data_6UDM
#
_model_server_result.job_id            Wq2PMvksT5gsOUymrKJRew 
_model_server_result.datetime_utc      '2024-10-17 01:48:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6udm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":602}' 
#
_entry.id    6UDM 
#
_exptl.entry_id    6UDM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              368.789 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '[(8S)-8-(chloromethyl)-7,8-dihydro-6H-furo[3,2-e]indol-6-yl](5-fluoro-1H-indol-2-yl)methanone' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6UDM 
_cell.length_a            241.281 
_cell.length_b            241.281 
_cell.length_c            125.298 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6UDM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,G 1 1 
B,H,I 2 1 
C,J,K 3 1 
D,L,M 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 I N N 
? 3 K N N 
? 3 M N N 
#
_struct_conn.conn_type_id                   metalc 
_struct_conn.details                        ? 
_struct_conn.id                             metalc1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             430 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              457 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            E 
_struct_conn.ptnr2_label_atom_id            FE 
_struct_conn.ptnr2_label_comp_id            HEM 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             HEM 
_struct_conn.ptnr2_auth_seq_id              601 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.67 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C20 H14 Cl F N2 O2' 
_chem_comp.formula_weight    368.789 
_chem_comp.id                Q4P 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '[(8S)-8-(chloromethyl)-7,8-dihydro-6H-furo[3,2-e]indol-6-yl](5-fluoro-1H-indol-2-yl)methanone' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O24 C25 Q4P sing 460 n y 
O24 C21 Q4P sing 461 n y 
C25 C26 Q4P doub 462 n y 
C21 C22 Q4P doub 463 n y 
C21 C20 Q4P sing 464 n y 
C22 C23 Q4P sing 465 n y 
C26 C20 Q4P sing 466 n y 
C20 C19 Q4P doub 467 n y 
C23 C18 Q4P doub 468 n y 
C19 C18 Q4P sing 469 n y 
C19 C03 Q4P sing 470 n n 
C18 N05 Q4P sing 471 n n 
C02 C03 Q4P sing 472 n n 
C02 CL1 Q4P sing 473 n n 
O17 C06 Q4P doub 474 n n 
C03 C04 Q4P sing 475 n n 
N05 C06 Q4P sing 476 n n 
N05 C04 Q4P sing 477 n n 
C06 C07 Q4P sing 478 n n 
C07 N16 Q4P sing 479 n y 
C07 C08 Q4P doub 480 n y 
N16 C10 Q4P sing 481 n y 
C08 C09 Q4P sing 482 n y 
C10 C09 Q4P doub 483 n y 
C10 C11 Q4P sing 484 n y 
C09 C15 Q4P sing 485 n y 
C11 C12 Q4P doub 486 n y 
C15 C13 Q4P doub 487 n y 
C12 C13 Q4P sing 488 n y 
C13 F14 Q4P sing 489 n n 
C15 H151 Q4P sing 490 n n 
C22 H221 Q4P sing 491 n n 
C26 H261 Q4P sing 492 n n 
C02 H021 Q4P sing 493 n n 
C02 H022 Q4P sing 494 n n 
C03 H031 Q4P sing 495 n n 
C04 H042 Q4P sing 496 n n 
C04 H041 Q4P sing 497 n n 
C08 H081 Q4P sing 498 n n 
C11 H111 Q4P sing 499 n n 
C12 H121 Q4P sing 500 n n 
C23 H231 Q4P sing 501 n n 
C25 H251 Q4P sing 502 n n 
N16 H161 Q4P sing 503 n n 
#
_atom_sites.entry_id                     6UDM 
_atom_sites.fract_transf_matrix[1][1]    0.004145 
_atom_sites.fract_transf_matrix[1][2]    0.002393 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.004786 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007981 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 HEM A 1 601 601 HEM HEM . 
F 3 Q4P A 1 602 1 Q4P LIG . 
G 4 CPS A 1 603 1 CPS CPS . 
H 2 HEM B 1 601 601 HEM HEM . 
I 3 Q4P B 1 602 2 Q4P LIG . 
J 2 HEM C 1 601 601 HEM HEM . 
K 3 Q4P C 1 602 3 Q4P LIG . 
L 2 HEM D 1 601 601 HEM HEM . 
