data_6UG6
#
_model_server_result.job_id            AKxFzA2OXIBEX4tZ6Z412A 
_model_server_result.datetime_utc      '2024-11-22 09:19:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6ug6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"S","auth_seq_id":105}' 
#
_entry.id    6UG6 
#
_exptl.entry_id    6UG6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              94.971 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHATE ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         109.499 
_cell.angle_beta          108.863 
_cell.angle_gamma         107.911 
_cell.entry_id            6UG6 
_cell.length_a            28.53 
_cell.length_b            29.96 
_cell.length_c            30.1 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6UG6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        2 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P -1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
PISA monomeric 1 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,U 1 1 
B,G,H,I,J,V 2 1 
C,K,L,M,N,W 3 1 
D,O,P,Q,R,S,T,X 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 J N N 
? 5 S N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A N PRO 1 A PRO 1 1_555 A C ASP 12 A ASP 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 sing 
covale ? covale2 A C ARG 2 A ARG 2 1_555 A N DVA 3 A DVA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale3 A C DVA 3 A DVA 3 1_555 A N ASP 4 A ASP 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale4 A C ARG 6 A ARG 6 1_555 A N DVA 7 A DVA 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale5 A C DVA 7 A DVA 7 1_555 A N ASP 8 A ASP 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale6 A C ARG 10 A ARG 10 1_555 A N DVA 11 A DVA 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale7 A C DVA 11 A DVA 11 1_555 A N ASP 12 A ASP 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? 
covale ? covale8 B N PRO 1 B PRO 1 1_555 B C ASP 12 B ASP 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 sing 
covale ? covale9 B C ARG 2 B ARG 2 1_555 B N DVA 3 B DVA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale10 B C DVA 3 B DVA 3 1_555 B N ASP 4 B ASP 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale11 B C ARG 6 B ARG 6 1_555 B N DVA 7 B DVA 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale12 B C DVA 7 B DVA 7 1_555 B N ASP 8 B ASP 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale13 B C ARG 10 B ARG 10 1_555 B N DVA 11 B DVA 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale14 B C DVA 11 B DVA 11 1_555 B N ASP 12 B ASP 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale15 C N PRO 1 C PRO 1 1_555 C C ASP 12 C ASP 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 sing 
covale ? covale16 C C ARG 2 C ARG 2 1_555 C N DVA 3 C DVA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale17 C C DVA 3 C DVA 3 1_555 C N ASP 4 C ASP 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? 
covale ? covale18 C C ARG 6 C ARG 6 1_555 C N DVA 7 C DVA 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale19 C C DVA 7 C DVA 7 1_555 C N ASP 8 C ASP 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale20 C C ARG 10 C ARG 10 1_555 C N DVA 11 C DVA 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale21 C C DVA 11 C DVA 11 1_555 C N ASP 12 C ASP 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale22 D N PRO 1 D PRO 1 1_555 D C ASP 12 D ASP 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 sing 
covale ? covale23 D C ARG 2 D ARG 2 1_555 D N DVA 3 D DVA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale24 D C DVA 3 D DVA 3 1_555 D N ASP 4 D ASP 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale25 D C ARG 6 D ARG 6 1_555 D N DVA 7 D DVA 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale26 D C DVA 7 D DVA 7 1_555 D N ASP 8 D ASP 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale27 D C ARG 10 D ARG 10 1_555 D N DVA 11 D DVA 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale28 D C DVA 11 D DVA 11 1_555 D N ASP 12 D ASP 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
metalc ? metalc1 A O ASP 8 A ASP 8 1_555 F NA NA . A NA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? 
metalc ? metalc2 F NA NA . A NA 102 1_555 U O HOH . A HOH 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.556 ? 
metalc ? metalc3 F NA NA . A NA 102 1_555 U O HOH . A HOH 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? 
metalc ? metalc4 F NA NA . A NA 102 1_555 U O HOH . A HOH 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.63 ? 
metalc ? metalc5 F NA NA . A NA 102 1_555 W O HOH . C HOH 201 2_666 ? ? ? ? ? ? ? ? ? ? ? ? 2.716 ? 
metalc ? metalc6 F NA NA . A NA 102 1_555 W O HOH . C HOH 210 2_666 ? ? ? ? ? ? ? ? ? ? ? ? 3.097 ? 
metalc ? metalc7 U O HOH . A HOH 212 2_666 N NA NA . C NA 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.066 ? 
metalc ? metalc8 C O ASP 4 C ASP 4 1_555 N NA NA . C NA 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? 
metalc ? metalc9 N NA NA . C NA 104 1_555 W O HOH . C HOH 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.693 ? 
metalc ? metalc10 N NA NA . C NA 104 1_555 W O HOH . C HOH 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.58 ? 
metalc ? metalc11 N NA NA . C NA 104 1_555 W O HOH . C HOH 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? 
metalc ? metalc12 N NA NA . C NA 104 1_555 W O HOH . C HOH 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.661 ? 
