data_6UCZ # _model_server_result.job_id mZts-eIyP0VrmN4_fyiiSQ _model_server_result.datetime_utc '2024-11-14 15:47:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ucz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":306}' # _entry.id 6UCZ # _exptl.entry_id 6UCZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.67 _cell.angle_gamma 90 _cell.entry_id 6UCZ _cell.length_a 48.83 _cell.length_b 81.48 _cell.length_c 71.17 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6UCZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,M 1 1 B,G,H,I,J,K,L,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 I N N ? 5 J N N ? 5 K N N ? 5 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 J NA NA . B NA 304 1_555 N O HOH . B HOH 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc2 L NA NA . B NA 306 1_555 N O HOH . B HOH 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.639 ? metalc ? metalc3 L NA NA . B NA 306 1_555 N O HOH . B HOH 510 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.057 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6UCZ _atom_sites.fract_transf_matrix[1][1] 0.020479 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004604 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012273 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014402 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PMM A 1 301 301 PMM PMM . D 3 CIT A 1 302 401 CIT CIT . E 4 ACT A 1 303 501 ACT ACT . F 5 NA A 1 304 304 NA NA . G 2 PMM B 1 301 301 PMM PMM . H 6 EDO B 1 302 401 EDO EDO . I 5 NA B 1 303 306 NA NA . J 5 NA B 1 304 501 NA NA . K 5 NA B 1 305 502 NA NA . L 5 NA B 1 306 503 NA NA . M 7 HOH A 1 401 158 HOH HOH . M 7 HOH A 2 402 197 HOH HOH . M 7 HOH A 3 403 207 HOH HOH . M 7 HOH A 4 404 166 HOH HOH . M 7 HOH A 5 405 60 HOH HOH . M 7 HOH A 6 406 220 HOH HOH . M 7 HOH A 7 407 49 HOH HOH . M 7 HOH A 8 408 23 HOH HOH . M 7 HOH A 9 409 38 HOH HOH . M 7 HOH A 10 410 6 HOH HOH . M 7 HOH A 11 411 96 HOH HOH . M 7 HOH A 12 412 142 HOH HOH . M 7 HOH A 13 413 5 HOH HOH . M 7 HOH A 14 414 48 HOH HOH . M 7 HOH A 15 415 55 HOH HOH . M 7 HOH A 16 416 94 HOH HOH . M 7 HOH A 17 417 159 HOH HOH . M 7 HOH A 18 418 22 HOH HOH . M 7 HOH A 19 419 39 HOH HOH . M 7 HOH A 20 420 85 HOH HOH . M 7 HOH A 21 421 69 HOH HOH . M 7 HOH A 22 422 50 HOH HOH . M 7 HOH A 23 423 188 HOH HOH . M 7 HOH A 24 424 88 HOH HOH . M 7 HOH A 25 425 7 HOH HOH . M 7 HOH A 26 426 28 HOH HOH . M 7 HOH A 27 427 251 HOH HOH . M 7 HOH A 28 428 93 HOH HOH . M 7 HOH A 29 429 123 HOH HOH . M 7 HOH A 30 