data_6UDM # _model_server_result.job_id '_jeug-f-V0hqYADxcFLlOA' _model_server_result.datetime_utc '2024-10-17 01:51:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6udm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":602}' # _entry.id 6UDM # _exptl.entry_id 6UDM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 368.789 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[(8S)-8-(chloromethyl)-7,8-dihydro-6H-furo[3,2-e]indol-6-yl](5-fluoro-1H-indol-2-yl)methanone' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6UDM _cell.length_a 241.281 _cell.length_b 241.281 _cell.length_c 125.298 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6UDM _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,G 1 1 B,H,I 2 1 C,J,K 3 1 D,L,M 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 I N N ? 3 K N N ? 3 M N N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 430 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 457 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id E _struct_conn.ptnr2_label_atom_id FE _struct_conn.ptnr2_label_comp_id HEM _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id HEM _struct_conn.ptnr2_auth_seq_id 601 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.67 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C20 H14 Cl F N2 O2' _chem_comp.formula_weight 368.789 _chem_comp.id Q4P _chem_comp.mon_nstd_flag . _chem_comp.name '[(8S)-8-(chloromethyl)-7,8-dihydro-6H-furo[3,2-e]indol-6-yl](5-fluoro-1H-indol-2-yl)methanone' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O24 C25 Q4P sing 460 n y O24 C21 Q4P sing 461 n y C25 C26 Q4P doub 462 n y C21 C22 Q4P doub 463 n y C21 C20 Q4P sing 464 n y C22 C23 Q4P sing 465 n y C26 C20 Q4P sing 466 n y C20 C19 Q4P doub 467 n y C23 C18 Q4P doub 468 n y C19 C18 Q4P sing 469 n y C19 C03 Q4P sing 470 n n C18 N05 Q4P sing 471 n n C02 C03 Q4P sing 472 n n C02 CL1 Q4P sing 473 n n O17 C06 Q4P doub 474 n n C03 C04 Q4P sing 475 n n N05 C06 Q4P sing 476 n n N05 C04 Q4P sing 477 n n C06 C07 Q4P sing 478 n n C07 N16 Q4P sing 479 n y C07 C08 Q4P doub 480 n y N16 C10 Q4P sing 481 n y C08 C09 Q4P sing 482 n y C10 C09 Q4P doub 483 n y C10 C11 Q4P sing 484 n y C09 C15 Q4P sing 485 n y C11 C12 Q4P doub 486 n y C15 C13 Q4P doub 487 n y C12 C13 Q4P sing 488 n y C13 F14 Q4P sing 489 n n C15 H151 Q4P sing 490 n n C22 H221 Q4P sing 491 n n C26 H261 Q4P sing 492 n n C02 H021 Q4P sing 493 n n C02 H022 Q4P sing 494 n n C03 H031 Q4P sing 495 n n C04 H042 Q4P sing 496 n n C04 H041 Q4P sing 497 n n C08 H081 Q4P sing 498 n n C11 H111 Q4P sing 499 n n C12 H121 Q4P sing 500 n n C23 H231 Q4P sing 501 n n C25 H251 Q4P sing 502 n n N16 H161 Q4P sing 503 n n # _atom_sites.entry_id 6UDM _atom_sites.fract_transf_matrix[1][1] 0.004145 _atom_sites.fract_transf_matrix[1][2] 0.002393 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004786 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007981 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 HEM A 1 601 601 HEM HEM . F 3 Q4P A 1 602 1 Q4P LIG . G 4 CPS A 1 603 1 CPS CPS . H 2 HEM B 1 601 601 HEM HEM . I 3 Q4P B 1 602 2 Q4P LIG . J 2 HEM C 1 601 601 HEM HEM . K 3 Q4P C 1 602 3 Q4P LIG . L 2 HEM D 1 601 601 HEM HEM . M 3 Q4P D 1 602 4 Q4P LIG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 