#
_chem_comp.formula           'O4 P -3' 
_chem_comp.formula_weight    94.971 
_chem_comp.id                PO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1 PO4 doub 104 n n 
P O2 PO4 sing 105 n n 
P O3 PO4 sing 106 n n 
P O4 PO4 sing 107 n n 
#
_atom_sites.entry_id                     6UG6 
_atom_sites.fract_transf_matrix[1][1]    0.035051 
_atom_sites.fract_transf_matrix[1][2]    0.011329 
_atom_sites.fract_transf_matrix[1][3]    0.019878 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.035078 
_atom_sites.fract_transf_matrix[2][3]    0.019251 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.040048 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 MRD A 1 101 13 MRD MRD . 
F 3 NA A 1 102 14 NA NA . 
G 2 MRD B 1 101 13 MRD MRD . 
H 2 MRD B 1 102 14 MRD MRD . 
I 4 SO4 B 1 103 15 SO4 SO4 . 
J 5 PO4 B 1 104 16 PO4 PO4 . 
K 2 MRD C 1 101 13 MRD MRD . 
L 6 MPD C 1 102 14 MPD MRD . 
M 2 MRD C 1 103 15 MRD MRD . 
N 3 NA C 1 104 17 NA NA . 
O 2 MRD D 1 101 13 MRD MRD . 
P 2 MRD D 1 102 14 MRD MRD . 
Q 2 MRD D 1 103 15 MRD MRD . 
R 6 MPD D 1 104 16 MPD MRD . 
S 5 PO4 D 1 105 17 PO4 PO4 . 
T 6 MPD D 1 106 18 MPD MRD . 
U 7 HOH A 1 201 22 HOH HOH . 
U 7 HOH A 2 202 21 HOH HOH . 
U 7 HOH A 3 203 18 HOH HOH . 
U 7 HOH A 4 204 19 HOH HOH . 
U 7 HOH A 5 205 17 HOH HOH . 
U 7 HOH A 6 206 15 HOH HOH . 
U 7 HOH A 7 207 23 HOH HOH . 
U 7 HOH A 8 208 20 HOH HOH . 
U 7 HOH A 9 209 25 HOH HOH . 
U 7 HOH A 10 210 22 HOH HOH . 
U 7 HOH A 11 211 24 HOH HOH . 
U 7 HOH A 12 212 16 HOH HOH . 
V 7 HOH B 1 201 17 HOH HOH . 
V 7 HOH B 2 202 18 HOH HOH . 
V 7 HOH B 3 203 24 HOH HOH . 
V 7 HOH B 4 204 19 HOH HOH . 
V 7 HOH B 5 205 16 HOH HOH . 
V 7 HOH B 6 206 23 HOH HOH . 
V 7 HOH B 7 207 21 HOH HOH . 
V 7 HOH B 8 208 25 HOH HOH . 
V 7 HOH B 9 209 20 HOH HOH . 
V 7 HOH B 10 210 26 HOH HOH . 
W 7 HOH C 1 201 27 HOH HOH . 
W 7 HOH C 2 202 25 HOH HOH . 
W 7 HOH C 3 203 26 HOH HOH . 
W 7 HOH C 4 204 24 HOH HOH . 
W 7 HOH C 5 205 23 HOH HOH . 
W 7 HOH C 6 206 19 HOH HOH . 
W 7 HOH C 7 207 18 HOH HOH . 
W 7 HOH C 8 208 22 HOH HOH . 
W 7 HOH C 9 209 20 HOH HOH . 
W 7 HOH C 10 210 21 HOH HOH . 
X 7 HOH D 1 201 25 HOH HOH . 
X 7 HOH D 2 202 21 HOH HOH . 
X 7 HOH D 3 203 26 HOH HOH . 
X 7 HOH D 4 204 20 HOH HOH . 
X 7 HOH D 5 205 27 HOH HOH . 
X 7 HOH D 6 206 19 HOH HOH . 
X 7 HOH D 7 207 24 HOH HOH . 
X 7 HOH D 8 208 22 HOH HOH . 
X 7 HOH D 9 209 23 HOH HOH . 
X 7 HOH D 10 210 28 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P PO4 . A . S 5 14.185 -0.25 -12.508 0.5 3.46 ? P PO4 105 D 1 
HETATM 2 P P PO4 . B . S 5 14.434 -0.302 -12.459 0.5 3.82 ? P PO4 105 D 1 
HETATM 3 O O1 PO4 . A . S 5 13.288 0.18 -13.618 0.5 4.65 ? O1 PO4 105 D 1 
HETATM 4 O O1 PO4 . B . S 5 14.379 -1.398 -13.465 0.5 4.26 ? O1 PO4 105 D 1 
HETATM 5 O O2 PO4 . A . S 5 15.553 -0.515 -13.066 0.5 6.5 ? O2 PO4 105 D 1 
HETATM 6 O O2 PO4 . B . S 5 15.318 -0.726 -11.337 0.5 4.87 ? O2 PO4 105 D 1 
HETATM 7 O O3 PO4 . A . S 5 13.611 -1.48 -11.877 0.5 4.7 ? O3 PO4 105 D 1 
HETATM 8 O O3 PO4 . B . S 5 13.076 -0.035 -11.908 0.5 6.4 ? O3 PO4 105 D 1 
HETATM 9 O O4 PO4 . A . S 5 14.244 0.844 -11.501 0.5 4.27 ? O4 PO4 105 D 1 
HETATM 10 O O4 PO4 . B . S 5 14.994 0.931 -13.095 0.5 4.84 ? O4 PO4 105 D 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           401 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           10 
#