430 16 HOH HOH . M 7 HOH A 31 431 36 HOH HOH . M 7 HOH A 32 432 62 HOH HOH . M 7 HOH A 33 433 102 HOH HOH . M 7 HOH A 34 434 54 HOH HOH . M 7 HOH A 35 435 155 HOH HOH . M 7 HOH A 36 436 149 HOH HOH . M 7 HOH A 37 437 144 HOH HOH . M 7 HOH A 38 438 119 HOH HOH . M 7 HOH A 39 439 17 HOH HOH . M 7 HOH A 40 440 95 HOH HOH . M 7 HOH A 41 441 134 HOH HOH . M 7 HOH A 42 442 143 HOH HOH . M 7 HOH A 43 443 115 HOH HOH . M 7 HOH A 44 444 31 HOH HOH . M 7 HOH A 45 445 106 HOH HOH . M 7 HOH A 46 446 186 HOH HOH . M 7 HOH A 47 447 47 HOH HOH . M 7 HOH A 48 448 77 HOH HOH . M 7 HOH A 49 449 191 HOH HOH . M 7 HOH A 50 450 162 HOH HOH . M 7 HOH A 51 451 71 HOH HOH . M 7 HOH A 52 452 100 HOH HOH . M 7 HOH A 53 453 61 HOH HOH . M 7 HOH A 54 454 156 HOH HOH . M 7 HOH A 55 455 157 HOH HOH . M 7 HOH A 56 456 8 HOH HOH . M 7 HOH A 57 457 120 HOH HOH . M 7 HOH A 58 458 219 HOH HOH . M 7 HOH A 59 459 130 HOH HOH . M 7 HOH A 60 460 249 HOH HOH . M 7 HOH A 61 461 160 HOH HOH . M 7 HOH A 62 462 187 HOH HOH . M 7 HOH A 63 463 205 HOH HOH . M 7 HOH A 64 464 165 HOH HOH . M 7 HOH A 65 465 117 HOH HOH . M 7 HOH A 66 466 84 HOH HOH . M 7 HOH A 67 467 34 HOH HOH . M 7 HOH A 68 468 66 HOH HOH . M 7 HOH A 69 469 12 HOH HOH . M 7 HOH A 70 470 208 HOH HOH . M 7 HOH A 71 471 242 HOH HOH . M 7 HOH A 72 472 58 HOH HOH . M 7 HOH A 73 473 131 HOH HOH . M 7 HOH A 74 474 113 HOH HOH . M 7 HOH A 75 475 167 HOH HOH . M 7 HOH A 76 476 114 HOH HOH . M 7 HOH A 77 477 164 HOH HOH . M 7 HOH A 78 478 253 HOH HOH . M 7 HOH A 79 479 121 HOH HOH . M 7 HOH A 80 480 252 HOH HOH . M 7 HOH A 81 481 250 HOH HOH . M 7 HOH A 82 482 152 HOH HOH . M 7 HOH A 83 483 133 HOH HOH . M 7 HOH A 84 484 239 HOH HOH . M 7 HOH A 85 485 63 HOH HOH . M 7 HOH A 86 486 200 HOH HOH . M 7 HOH A 87 487 193 HOH HOH . M 7 HOH A 88 488 199 HOH HOH . M 7 HOH A 89 489 234 HOH HOH . M 7 HOH A 90 490 161 HOH HOH . M 7 HOH A 91 491 2 HOH HOH . M 7 HOH A 92 492 105 HOH HOH . M 7 HOH A 93 493 132 HOH HOH . M 7 HOH A 94 494 109 HOH HOH . M 7 HOH A 95 495 235 HOH HOH . M 7 HOH A 96 496 56 HOH HOH . M 7 HOH A 97 497 201 HOH HOH . M 7 HOH A 98 498 236 HOH HOH . M 7 HOH A 99 499 254 HOH HOH . M 7 HOH A 100 500 262 HOH HOH . M 7 HOH A 101 501 126 HOH HOH . M 7 HOH A 102 502 203 HOH HOH . M 7 HOH A 103 503 228 HOH HOH . M 7 HOH A 104 504 97 HOH HOH . M 7 HOH A 105 505 198 HOH HOH . M 7 HOH A 106 506 261 HOH HOH . M 7 HOH A 107 507 237 HOH HOH . M 7 HOH A 108 508 163 HOH HOH . M 7 HOH A 109 509 209 HOH HOH . M 7 HOH A 110 510 127 HOH HOH . M 7 HOH A 111 511 192 HOH HOH . N 7 