M 3 Q4P D 1 602 4 Q4P LIG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 Q4P . . . F 3 -62.879 -68.441 11.388 1 70.41 ? C10 Q4P 602 A 1 
HETATM 2 C C13 Q4P . . . F 3 -64.825 -68.412 13.282 1 68.62 ? C13 Q4P 602 A 1 
HETATM 3 C C15 Q4P . . . F 3 -64.534 -69.623 12.717 1 69.39 ? C15 Q4P 602 A 1 
HETATM 4 C C20 Q4P . . . F 3 -58.976 -74.868 6.981 1 87.25 ? C20 Q4P 602 A 1 
HETATM 5 C C21 Q4P . . . F 3 -57.943 -74.224 6.238 1 87.23 ? C21 Q4P 602 A 1 
HETATM 6 C C22 Q4P . . . F 3 -57.801 -72.82 6.259 1 84.13 ? C22 Q4P 602 A 1 
HETATM 7 C C26 Q4P . . . F 3 -58.767 -76.301 6.685 1 90.86 ? C26 Q4P 602 A 1 
HETATM 8 C C02 Q4P . . . F 3 -62.221 -75.188 7.921 1 86.03 ? C02 Q4P 602 A 1 
HETATM 9 C C03 Q4P . . . F 3 -61.067 -74.486 8.63 1 82.5 ? C03 Q4P 602 A 1 
HETATM 10 C C04 Q4P . . . F 3 -61.576 -73.153 9.304 1 80.11 ? C04 Q4P 602 A 1 
HETATM 11 C C06 Q4P . . . F 3 -60.933 -70.622 9.02 1 75.96 ? C06 Q4P 602 A 1 
HETATM 12 C C07 Q4P . . . F 3 -61.922 -70.079 10.043 1 72.59 ? C07 Q4P 602 A 1 
HETATM 13 C C08 Q4P . . . F 3 -62.886 -70.68 10.872 1 71.82 ? C08 Q4P 602 A 1 
HETATM 14 C C09 Q4P . . . F 3 -63.512 -69.658 11.717 1 70.37 ? C09 Q4P 602 A 1 
HETATM 15 C C11 Q4P . . . F 3 -63.227 -67.203 12.015 1 69.26 ? C11 Q4P 602 A 1 
HETATM 16 C C12 Q4P . . . F 3 -64.221 -67.182 12.983 1 68.27 ? C12 Q4P 602 A 1 
HETATM 17 C C18 Q4P . . . F 3 -59.789 -72.664 7.783 1 81.49 ? C18 Q4P 602 A 1 
HETATM 18 C C19 Q4P . . . F 3 -59.883 -74.086 7.763 1 83.6 ? C19 Q4P 602 A 1 
HETATM 19 C C23 Q4P . . . F 3 -58.712 -72.083 7.035 1 81.81 ? C23 Q4P 602 A 1 
HETATM 20 C C25 Q4P . . . F 3 -57.681 -76.411 5.835 1 92.38 ? C25 Q4P 602 A 1 
HETATM 21 F F14 Q4P . . . F 3 -65.832 -68.363 14.265 1 71.38 ? F14 Q4P 602 A 1 
HETATM 22 N N05 Q4P . . . F 3 -60.758 -72.023 8.668 1 78.57 ? N05 Q4P 602 A 1 
HETATM 23 N N16 Q4P . . . F 3 -61.923 -68.717 10.397 1 71.7 ? N16 Q4P 602 A 1 
HETATM 24 O O17 Q4P . . . F 3 -60.192 -69.802 8.473 1 77.06 ? O17 Q4P 602 A 1 
HETATM 25 O O24 Q4P . . . F 3 -57.173 -75.154 5.554 1 90.09 ? O24 Q4P 602 A 1 
HETATM 26 CL CL1 Q4P . . . F 3 -63.184 -76.14 9.158 1 96.1 ? CL1 Q4P 602 A 1 
HETATM 27 H H151 Q4P . . . F 3 -64.978 -70.403 12.962 1 69.39 ? H151 Q4P 602 A 1 
HETATM 28 H H221 Q4P . . . F 3 -57.141 -72.363 5.789 1 84.13 ? H221 Q4P 602 A 1 
HETATM 29 H H261 Q4P . . . F 3 -59.245 -77.039 6.987 1 90.86 ? H261 Q4P 602 A 1 
HETATM 30 H H021 Q4P . . . F 3 -61.974 -75.838 7.244 1 86.03 ? H021 Q4P 602 A 1 
HETATM 31 H H022 Q4P . . . F 3 -62.861 -74.605 7.497 1 86.03 ? H022 Q4P 602 A 1 
HETATM 32 H H031 Q4P . . . F 3 -60.765 -75.081 9.332 1 82.5 ? H031 Q4P 602 A 1 
HETATM 33 H H042 Q4P . . . F 3 -61.531 -73.238 10.266 1 80.11 ? H042 Q4P 602 A 1 
HETATM 34 H H041 Q4P . . . F 3 -62.532 -73.055 9.172 1 80.11 ? H041 Q4P 602 A 1 
HETATM 35 H H081 Q4P . . . F 3 -63.112 -71.582 10.879 1 71.82 ? H081 Q4P 602 A 1 
HETATM 36 H H111 Q4P . . . F 3 -62.8 -66.409 11.786 1 69.26 ? H111 Q4P 602 A 1 
HETATM 37 H H121 Q4P . . . F 3 -64.478 -66.399 13.413 1 68.27 ? H121 Q4P 602 A 1 
HETATM 38 H H231 Q4P . . . F 3 -58.577 -71.163 7.018 1 81.81 ? H231 Q4P 602 A 1 
HETATM 39 H H251 Q4P . . . F 3 -57.279 -77.147 5.451 1 92.38 ? H251 Q4P 602 A 1 
HETATM 40 H H161 Q4P . . . F 3 -61.39 -68.163 10.011 1 71.7 ? H161 Q4P 602 A 1 
#
_model_server_stats.io_time_ms              97 
_model_server_stats.parse_time_ms           26 
_model_server_stats.create_model_time_ms    128 
_model_server_stats.query_time_ms           265 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           40 
#