data_6UBP # _model_server_result.job_id rG-ObRDXfrG7gVq-Me6AUQ _model_server_result.datetime_utc '2024-11-05 14:05:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ubp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":503}' # _entry.id 6UBP # _exptl.entry_id 6UBP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 28.01 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CARBON MONOXIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6UBP _cell.length_a 86.944 _cell.length_b 97.727 _cell.length_c 130.628 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6UBP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 298 A CYS 308 1_555 B SG CYS 298 B CYS 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc1 A NE2 HIS 336 A HIS 346 1_555 C FE HEM . A HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc2 B NE2 HIS 336 B HIS 346 1_555 F FE HEM . B HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? # _chem_comp.formula 'C O' _chem_comp.formula_weight 28.01 _chem_comp.id CMO _chem_comp.mon_nstd_flag . _chem_comp.name 'CARBON MONOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _chem_comp_bond.atom_id_1 C _chem_comp_bond.atom_id_2 O _chem_comp_bond.comp_id CMO _chem_comp_bond.value_order trip _chem_comp_bond.pdbx_ordinal 70 _chem_comp_bond.pdbx_stereo_config n _chem_comp_bond.pdbx_aromatic_flag n # _atom_sites.entry_id 6UBP _atom_sites.fract_transf_matrix[1][1] 0.011502 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010233 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007655 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEM A 1 501 1 HEM HEM . D 3 TRP A 1 502 2 TRP TRP . E 4 CMO A 1 503 1 CMO CMO . F 2 HEM B 1 501 2 HEM HEM . G 3 TRP B 1 502 3 TRP TRP . H 4 CMO B 1 503 2 CMO CMO . I 5 HOH A 1 601 58 HOH HOH . I 5 HOH A 2 602 48 HOH HOH . I 5 HOH A 3 603 59 HOH HOH . I 5 HOH A 4 604 57 HOH HOH . I 5 HOH A 5 605 10 HOH HOH . I 5 HOH A 6 606 66 HOH HOH . I 5 HOH A 7 607 3 HOH HOH . I 5 HOH A 8 608 80 HOH HOH . I 5 HOH A 9 609 53 HOH HOH . I 5 HOH A 10 610 8 HOH HOH . I 5 HOH A 11 611 34 HOH HOH . I 5 HOH A 12 612 60 HOH HOH . I 5 HOH A 13 613 12 HOH HOH . I 5 HOH A 14 614 67 HOH HOH . I 5 HOH A 15 615 52 HOH HOH . I 5 HOH A 16 616 76 HOH HOH . I 5 HOH A 17 617 13 HOH HOH . I 5 HOH A 18 618 2 HOH HOH . I 5 HOH A 19 619 45 HOH HOH . I 5 HOH A 20 620 46 HOH HOH . I 5 HOH A 21 621 64 HOH HOH . I 5 HOH A 22 622 6 HOH HOH . I 5 HOH A 23 623 1 HOH HOH . I 5 HOH A 24 624 47 HOH HOH . I 5 HOH A 25 625 63 HOH HOH . I 5 HOH A 26 626 28 HOH HOH . I 5 HOH A 27 627 24 HOH HOH . I 5 HOH A 28 628 56 HOH HOH . I 5 HOH A 29 629 44 HOH HOH . I 5 HOH A 30 630 79 HOH HOH . I 5 HOH A 31 631 11 HOH HOH . I 5 HOH A 32 632 7 HOH HOH . I 5 HOH A 33 633 5 HOH HOH . I 5 HOH A 34 634 33 HOH HOH . I 5 HOH A 35 635 50 HOH HOH . I 5 HOH A 36 636 49 HOH HOH . J 5 HOH B 1 601 20 HOH HOH . J 5 HOH B 2 602 38 HOH HOH . J 5 HOH B 3 603 39 HOH HOH . J 5 HOH B 4 604 82 HOH HOH . J 5 HOH B 5 605 40 HOH HOH . J 5 HOH B 6 606 17 HOH HOH . J 5 HOH B 7 607 86 HOH HOH . J 5 HOH B 8 608 75 HOH HOH . J 5 HOH B 9 609 83 HOH HOH . J 5 HOH B 10 610 61 HOH HOH . J 5 HOH B 11 611 19 HOH HOH . J 5 HOH B 12 612 41 HOH HOH . J 5 HOH B 13 613 25 HOH HOH . J 5 HOH B 14 614 18 HOH HOH . J 5 HOH B 15 615 30 HOH HOH . J 5 HOH B 16 616 15 HOH HOH . J 5 HOH B 17 617 31 HOH HOH . J 5 HOH B 18 618 35 HOH HOH . J 5 HOH B 19 619 62 HOH HOH . J 5 HOH B 20 620 71 HOH HOH . J 5 HOH B 21 621 84 HOH HOH . J 5 HOH B 22 622 21 HOH HOH . J 5 HOH B 23 623 37 HOH HOH . J 5 HOH B 24 624 65 HOH HOH . J 5 HOH B 25 625 70 HOH HOH . J 5 HOH B 26 626 32 HOH HOH . J 5 HOH B 27 627 23 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C CMO . . . H 4 101.237 26.315 171.442 1 101.53 ? C CMO 503 B 1 HETATM 2 O O CMO . . . H 4 100.571 27.227 171.527 1 101.11 ? O CMO 503 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 2 #