HOH B 1 401 218 HOH HOH . N 7 HOH B 2 402 260 HOH HOH . N 7 HOH B 3 403 72 HOH HOH . N 7 HOH B 4 404 86 HOH HOH . N 7 HOH B 5 405 190 HOH HOH . N 7 HOH B 6 406 104 HOH HOH . N 7 HOH B 7 407 108 HOH HOH . N 7 HOH B 8 408 64 HOH HOH . N 7 HOH B 9 409 43 HOH HOH . N 7 HOH B 10 410 101 HOH HOH . N 7 HOH B 11 411 151 HOH HOH . N 7 HOH B 12 412 154 HOH HOH . N 7 HOH B 13 413 27 HOH HOH . N 7 HOH B 14 414 174 HOH HOH . N 7 HOH B 15 415 35 HOH HOH . N 7 HOH B 16 416 202 HOH HOH . N 7 HOH B 17 417 32 HOH HOH . N 7 HOH B 18 418 194 HOH HOH . N 7 HOH B 19 419 80 HOH HOH . N 7 HOH B 20 420 103 HOH HOH . N 7 HOH B 21 421 26 HOH HOH . N 7 HOH B 22 422 185 HOH HOH . N 7 HOH B 23 423 184 HOH HOH . N 7 HOH B 24 424 40 HOH HOH . N 7 HOH B 25 425 4 HOH HOH . N 7 HOH B 26 426 153 HOH HOH . N 7 HOH B 27 427 37 HOH HOH . N 7 HOH B 28 428 87 HOH HOH . N 7 HOH B 29 429 9 HOH HOH . N 7 HOH B 30 430 82 HOH HOH . N 7 HOH B 31 431 11 HOH HOH . N 7 HOH B 32 432 41 HOH HOH . N 7 HOH B 33 433 92 HOH HOH . N 7 HOH B 34 434 170 HOH HOH . N 7 HOH B 35 435 91 HOH HOH . N 7 HOH B 36 436 99 HOH HOH . N 7 HOH B 37 437 173 HOH HOH . N 7 HOH B 38 438 18 HOH HOH . N 7 HOH B 39 439 15 HOH HOH . N 7 HOH B 40 440 52 HOH HOH . N 7 HOH B 41 441 178 HOH HOH . N 7 HOH B 42 442 57 HOH HOH . N 7 HOH B 43 443 68 HOH HOH . N 7 HOH B 44 444 74 HOH HOH . N 7 HOH B 45 445 183 HOH HOH . N 7 HOH B 46 446 136 HOH HOH . N 7 HOH B 47 447 110 HOH HOH . N 7 HOH B 48 448 98 HOH HOH . N 7 HOH B 49 449 148 HOH HOH . N 7 HOH B 50 450 75 HOH HOH . N 7 HOH B 51 451 111 HOH HOH . N 7 HOH B 52 452 90 HOH HOH . N 7 HOH B 53 453 20 HOH HOH . N 7 HOH B 54 454 1 HOH HOH . N 7 HOH B 55 455 76 HOH HOH . N 7 HOH B 56 456 44 HOH HOH . N 7 HOH B 57 457 19 HOH HOH . N 7 HOH B 58 458 79 HOH HOH . N 7 HOH B 59 459 3 HOH HOH . N 7 HOH B 60 460 125 HOH HOH . N 7 HOH B 61 461 70 HOH HOH . N 7 HOH B 62 462 29 HOH HOH . N 7 HOH B 63 463 196 HOH HOH . N 7 HOH B 64 464 14 HOH HOH . N 7 HOH B 65 465 13 HOH HOH . N 7 HOH B 66 466 30 HOH HOH . N 7 HOH B 67 467 46 HOH HOH . N 7 HOH B 68 468 73 HOH HOH . N 7 HOH B 69 469 33 HOH HOH . N 7 HOH B 70 470 179 HOH HOH . N 7 HOH B 71 471 45 HOH HOH . N 7 HOH B 72 472 83 HOH HOH . N 7 HOH B 73 473 51 HOH HOH . N 7 HOH B 74 474 221 HOH HOH . N 7 HOH B 75 475 213 HOH HOH . N 7 HOH B 76 476 21 HOH HOH . N 7 HOH B 77 477 240 HOH HOH . N 7 HOH B 78 478 112 HOH HOH . N 7 HOH B 79 479 67 HOH HOH . N 7 HOH B 80 480 42 HOH HOH . N 7 HOH B 81 481 258 HOH HOH . N 7 HOH B 82 482 224 HOH HOH . N 7 HOH B 83 483 59 HOH HOH . N 7 HOH B 84 484 