data_6UFX # _model_server_result.job_id 12qszs8Mj_nnfFrNjHMZZQ _model_server_result.datetime_utc '2024-11-05 08:41:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ufx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 6UFX # _exptl.entry_id 6UFX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 488.553 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "N-[(3,5-dimethoxyphenyl)methyl]-4'-fluoro-5-{[(2E)-2-imino-3-methyl-2,3-dihydro-1H-imidazol-1-yl]methyl}-2'-methyl[1,1'-biphenyl]-3-carboxamide" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6UFX _cell.length_a 78.625 _cell.length_b 98.896 _cell.length_c 80.546 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6UFX _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C28 H29 F N4 O3' _chem_comp.formula_weight 488.553 _chem_comp.id Q6S _chem_comp.mon_nstd_flag . _chem_comp.name "N-[(3,5-dimethoxyphenyl)methyl]-4'-fluoro-5-{[(2E)-2-imino-3-methyl-2,3-dihydro-1H-imidazol-1-yl]methyl}-2'-methyl[1,1'-biphenyl]-3-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F1 C21 Q6S sing 258 n n C20 C21 Q6S doub 259 n y C20 C19 Q6S sing 260 n y C24 C19 Q6S sing 261 n n C21 C22 Q6S sing 262 n y C19 C18 Q6S doub 263 n y C18 C23 Q6S sing 264 n y C18 C15 Q6S sing 265 n n C22 C23 Q6S doub 266 n y C15 C14 Q6S doub 267 n y C15 C16 Q6S sing 268 n y C14 C13 Q6S sing 269 n y C16 C11 Q6S doub 270 n y C13 C17 Q6S sing 271 n n C13 C12 Q6S doub 272 n y C17 N2 Q6S sing 273 n n C11 C12 Q6S sing 274 n y C11 C10 Q6S sing 275 n n C27 N2 Q6S sing 276 n n C27 C26 Q6S doub 277 n n N2 C25 Q6S sing 278 n n C10 O3 Q6S doub 279 n n C10 N1 Q6S sing 280 n n C26 N3 Q6S sing 281 n n N1 C9 Q6S sing 282 n n C25 N4 Q6S doub 283 n n C25 N3 Q6S sing 284 n n N3 C28 Q6S sing 285 n n C9 C5 Q6S sing 286 n n C5 C4 Q6S doub 287 n y C5 C6 Q6S sing 288 n y C4 C3 Q6S sing 289 n y C6 C1 Q6S doub 290 n y C3 O2 Q6S sing 291 n n C3 C2 Q6S doub 292 n y C1 C2 Q6S sing 293 n y C1 O1 Q6S sing 294 n n C7 O1 Q6S sing 295 n n O2 C8 Q6S sing 296 n n N1 H1 Q6S sing 297 n n C4 H2 Q6S sing 298 n n C6 H3 Q6S sing 299 n n C7 H4 Q6S sing 300 n n C7 H5 Q6S sing 301 n n C7 H6 Q6S sing 302 n n C8 H7 Q6S sing 303 n n C8 H8 Q6S sing 304 n n C8 H9 Q6S sing 305 n n C17 H10 Q6S sing 306 n n C17 H11 Q6S sing 307 n n C20 H12 Q6S sing 308 n n C22 H13 Q6S sing 309 n n C24 H14 Q6S sing 310 n n C24 H15 Q6S sing 311 n n C24 H16 Q6S sing 312 n n C26 H17 Q6S sing 313 n n C28 H18 Q6S sing 314 n n C28 H19 Q6S sing 315 n n C28 H20 Q6S sing 316 n n C12 H21 Q6S sing 317 n n C14 H22 Q6S sing 318 n n C16 H23 Q6S sing 319 n n C2 