data_6UH3 # _model_server_result.job_id xsamt1ocRHqKDqDHSscqnA _model_server_result.datetime_utc '2024-10-11 07:22:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6uh3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":308}' # _entry.id 6UH3 # _exptl.entry_id 6UH3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 21 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.04 _cell.angle_gamma 90 _cell.entry_id 6UH3 _cell.length_a 49.449 _cell.length_b 102.139 _cell.length_c 56.77 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6UH3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 R N N ? 3 S N N ? 3 U N N ? 3 V N N ? 3 X N N ? 3 Y N N ? 3 Z N N ? 3 AA N N ? 3 BA N N ? 3 CA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NZ LYS 239 A LYS 241 1_555 C C15 RET . A RET 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 ? covale ? covale2 B NZ LYS 239 B LYS 241 1_555 Q C15 RET . B RET 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 253 n n C1 C2 PGE sing 254 n n C1 H1 PGE sing 255 n n C1 H12 PGE sing 256 n n O1 HO1 PGE sing 257 n n C2 O2 PGE sing 258 n n C2 H2 PGE sing 259 n n C2 H22 PGE sing 260 n n O2 C3 PGE sing 261 n n C3 C4 PGE sing 262 n n C3 H3 PGE sing 263 n n C3 H32 PGE sing 264 n n C4 O3 PGE sing 265 n n C4 H4 PGE sing 266 n n C4 H42 PGE sing 267 n n O4 C6 PGE sing 268 n n O4 HO4 PGE sing 269 n n C6 C5 PGE sing 270 n n C6 H6 PGE sing 271 n n C6 H62 PGE sing 272 n n C5 O3 PGE sing 273 n n C5 H5 PGE sing 274 n n C5 H52 PGE sing 275 n n # _atom_sites.entry_id 6UH3 _atom_sites.fract_transf_matrix[1][1] 0.020223 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001428 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009791 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017659 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 RET A 1 301 301 RET RET . D 3 PGE A 1 302 302 PGE PGE . E 3 PGE A 1 303 309 PGE PGE . F 3 PGE A 1 304 314 PGE PGE . G 3 PGE A 1 305 315 PGE PGE . H 3 PGE A 1 306 317 PGE PGE . I 3 PGE A 1 307 318 PGE PGE . J 3 PGE A 1 308 319 PGE PGE . K 3 PGE A 1 309 320 PGE PGE . L 3 PGE A 1 310 322 PGE PGE . M 3 PGE A 1 311 325 PGE PGE . N 3 PGE A 1 312 326 PGE PGE . O 4 PLM A 1 313 327 PLM PLM . P 4 PLM A 1 314 328 PLM PLM . Q 2 RET B 1 301 301 RET RET . R 3 PGE B 1 302 301 PGE PGE . S 3 PGE B 1 303 304 PGE PGE . T 5 PEG B 1 304 305 PEG PEG . U 3 PGE B 1 305 306 PGE PGE . V 3 PGE B 1 306 307 PGE PGE . W 5 PEG B 1 307 308 PEG PEG . X 3 PGE B 1 308 310 PGE PGE . Y 3 PGE B 1 309 311 PGE PGE . Z 3 PGE B 1 310 312 PGE PGE . AA 3 PGE B 1 311 313 PGE PGE . BA 3 PGE B 1 312 321 PGE PGE . CA 3 PGE B 1 313 323 PGE PGE . DA 4 PLM B 1 314 330 PLM PLM . EA 4 PLM B 1 315 332 PLM PLM . FA 6 HOH A 1 401 31 HOH HOH . FA 6 HOH A 2 402 34 HOH HOH . FA 6 HOH A 3 403 6 HOH HOH . FA 6 HOH A 4 404 5 HOH HOH . FA 6 HOH A 5 405 7 HOH HOH . FA 6 HOH A 6 406 22 HOH HOH . FA 6 HOH A 7 407 11 HOH HOH . FA 6 HOH A 8 408 30 HOH HOH . FA 6 HOH A 9 409 35 HOH HOH . FA 6 HOH A 10 410 28 HOH HOH . FA 6 HOH A 11 411 3 HOH HOH . FA 6 HOH A 12 412 15 HOH HOH . FA 6 HOH A 13 413 18 HOH HOH . FA 6 HOH A 14 414 8 HOH HOH . FA 6 HOH A 15 415 21 HOH HOH . FA 6 HOH A 16 416 27 HOH HOH . FA 6 HOH A 17 417 32 HOH HOH . GA 6 HOH B 1 401 19 HOH HOH . GA 6 HOH B 2 402 10 HOH HOH . GA 6 HOH B 3 403 2 HOH HOH . GA 6 HOH B 4 404 13 HOH HOH . GA 6 HOH B 5 405 4 HOH HOH . GA 6 HOH B 6 406 14 HOH HOH . GA 6 HOH B 7 407 23 HOH HOH . GA 6 HOH B 8 408 24 HOH HOH . GA 6 HOH B 9 409 1 HOH HOH . GA 6 HOH B 10 410 33 HOH HOH . GA 6 HOH B 11 411 36 HOH HOH . GA 6 HOH B 12 412 17 HOH HOH . GA 6 HOH B 13 413 25 HOH HOH . GA 6 HOH B 14 414 26 HOH HOH . GA 6 HOH B 15 415 20 HOH HOH . GA 6 HOH B 16 416 12 HOH HOH . GA 6 HOH B 17 417 9 HOH HOH . GA 6 HOH B 18 418 29 HOH HOH . GA 6 HOH B 19 419 16 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . J 3 68.88 31.315 65.786 1 50.14 ? C1 PGE 308 A 1 HETATM 2 O O1 PGE . . . J 3 68.922 30.796 67.091 1 43.8 ? O1 PGE 308 A 1 HETATM 3 C C2 PGE . . . J 3 67.429 31.583 65.388 1 42.77 ? C2 PGE 308 A 1 HETATM 4 O O2 PGE . . . J 3 67.235 31.247 64.041 1 53.02 ? O2 PGE 308 A 1 HETATM 5 C C3 PGE . . . J 3 65.975 30.706 63.753 1 40.03 ? C3 PGE 308 A 1 HETATM 6 C C4 PGE . . . J 3 65.901 30.202 62.311 1 35.72 ? C4 PGE 308 A 1 HETATM 7 O O4 PGE . . . J 3 65.413 31.573 57.816 1 31.94 ? O4 PGE 308 A 1 HETATM 8 C C6 PGE . . . J 3 65.349 32.033 59.144 1 34.43 ? C6 PGE 308 A 1 HETATM 9 C C5 PGE . . . J 3 65.529 30.842 60.088 1 35.22 ? C5 PGE 308 A 1 HETATM 10 O O3 PGE . . . J 3 65.758 31.268 61.407 1 35.87 ? O3 PGE 308 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 354 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 10 #