 HOH S 11 411 67 HOH HOH . K 5 HOH S 12 412 92 HOH HOH . K 5 HOH S 13 413 152 HOH HOH . K 5 HOH S 14 414 46 HOH HOH . K 5 HOH S 15 415 63 HOH HOH . K 5 HOH S 16 416 101 HOH HOH . K 5 HOH S 17 417 74 HOH HOH . K 5 HOH S 18 418 170 HOH HOH . K 5 HOH S 19 419 115 HOH HOH . K 5 HOH S 20 420 73 HOH HOH . K 5 HOH S 21 421 118 HOH HOH . K 5 HOH S 22 422 69 HOH HOH . K 5 HOH S 23 423 40 HOH HOH . K 5 HOH S 24 424 57 HOH HOH . K 5 HOH S 25 425 78 HOH HOH . K 5 HOH S 26 426 114 HOH HOH . K 5 HOH S 27 427 141 HOH HOH . K 5 HOH S 28 428 52 HOH HOH . K 5 HOH S 29 429 51 HOH HOH . K 5 HOH S 30 430 85 HOH HOH . K 5 HOH S 31 431 113 HOH HOH . K 5 HOH S 32 432 4 HOH HOH . K 5 HOH S 33 433 17 HOH HOH . K 5 HOH S 34 434 38 HOH HOH . K 5 HOH S 35 435 102 HOH HOH . K 5 HOH S 36 436 142 HOH HOH . K 5 HOH S 37 437 77 HOH HOH . K 5 HOH S 38 438 133 HOH HOH . K 5 HOH S 39 439 108 HOH HOH . K 5 HOH S 40 440 42 HOH HOH . K 5 HOH S 41 441 62 HOH HOH . K 5 HOH S 42 442 29 HOH HOH . K 5 HOH S 43 443 11 HOH HOH . K 5 HOH S 44 444 119 HOH HOH . K 5 HOH S 45 445 15 HOH HOH . K 5 HOH S 46 446 68 HOH HOH . K 5 HOH S 47 447 110 HOH HOH . K 5 HOH S 48 448 13 HOH HOH . K 5 HOH S 49 449 54 HOH HOH . K 5 HOH S 50 450 136 HOH HOH . K 5 HOH S 51 451 80 HOH HOH . K 5 HOH S 52 452 151 HOH HOH . K 5 HOH S 53 453 127 HOH HOH . K 5 HOH S 54 454 177 HOH HOH . K 5 HOH S 55 455 96 HOH HOH . K 5 HOH S 56 456 90 HOH HOH . K 5 HOH S 57 457 116 HOH HOH . K 5 HOH S 58 458 83 HOH HOH . K 5 HOH S 59 459 59 HOH HOH . K 5 HOH S 60 460 33 HOH HOH . K 5 HOH S 61 461 24 HOH HOH . K 5 HOH S 62 462 76 HOH HOH . K 5 HOH S 63 463 3 HOH HOH . K 5 HOH S 64 464 176 HOH HOH . K 5 HOH S 65 465 5 HOH HOH . K 5 HOH S 66 466 31 HOH HOH . K 5 HOH S 67 467 181 HOH HOH . K 5 HOH S 68 468 132 HOH HOH . K 5 HOH S 69 469 169 HOH HOH . K 5 HOH S 70 470 173 HOH HOH . K 5 HOH S 71 471 35 HOH HOH . K 5 HOH S 72 472 163 HOH HOH . K 5 HOH S 73 473 97 HOH HOH . K 5 HOH S 74 474 156 HOH HOH . K 5 HOH S 75 475 1 HOH HOH . K 5 HOH S 76 476 6 HOH HOH . K 5 HOH S 77 477 159 HOH HOH . K 5 HOH S 78 478 98 HOH HOH . K 5 HOH S 79 479 21 HOH HOH . K 5 HOH S 80 480 128 HOH HOH . K 5 HOH S 81 481 10 HOH HOH . K 5 HOH S 82 482 112 HOH HOH . K 5 HOH S 83 483 146 HOH HOH . K 5 HOH S 84 484 124 HOH HOH . K 5 HOH S 85 485 149 HOH HOH . K 5 HOH S 86 486 103 HOH HOH . K 5 HOH S 87 487 65 HOH HOH . K 5 HOH S 88 488 2 HOH HOH . K 5 HOH S 89 489 18 HOH HOH . K 5 HOH S 90 490 84 HOH HOH . K 5 HOH S 91 491 93 HOH HOH . K 5 HOH S 92 492 28 HOH HOH . K 5 HOH S 93 493 111 HOH HOH . K 5 HOH S 94 494 36 HOH HOH . K 5 HOH S 95 495 39 HOH HOH . K 5 HOH S 96 496 61 HOH HOH . K 5 HOH S 97 497 30 HOH HOH . K 5 HOH S 98 498 140 HOH HOH . K 5 HOH S 99 499 26 HOH HOH . K 5 HOH S 100 500 22 HOH HOH . K 5 HOH S 101 501 66 HOH HOH . K 5 HOH S 102 502 105 HOH HOH . K 5 HOH S 103 503 19 HOH HOH . K 5 HOH S 104 504 130 HOH HOH . K 5 HOH S 105 505 125 HOH HOH . K 5 HOH S 106 506 137 HOH HOH . K 5 HOH S 107 507 145 HOH HOH . K 5 HOH S 108 508 32 HOH HOH . K 5 HOH S 109 509 87 HOH HOH . K 5 HOH S 110 510 14 HOH HOH . K 5 HOH S 111 511 147 HOH HOH . K 5 HOH S 112 512 75 HOH HOH . K 5 HOH S 113 513 82 HOH HOH . K 5 HOH S 114 514 64 HOH HOH . K 5 HOH S 115 515 139 HOH HOH . K 5 HOH S 116 516 23 HOH HOH . K 5 HOH S 117 517 45 HOH HOH . K 5 HOH S 118 518 99 HOH HOH . K 5 HOH S 119 519 71 HOH HOH . K 5 HOH S 120 520 134 HOH HOH . K 5 HOH S 121 521 106 HOH HOH . K 5 HOH S 122 522 109 HOH HOH . K 5 HOH S 123 523 138 HOH HOH . K 5 HOH S 124 524 179 HOH HOH . K 5 HOH S 125 525 48 HOH HOH . K 5 HOH S 126 526 117 HOH HOH . K 5 HOH S 127 527 148 HOH HOH . K 5 HOH S 128 528 44 HOH HOH . K 5 HOH S 129 529 180 HOH HOH . K 5 HOH S 130 530 104 HOH HOH . K 5 HOH S 131 531 16 HOH HOH . K 5 HOH S 132 532 100 HOH HOH . K 5 HOH S 133 533 70 HOH HOH . K 5 HOH S 134 534 55 HOH HOH . K 5 HOH S 135 535 41 HOH HOH . K 5 HOH S 136 536 178 HOH HOH . K 5 HOH S 137 537 60 HOH HOH . K 5 HOH S 138 538 122 HOH HOH . K 5 HOH S 139 539 153 HOH HOH . K 5 HOH S 140 540 56 HOH HOH . K 5 HOH S 141 541 27 HOH HOH . K 5 HOH S 142 542 94 HOH HOH . K 5 HOH S 143 543 172 HOH HOH . K 5 HOH S 144 544 165 HOH HOH . K 5 HOH S 145 545 8 HOH HOH . K 5 HOH S 146 546 47 HOH HOH . K 5 HOH S 147 547 43 HOH HOH . K 5 HOH S 148 548 144 HOH HOH . K 5 HOH S 149 549 34 HOH HOH . K 5 HOH S 150 550 123 HOH HOH . K 5 HOH S 151 551 155 HOH HOH . K 5 HOH S 152 552 86 HOH HOH . K 5 HOH S 153 553 158 HOH HOH . K 5 HOH S 154 554 120 HOH HOH . K 5 HOH S 155 555 175 HOH HOH . K 5 HOH S 156 556 20 HOH HOH . K 5 HOH S 157 557 143 HOH HOH . K 5 HOH S 158 558 7 HOH HOH . K 5 HOH S 159 559 72 HOH HOH . K 5 HOH S 160 560 79 HOH HOH . K 5 HOH S 161 561 164 HOH HOH . K 5 HOH S 162 562 50 HOH HOH . K 5 HOH S 163 563 58 HOH HOH . K 5 HOH S 164 564 150 HOH HOH . K 5 HOH S 165 565 174 HOH HOH . K 5 HOH S 166 566 182 HOH HOH . K 5 HOH S 167 567 88 HOH HOH . K 5 HOH S 168 568 168 HOH HOH . K 5 HOH S 169 569 107 HOH HOH . K 5 HOH S 170 570 135 HOH HOH . K 5 HOH S 171 571 157 HOH HOH . K 5 HOH S 172 572 171 HOH HOH . K 5 HOH S 173 573 183 HOH HOH . K 5 HOH S 174 574 53 HOH HOH . K 5 HOH S 175 575 184 HOH HOH . K 5 HOH S 176 576 12 HOH HOH . K 5 HOH S 177 577 81 HOH HOH . K 5 HOH S 178 578 37 HOH HOH . K 5 HOH S 179 579 126 HOH HOH . K 5 HOH S 180 580 89 HOH HOH . K 5 HOH S 181 581 95 HOH HOH . K 5 HOH S 182 582 167 HOH HOH . K 5 HOH S 183 583 166 HOH HOH . K 5 HOH S 184 584 49 HOH HOH . K 5 HOH S 185 585 185 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SCN . . . G 4 10.471 -33.918 -13.353 1 48.54 ? S SCN 306 S 1 HETATM 2 C C SCN . . . G 4 10.134 -35.252 -14.292 1 41.58 ? C SCN 306 S 1 HETATM 3 N N SCN . . . G 4 9.905 -36.155 -14.931 1 43.2 ? N SCN 306 S 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 3 #