H24 Q6S sing 320 n n C23 H25 Q6S sing 321 n n C27 H26 Q6S sing 322 n n C9 H27 Q6S sing 323 n n C9 H28 Q6S sing 324 n n N4 H29 Q6S sing 325 n n # _atom_sites.entry_id 6UFX _atom_sites.fract_transf_matrix[1][1] 0.012719 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010112 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012415 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 Q6S A 1 401 401 Q6S LIG . C 3 HOH A 1 501 73 HOH HOH . C 3 HOH A 2 502 8 HOH HOH . C 3 HOH A 3 503 148 HOH HOH . C 3 HOH A 4 504 86 HOH HOH . C 3 HOH A 5 505 1 HOH HOH . C 3 HOH A 6 506 126 HOH HOH . C 3 HOH A 7 507 92 HOH HOH . C 3 HOH A 8 508 68 HOH HOH . C 3 HOH A 9 509 66 HOH HOH . C 3 HOH A 10 510 49 HOH HOH . C 3 HOH A 11 511 3 HOH HOH . C 3 HOH A 12 512 90 HOH HOH . C 3 HOH A 13 513 38 HOH HOH . C 3 HOH A 14 514 75 HOH HOH . C 3 HOH A 15 515 35 HOH HOH . C 3 HOH A 16 516 14 HOH HOH . C 3 HOH A 17 517 20 HOH HOH . C 3 HOH A 18 518 95 HOH HOH . C 3 HOH A 19 519 16 HOH HOH . C 3 HOH A 20 520 21 HOH HOH . C 3 HOH A 21 521 53 HOH HOH . C 3 HOH A 22 522 2 HOH HOH . C 3 HOH A 23 523 18 HOH HOH . C 3 HOH A 24 524 9 HOH HOH . C 3 HOH A 25 525 44 HOH HOH . C 3 HOH A 26 526 77 HOH HOH . C 3 HOH A 27 527 37 HOH HOH . C 3 HOH A 28 528 82 HOH HOH . C 3 HOH A 29 529 58 HOH HOH . C 3 HOH A 30 530 28 HOH HOH . C 3 HOH A 31 531 52 HOH HOH . C 3 HOH A 32 532 32 HOH HOH . C 3 HOH A 33 533 55 HOH HOH . C 3 HOH A 34 534 24 HOH HOH . C 3 HOH A 35 535 15 HOH HOH . C 3 HOH A 36 536 30 HOH HOH . C 3 HOH A 37 537 96 HOH HOH . C 3 HOH A 38 538 6 HOH HOH . C 3 HOH A 39 539 121 HOH HOH . C 3 HOH A 40 540 7 HOH HOH . C 3 HOH A 41 541 99 HOH HOH . C 3 HOH A 42 542 65 HOH HOH . C 3 HOH A 43 543 5 HOH HOH . C 3 HOH A 44 544 48 HOH HOH . C 3 HOH A 45 545 39 HOH HOH . C 3 HOH A 46 546 46 HOH HOH . C 3 HOH A 47 547 97 HOH HOH . C 3 HOH A 48 548 62 HOH HOH . C 3 HOH A 49 549 137 HOH HOH . C 3 HOH A 50 550 40 HOH HOH . C 3 HOH A 51 551 47 HOH HOH . C 3 HOH A 52 552 76 HOH HOH . C 3 HOH A 53 553 69 HOH HOH . C 3 HOH A 54 554 120 HOH HOH . C 3 HOH A 55 555 57 HOH HOH . C 3 HOH A 56 556 85 HOH HOH . C 3 HOH A 57 557 105 HOH HOH . C 3 HOH A 58 558 74 HOH HOH . C 3 HOH A 59 559 111 HOH HOH . C 3 HOH A 60 560 51 HOH HOH . C 3 HOH A 61 561 34 HOH HOH . C 3 HOH A 62 562 142 HOH HOH . C 3 HOH A 63 563 43 HOH HOH . C 3 HOH A 64 564 19 HOH HOH . C 3 HOH A 65 565 41 HOH HOH . C 3 HOH A 66 566 132 HOH HOH . C 3 HOH A 67 567 45 HOH HOH . C 3 HOH A 68 568 72 HOH HOH . C 3 HOH A 69 569 149 HOH HOH . C 3 HOH A 70 570 26 HOH HOH . C 3 HOH A 71 571 140 HOH HOH . C 3 