data_6UA4 # _model_server_result.job_id 3-6KySi3ZVz2CNcbHDJaBQ _model_server_result.datetime_utc '2024-10-20 20:43:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ua4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"T","auth_seq_id":604}' # _entry.id 6UA4 # _exptl.entry_id 6UA4 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 348.206 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'INOSINIC ACID' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6UA4 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6UA4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexadecameric _pdbx_struct_assembly.oligomeric_count 16 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 T N N ? 4 Y N N ? 4 CA N N ? 4 HA N N ? 4 MA N N ? 4 RA N N ? 4 VA N N ? 4 AB N N # _chem_comp.formula 'C10 H13 N4 O8 P' _chem_comp.formula_weight 348.206 _chem_comp.id IMP _chem_comp.mon_nstd_flag n _chem_comp.name 'INOSINIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1P IMP doub 270 n n P O2P IMP sing 271 n n P O3P IMP sing 272 n n P O5' IMP sing 273 n n O2P HOP2 IMP sing 274 n n O3P HOP3 IMP sing 275 n n O5' C5' IMP sing 276 n n C5' C4' IMP sing 277 n n C5' "H5'1" IMP sing 278 n n C5' "H5'2" IMP sing 279 n n C4' O4' IMP sing 280 n n C4' C3' IMP sing 281 n n C4' H4' IMP sing 282 n n O4' C1' IMP sing 283 n n C3' O3' IMP sing 284 n n C3' C2' IMP sing 285 n n C3' H3' IMP sing 286 n n O3' HO3' IMP sing 287 n n C2' O2' IMP sing 288 n n C2' C1' IMP sing 289 n n C2' H2' IMP sing 290 n n O2' HO2' IMP sing 291 n n C1' N9 IMP sing 292 n n C1' H1' IMP sing 293 n n N9 C8 IMP sing 294 n y N9 C4 IMP sing 295 n y C8 N7 IMP doub 296 n y C8 H8 IMP sing 297 n n N7 C5 IMP sing 298 n y C5 C6 IMP sing 299 n n C5 C4 IMP doub 300 n y C6 O6 IMP doub 301 n n C6 N1 IMP sing 302 n n N1 C2 IMP sing 303 n n N1 HN1 IMP sing 304 n n C2 N3 IMP doub 305 n n C2 H2 IMP sing 306 n n N3 C4 IMP sing 307 n n # _atom_sites.entry_id 6UA4 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code Q 2 GTP A 1 601 517 GTP GTP . R 2 GTP A 1 602 518 GTP GTP . S 3 ATP A 1 603 519 ATP ATP . T 4 IMP A 1 604 603 IMP IMP . U 5 NAD A 1 605 701 NAD NAD . V 2 GTP B 1 601 517 GTP GTP . W 2 GTP B 1 602 518 GTP GTP . X 3 ATP B 1 603 519 ATP ATP . Y 4 IMP B 1 604 603 IMP IMP . Z 5 NAD B 1 605 701 NAD NAD . AA 3 ATP C 1 601 517 ATP ATP . BA 3 ATP C 1 602 518 ATP ATP . CA 4 IMP C 1 603 603 IMP IMP . DA 5 NAD C 1 604 701 NAD NAD . EA 2 GTP D 1 601 517 GTP GTP . FA 2 GTP D 1 602 518 GTP GTP . GA 3 ATP D 1 603 519 ATP ATP . HA 4 IMP D 1 604 603 IMP IMP . IA 5 NAD D 1 605 701 NAD NAD . JA 2 GTP E 1 601 517 GTP GTP . KA 2 GTP E 1 602 518 GTP GTP . LA 3 ATP E 1 603 519 ATP ATP . MA 4 IMP E 1 604 603 IMP IMP . NA 5 NAD E 1 605 701 NAD NAD . OA 2 GTP F 1 601 517 GTP GTP . PA 2 GTP F 1 602 518 GTP GTP . QA 3 ATP F 1 603 519 ATP ATP . RA 4 IMP F 1 604 603 IMP IMP . SA 5 NAD F 1 605 701 NAD NAD . TA 3 ATP G 1 601 517 ATP ATP . UA 3 ATP G 1 602 518 ATP ATP . VA 4 IMP G 1 603 603 IMP IMP . WA 5 NAD G 1 604 701 NAD NAD . XA 2 GTP H 1 601 517 GTP GTP . YA 2 GTP H 1 602 518 GTP GTP . ZA 3 ATP H 1 603 519 ATP ATP . AB 4 IMP H 1 604 603 IMP IMP . BB 5 NAD H 1 605 701 NAD NAD . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P IMP . . . T 4 176.816 147.597 185.955 1 104.44 ? P IMP 604 A 1 HETATM 2 O O1P IMP . . . T 4 176.157 146.986 184.75 1 104.44 ? O1P IMP 604 A 1 HETATM 3 O O2P IMP . . . T 4 176.415 148.979 186.376 1 104.44 ? O2P IMP 604 A 1 HETATM 4 O O3P IMP . . . T 4 178.298 147.595 185.713 1 104.44 ? O3P IMP 604 A 1 HETATM 5 O O5' IMP . . . T 4 176.491 146.657 187.193 1 104.44 ? O5' IMP 604 A 1 HETATM 6 C C5' IMP . . . T 4 176.404 145.252 187.036 1 104.44 ? C5' IMP 604 A 1 HETATM 7 C C4' IMP . . . T 4 175.612 144.616 188.146 1 104.44 ? C4' IMP 604 A 1 HETATM 8 O O4' IMP . . . T 4 174.208 144.731 187.855 1 104.44 ? O4' IMP 604 A 1 HETATM 9 C C3' IMP . . . T 4 175.811 143.127 188.333 1 104.44 ? C3' IMP 604 A 1 HETATM 10 O O3' IMP . . . T 4 176.982 142.802 189.054 1 104.44 ? O3' IMP 604 A 1 HETATM 11 C C2' IMP . . . T 4 174.531 142.693 189.035 1 104.44 ? C2' IMP 604 A 1 HETATM 12 O O2' IMP . . . T 4 174.643 142.881 190.435 1 104.44 ? O2' IMP 604 A 1 HETATM 13 C C1' IMP . . . T 4 173.508 143.693 188.494 1 104.44 ? C1' IMP 604 A 1 HETATM 14 N N9 IMP . . . T 4 172.612 143.07 187.516 1 104.44 ? N9 IMP 604 A 1 HETATM 15 C C8 IMP . . . T 4 172.998 142.173 186.606 1 104.44 ? C8 IMP 604 A 1 HETATM 16 N N7 IMP . . . T 4 171.924 141.827 185.894 1 104.44 ? N7 IMP 604 A 1 HETATM 17 C C5 IMP . . . T 4 170.903 142.506 186.375 1 104.44 ? C5 IMP 604 A 1 HETATM 18 C C6 IMP . . . T 4 169.453 142.512 185.955 1 104.44 ? C6 IMP 604 A 1 HETATM 19 O O6 IMP . . . T 4 169.125 141.818 185.067 1 104.44 ? O6 IMP 604 A 1 HETATM 20 N N1 IMP . . . T 4 168.514 143.337 186.626 1 104.44 ? N1 IMP 604 A 1 HETATM 21 C C2 IMP . . . T 4 168.983 144.155 187.697 1 104.44 ? C2 IMP 604 A 1 HETATM 22 N N3 IMP . . . T 4 170.376 144.16 188.098 1 104.44 ? N3 IMP 604 A 1 HETATM 23 C C4 IMP . . . T 4 171.329 143.29 187.382 1 104.44 ? C4 IMP 604 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 49 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 23 #