129 HOH HOH . N 7 HOH B 85 485 107 HOH HOH . N 7 HOH B 86 486 10 HOH HOH . N 7 HOH B 87 487 212 HOH HOH . N 7 HOH B 88 488 147 HOH HOH . N 7 HOH B 89 489 89 HOH HOH . N 7 HOH B 90 490 150 HOH HOH . N 7 HOH B 91 491 246 HOH HOH . N 7 HOH B 92 492 259 HOH HOH . N 7 HOH B 93 493 24 HOH HOH . N 7 HOH B 94 494 257 HOH HOH . N 7 HOH B 95 495 139 HOH HOH . N 7 HOH B 96 496 122 HOH HOH . N 7 HOH B 97 497 138 HOH HOH . N 7 HOH B 98 498 25 HOH HOH . N 7 HOH B 99 499 140 HOH HOH . N 7 HOH B 100 500 137 HOH HOH . N 7 HOH B 101 501 256 HOH HOH . N 7 HOH B 102 502 232 HOH HOH . N 7 HOH B 103 503 81 HOH HOH . N 7 HOH B 104 504 238 HOH HOH . N 7 HOH B 105 505 118 HOH HOH . N 7 HOH B 106 506 177 HOH HOH . N 7 HOH B 107 507 204 HOH HOH . N 7 HOH B 108 508 225 HOH HOH . N 7 HOH B 109 509 124 HOH HOH . N 7 HOH B 110 510 78 HOH HOH . N 7 HOH B 111 511 176 HOH HOH . N 7 HOH B 112 512 189 HOH HOH . N 7 HOH B 113 513 180 HOH HOH . N 7 HOH B 114 514 53 HOH HOH . N 7 HOH B 115 515 65 HOH HOH . N 7 HOH B 116 516 171 HOH HOH . N 7 HOH B 117 517 227 HOH HOH . N 7 HOH B 118 518 226 HOH HOH . N 7 HOH B 119 519 206 HOH HOH . N 7 HOH B 120 520 216 HOH HOH . N 7 HOH B 121 521 255 HOH HOH . N 7 HOH B 122 522 230 HOH HOH . N 7 HOH B 123 523 169 HOH HOH . N 7 HOH B 124 524 172 HOH HOH . N 7 HOH B 125 525 145 HOH HOH . N 7 HOH B 126 526 146 HOH HOH . N 7 HOH B 127 527 217 HOH HOH . N 7 HOH B 128 528 223 HOH HOH . N 7 HOH B 129 529 210 HOH HOH . N 7 HOH B 130 530 241 HOH HOH . N 7 HOH B 131 531 211 HOH HOH . N 7 HOH B 132 532 229 HOH HOH . N 7 HOH B 133 533 116 HOH HOH . N 7 HOH B 134 534 141 HOH HOH . N 7 HOH B 135 535 168 HOH HOH . N 7 HOH B 136 536 175 HOH HOH . N 7 HOH B 137 537 222 HOH HOH . N 7 HOH B 138 538 181 HOH HOH . N 7 HOH B 139 539 247 HOH HOH . N 7 HOH B 140 540 128 HOH HOH . N 7 HOH B 141 541 195 HOH HOH . N 7 HOH B 142 542 245 HOH HOH . N 7 HOH B 143 543 243 HOH HOH . N 7 HOH B 144 544 248 HOH HOH . N 7 HOH B 145 545 233 HOH HOH . N 7 HOH B 146 546 214 HOH HOH . N 7 HOH B 147 547 231 HOH HOH . N 7 HOH B 148 548 135 HOH HOH . N 7 HOH B 149 549 182 HOH HOH . N 7 HOH B 150 550 244 HOH HOH . N 7 HOH B 151 551 215 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id L _atom_site.label_entity_id 5 _atom_site.Cartn_x -14.494 _atom_site.Cartn_y 25.697 _atom_site.Cartn_z 0.206 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 51.13 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 306 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 336 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #