data_6UDZ # _model_server_result.job_id '_A0ZJZeWATW3cI0D7kSG2w' _model_server_result.datetime_utc '2024-11-22 08:28:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6udz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":101}' # _entry.id 6UDZ # _exptl.entry_id 6UDZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 114.023 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'trifluoroacetic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 100.45 _cell.angle_beta 101.68 _cell.angle_gamma 110.55 _cell.entry_id 6UDZ _cell.length_a 10.85 _cell.length_b 15.02 _cell.length_c 21.62 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6UDZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 2 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P -1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLU 1 A GLU 1 1_555 A N DPR 2 A DPR 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A C DPR 2 A DPR 2 1_555 A N DPR 3 A DPR 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? covale ? covale3 A C DPR 3 A DPR 3 1_555 A N LYS 4 A LYS 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale4 A C LYS 4 A LYS 4 1_555 A N DVA 5 A DVA 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale5 A C DVA 5 A DVA 5 1_555 A N DGL 6 A DGL 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale6 A C DGL 6 A DGL 6 1_555 A N PRO 7 A PRO 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.349 ? covale ? covale7 A C PRO 8 A PRO 8 1_555 A N DLY 9 A DLY 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale8 A C DLY 9 A DLY 9 1_555 A N VAL 10 A VAL 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C2 H F3 O2' _chem_comp.formula_weight 114.023 _chem_comp.id TFA _chem_comp.mon_nstd_flag . _chem_comp.name 'trifluoroacetic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 TFA sing 138 n n C1 O TFA doub 139 n n C1 OXT TFA sing 140 n n C2 F1 TFA sing 141 n n C2 F2 TFA sing 142 n n C2 F3 TFA sing 143 n n OXT HXT TFA sing 144 n n # _atom_sites.entry_id 6UDZ _atom_sites.fract_transf_matrix[1][1] 0.092166 _atom_sites.fract_transf_matrix[1][2] 0.034544 _atom_sites.fract_transf_matrix[1][3] 0.0297 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.071101 _atom_sites.fract_transf_matrix[2][3] 0.020353 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.049128 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TFA A 1 101 101 TFA TFA . C 2 TFA A 1 102 102 TFA TFA . D 3 HOH A 1 201 201 HOH HOH . D 3 HOH A 2 202 202 HOH HOH . D 3 HOH A 3 203 203 HOH HOH . D 3 HOH A 4 204 204 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 TFA . . . B 2 -11.159 -0.473 0.466 0.5 5.14 ? C1 TFA 101 A 1 HETATM 2 C C2 TFA . . . B 2 -11.562 -0.469 -1.005 0.5 5.87 ? C2 TFA 101 A 1 HETATM 3 O O TFA . . . B 2 -10.25 0.274 0.728 0.5 5.01 ? O TFA 101 A 1 HETATM 4 F F1 TFA . . . B 2 -10.895 -1.361 -1.699 0.5 6.37 ? F1 TFA 101 A 1 HETATM 5 F F2 TFA . . . B 2 -12.822 -0.774 -1.192 0.5 5.96 ? F2 TFA 101 A 1 HETATM 6 F F3 TFA . . . B 2 -11.389 0.711 -1.546 0.5 6.51 ? F3 TFA 101 A 1 HETATM 7 O OXT TFA . . . B 2 -11.774 -1.282 1.211 0.5 5.47 ? OXT TFA 101 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 7 #