HOH A 72 572 108 HOH HOH . C 3 HOH A 73 573 22 HOH HOH . C 3 HOH A 74 574 50 HOH HOH . C 3 HOH A 75 575 31 HOH HOH . C 3 HOH A 76 576 33 HOH HOH . C 3 HOH A 77 577 67 HOH HOH . C 3 HOH A 78 578 23 HOH HOH . C 3 HOH A 79 579 71 HOH HOH . C 3 HOH A 80 580 13 HOH HOH . C 3 HOH A 81 581 12 HOH HOH . C 3 HOH A 82 582 27 HOH HOH . C 3 HOH A 83 583 64 HOH HOH . C 3 HOH A 84 584 78 HOH HOH . C 3 HOH A 85 585 56 HOH HOH . C 3 HOH A 86 586 109 HOH HOH . C 3 HOH A 87 587 110 HOH HOH . C 3 HOH A 88 588 10 HOH HOH . C 3 HOH A 89 589 147 HOH HOH . C 3 HOH A 90 590 25 HOH HOH . C 3 HOH A 91 591 160 HOH HOH . C 3 HOH A 92 592 59 HOH HOH . C 3 HOH A 93 593 123 HOH HOH . C 3 HOH A 94 594 164 HOH HOH . C 3 HOH A 95 595 63 HOH HOH . C 3 HOH A 96 596 93 HOH HOH . C 3 HOH A 97 597 61 HOH HOH . C 3 HOH A 98 598 11 HOH HOH . C 3 HOH A 99 599 166 HOH HOH . C 3 HOH A 100 600 124 HOH HOH . C 3 HOH A 101 601 118 HOH HOH . C 3 HOH A 102 602 152 HOH HOH . C 3 HOH A 103 603 4 HOH HOH . C 3 HOH A 104 604 101 HOH HOH . C 3 HOH A 105 605 145 HOH HOH . C 3 HOH A 106 606 42 HOH HOH . C 3 HOH A 107 607 94 HOH HOH . C 3 HOH A 108 608 131 HOH HOH . C 3 HOH A 109 609 163 HOH HOH . C 3 HOH A 110 610 29 HOH HOH . C 3 HOH A 111 611 81 HOH HOH . C 3 HOH A 112 612 133 HOH HOH . C 3 HOH A 113 613 128 HOH HOH . C 3 HOH A 114 614 17 HOH HOH . C 3 HOH A 115 615 70 HOH HOH . C 3 HOH A 116 616 60 HOH HOH . C 3 HOH A 117 617 130 HOH HOH . C 3 HOH A 118 618 156 HOH HOH . C 3 HOH A 119 619 114 HOH HOH . C 3 HOH A 120 620 88 HOH HOH . C 3 HOH A 121 621 103 HOH HOH . C 3 HOH A 122 622 102 HOH HOH . C 3 HOH A 123 623 80 HOH HOH . C 3 HOH A 124 624 106 HOH HOH . C 3 HOH A 125 625 98 HOH HOH . C 3 HOH A 126 626 36 HOH HOH . C 3 HOH A 127 627 116 HOH HOH . C 3 HOH A 128 628 150 HOH HOH . C 3 HOH A 129 629 139 HOH HOH . C 3 HOH A 130 630 112 HOH HOH . C 3 HOH A 131 631 87 HOH HOH . C 3 HOH A 132 632 146 HOH HOH . C 3 HOH A 133 633 83 HOH HOH . C 3 HOH A 134 634 117 HOH HOH . C 3 HOH A 135 635 141 HOH HOH . C 3 HOH A 136 636 136 HOH HOH . C 3 HOH A 137 637 107 HOH HOH . C 3 HOH A 138 638 138 HOH HOH . C 3 HOH A 139 639 176 HOH HOH . C 3 HOH A 140 640 143 HOH HOH . C 3 HOH A 141 641 153 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 Q6S . . . B 2 -16.761 -28.791 -5.341 1 18.12 ? N1 Q6S 401 A 1 HETATM 2 N N3 Q6S . . . B 2 -16.189 -20.807 -4.638 1 19.79 ? N3 Q6S 401 A 1 HETATM 3 C C4 Q6S . . . B 2 -16.639 -31.061 -2.599 1 46.03 ? C4 Q6S 401 A 1 HETATM 4 C C5 Q6S . . . B 2 -16.844 -29.869 -3.136 1 34.65 ? C5 Q6S 401 A 1 HETATM 5 C C6 Q6S . . . B 2 -16.503 -28.591 -2.351 1 21.85 ? C6 Q6S 401 A 1 HETATM 6 C C7 Q6S . . . B 2 -14.705 -26.739 -0.859 1 26.92 ? C7 Q6S 401 A 1 HETATM 7 C C8 Q6S . . . B 2 -15.968 -32.548 0.77 1 42.74 ? C8 Q6S 401 A 1 HETATM 8 C C10 Q6S . . . B 2 -17.564 -27.679 -5.776 1 19.88 ? C10 Q6S 401 A 1 HETATM 9 C C13 Q6S . . . B 2 -16.881 -24.236 -7.363 1 17.35 ? C13 Q6S 401 A 1 HETATM 10 C C15 Q6S . . . B 2 -15.248 -25.86 -8.215 1 13.98 ? C15 Q6S 401 A 1 HETATM 11 C C17 Q6S . . . B 2 -17.497 -22.849 -7.267 1 11.65 ? C17 Q6S 401 A 1 HETATM 12 C C20 Q6S . . . B 2 -12.796 -26.352 -11.189 1 23.19 ? C20 Q6S 401 A 1 HETATM 13 C C21 Q6S . . . B 2 -11.641 -26.405 -10.551 1 22.41 ? C21 Q6S 401 A 1 HETATM 14 C C22 Q6S . . . B 2 -11.574 -26.287 -9.037 1 21.19 ? C22 Q6S 401 A 1 HETATM 15 C C24 Q6S . . . B 2 -15.426 -26.109 -11.163 1 18.06 ? C24 Q6S 401 A 1 HETATM 16 C C26 Q6S . . . B 2 -14.955 -20.946 -5.415 1 18.72 ? C26 Q6S 401 A 1 HETATM 17 C C28 Q6S . . . B 2 -16.266 -20.025 -3.412 1 15.91 ? C28 Q6S 401 A 1 HETATM 18 C C1 Q6S . . . B 2 -16.005 -28.705 -1.126 1 32.4 ? C1 Q6S 401 A 1 HETATM 19 C C11 Q6S . . . B 2 -16.941 -26.568 -6.609 1 18.67 ? C11 Q6S 401 A 1 HETATM 20 C C12 Q6S . . . B 2 -17.472 -25.37 -6.547 1 15.06 ? C12 Q6S 401 A 1 HETATM 21 C C14 Q6S . . . B 2 -15.839 -24.463 -8.137 1 16.02 ? C14 Q6S 401 A 1 HETATM 22 C C16 Q6S . . . B 2 -15.733 -26.847 -7.497 1 14.64 ? C16 Q6S 401 A 1 HETATM 23 C C18 Q6S . . . B 2 -14.029 -26.066 -9.094 1 17.5 ? C18 Q6S 401 A 1 HETATM 24 C C19 Q6S . . . B 2 -14.094 -26.161 -10.412 1 19.21 ? C19 Q6S 401 A 1 HETATM 25 C C2 Q6S . . . B 2 -15.779 -30.097 -0.512 1 44.99 ? C2 Q6S 401 A 1 HETATM 26 C C23 Q6S . . . B 2 -12.692 -26.121 -8.365 1 18.01 ? C23 Q6S 401 A 1 HETATM 27 C C25 Q6S . . . B 2 -17.279 -21.476 -5.184 1 14.79 ? C25 Q6S 401 A 1 HETATM 28 C C27 Q6S . . . B 2 -15.309 -21.745 -6.505 1 19.31 ? C27 Q6S 401 A 1 HETATM 29 C C3 Q6S . . . B 2 -16.069 -31.197 -1.187 1 44.5 ? C3 Q6S 401 A 1 HETATM 30 C C9 Q6S . . . B 2 -17.411 -29.818 -4.554 1 27.86 ? C9 Q6S 401 A 1 HETATM 31 F F1 Q6S . . . B 2 -10.484 -26.571 -11.249 1 27.41 ? F1 Q6S 401 A 1 HETATM 32 N N2 Q6S . . . B 2 -16.735 -22.051 -6.326 1 15.37 ? N2 Q6S 401 A 1 HETATM 33 N N4 Q6S . . . B 2 -18.623 -21.541 -4.677 1 17.22 ? N4 Q6S 401 A 1 HETATM 34 O O1 Q6S . . . B 2 -15.693 -27.58 -0.344 1 25.18 ? O1 Q6S 401 A 1 HETATM 35 O O2 Q6S . . . B 2 -15.859 -32.471 -0.628 1 46.36 ? O2 Q6S 401 A 1 HETATM 36 O O3 Q6S . . . B 2 -18.712 -27.622 -5.483 1 19.48 ? O3 Q6S 401 A 1 # _model_server_stats.io_time_ms 106 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 36 #