Q4P . . . I 3 -26.076 -91.273 53.316 1 69.66 ? C10 Q4P 602 B 1 HETATM 2 C C13 Q4P . . . I 3 -25.232 -92.983 51.393 1 71.7 ? C13 Q4P 602 B 1 HETATM 3 C C15 Q4P . . . I 3 -26.398 -93.302 52.031 1 70.66 ? C15 Q4P 602 B 1 HETATM 4 C C20 Q4P . . . I 3 -33.122 -90.62 58.412 1 80.86 ? C20 Q4P 602 B 1 HETATM 5 C C21 Q4P . . . I 3 -32.879 -89.396 59.113 1 80.54 ? C21 Q4P 602 B 1 HETATM 6 C C22 Q4P . . . I 3 -31.672 -88.688 58.94 1 77.07 ? C22 Q4P 602 B 1 HETATM 7 C C26 Q4P . . . I 3 -34.471 -91.012 58.877 1 84.91 ? C26 Q4P 602 B 1 HETATM 8 C C02 Q4P . . . I 3 -32.366 -93.746 57.352 1 83.54 ? C02 Q4P 602 B 1 HETATM 9 C C03 Q4P . . . I 3 -32.098 -92.403 56.649 1 79.56 ? C03 Q4P 602 B 1 HETATM 10 C C04 Q4P . . . I 3 -30.664 -92.397 55.942 1 75.36 ? C04 Q4P 602 B 1 HETATM 11 C C06 Q4P . . . I 3 -28.745 -90.572 55.831 1 72.43 ? C06 Q4P 602 B 1 HETATM 12 C C07 Q4P . . . I 3 -27.886 -91.203 54.765 1 70.19 ? C07 Q4P 602 B 1 HETATM 13 C C08 Q4P . . . I 3 -28.004 -92.349 53.962 1 69.14 ? C08 Q4P 602 B 1 HETATM 14 C C09 Q4P . . . I 3 -26.859 -92.416 53.048 1 69.33 ? C09 Q4P 602 B 1 HETATM 15 C C11 Q4P . . . I 3 -24.862 -90.989 52.613 1 70.4 ? C11 Q4P 602 B 1 HETATM 16 C C12 Q4P . . . I 3 -24.425 -91.859 51.629 1 71.02 ? C12 Q4P 602 B 1 HETATM 17 C C18 Q4P . . . I 3 -30.891 -90.458 57.343 1 76.29 ? C18 Q4P 602 B 1 HETATM 18 C C19 Q4P . . . I 3 -32.129 -91.141 57.519 1 78.34 ? C19 Q4P 602 B 1 HETATM 19 C C23 Q4P . . . I 3 -30.724 -89.228 58.06 1 75.75 ? C23 Q4P 602 B 1 HETATM 20 C C25 Q4P . . . I 3 -34.919 -90.051 59.771 1 85.9 ? C25 Q4P 602 B 1 HETATM 21 F F14 Q4P . . . I 3 -24.771 -93.856 50.389 1 77.21 ? F14 Q4P 602 B 1 HETATM 22 N N05 Q4P . . . I 3 -29.998 -91.08 56.375 1 74.24 ? N05 Q4P 602 B 1 HETATM 23 N N16 Q4P . . . I 3 -26.715 -90.559 54.334 1 69.26 ? N16 Q4P 602 B 1 HETATM 24 O O17 Q4P . . . I 3 -28.357 -89.483 56.258 1 72.71 ? O17 Q4P 602 B 1 HETATM 25 O O24 Q4P . . . I 3 -33.957 -89.063 59.923 1 82.47 ? O24 Q4P 602 B 1 HETATM 26 CL CL1 Q4P . . . I 3 -33.494 -94.781 56.297 1 96.27 ? CL1 Q4P 602 B 1 HETATM 27 H H151 Q4P . . . I 3 -26.881 -94.069 51.823 1 70.66 ? H151 Q4P 602 B 1 HETATM 28 H H221 Q4P . . . I 3 -31.476 -87.891 59.377 1 77.07 ? H221 Q4P 602 B 1 HETATM 29 H H261 Q4P . . . I 3 -34.978 -91.757 58.645 1 84.91 ? H261 Q4P 602 B 1 HETATM 30 H H021 Q4P . . . I 3 -32.813 -93.692 58.211 1 83.54 ? H021 Q4P 602 B 1 HETATM 31 H H022 Q4P . . . I 3 -31.583 -94.297 57.506 1 83.54 ? H022 Q4P 602 B 1 HETATM 32 H H031 Q4P . . . I 3 -32.768 -92.322 55.953 1 79.56 ? H031 Q4P 602 B 1 HETATM 33 H H042 Q4P . . . I 3 -30.192 -93.217 56.154 1 75.36 ? H042 Q4P 602 B 1 HETATM 34 H H041 Q4P . . . I 3 -30.762 -92.482 54.983 1 75.36 ? H041 Q4P 602 B 1 HETATM 35 H H081 Q4P . . . I 3 -28.687 -92.979 54.004 1 69.14 ? H081 Q4P 602 B 1 HETATM 36 H H111 Q4P . . . I 3 -24.359 -90.23 52.804 1 70.4 ? H111 Q4P 602 B 1 HETATM 37 H H121 Q4P . . . I 3 -23.642 -91.713 51.149 1 71.02 ? H121 Q4P 602 B 1 HETATM 38 H H231 Q4P . . . I 3 -29.946 -88.726 57.979 1 75.75 ? H231 Q4P 602 B 1 HETATM 39 H H251 Q4P . . . I 3 -35.708 -89.982 60.248 1 85.9 ? H251 Q4P 602 B 1 HETATM 40 H H161 Q4P . . . I 3 -26.462 -89.822 54.697 1 69.26 ? H161 Q4P 602 B 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 46 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 40 #