data_6UHU # _model_server_result.job_id gnxZ4wNR_XgSATKPs8o54A _model_server_result.datetime_utc '2024-11-15 22:38:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6uhu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":701}' # _entry.id 6UHU # _exptl.entry_id 6UHU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 205.083 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-(3-azanylpropylamino)pentyl-$l^{3}-oxidanyl-bis(oxidanyl)boron _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6UHU _cell.length_a 80.55 _cell.length_b 80.55 _cell.length_c 244.817 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6UHU _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall 'P 31 2"' _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ASP 172 A ASP 172 1_555 G K K . A K 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.856 ? metalc ? metalc2 A OD2 ASP 172 A ASP 172 1_555 G K K . A K 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.751 ? metalc ? metalc3 A OD1 ASP 174 A ASP 174 1_555 C ZN ZN . A ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? metalc ? metalc4 A OD2 ASP 174 A ASP 174 1_555 C ZN ZN . A ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? metalc ? metalc5 A O ASP 174 A ASP 174 1_555 G K K . A K 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.672 ? metalc ? metalc6 A ND1 HIS 176 A HIS 176 1_555 C ZN ZN . A ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc7 A O HIS 176 A HIS 176 1_555 G K K . A K 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.726 ? metalc ? metalc8 A O PHE 185 A PHE 185 1_555 H K K . A K 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.681 ? metalc ? metalc9 A O ASP 188 A ASP 188 1_555 H K K . A K 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.948 ? metalc ? metalc10 A O VAL 191 A VAL 191 1_555 H K K . A K 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.703 ? metalc ? metalc11 A OG SER 195 A SER 195 1_555 G K K . A K 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.72 ? metalc ? metalc12 A O TRP 196 A TRP 196 1_555 G K K . A K 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.724 ? metalc ? metalc13 A O PHE 224 A PHE 224 1_555 H K K . A K 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.921 ? metalc ? metalc14 A OD2 ASP 267 A ASP 267 1_555 C ZN ZN . A ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc15 B O13 Q7V . A Q7V 701 1_555 C ZN ZN . A ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.922 ? metalc ? metalc16 B O14 Q7V . A Q7V 701 1_555 C ZN ZN . A ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.435 ? metalc ? metalc17 H K K . A K 707 1_555 I O HOH . A HOH 832 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.118 ? # _chem_comp.formula 'C8 H22 B N2 O3 1' _chem_comp.formula_weight 205.083 _chem_comp.id Q7V _chem_comp.mon_nstd_flag . _chem_comp.name 5-(3-azanylpropylamino)pentyl-$l^{3}-oxidanyl-bis(oxidanyl)boron _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N01 C02 Q7V sing 281 n n C02 C03 Q7V sing 282 n n O13 B11 Q7V sing 283 n n C03 C04 Q7V sing 284 n n C04 N05 Q7V sing 285 n n B11 O12 Q7V sing 286 n n B11 O14 Q7V sing 287 n n B11 C10 Q7V sing 288 n n C09 C10 Q7V sing 289 n n C09 C08 Q7V sing 290 n n C07 C08 Q7V sing 291 n n C07 C06 Q7V sing 292 n n N05 C06 Q7V sing 293 n n C10 H1 Q7V sing 294 n n C10 H2 Q7V sing 295 n n C02 H3 Q7V sing 296 n n C02 H4 Q7V sing 297 n n C03 H5 Q7V sing 298 n n C03 H6 Q7V sing 299 n n C04 H7 Q7V sing 300 n n C04 H8 Q7V sing 301 n n C06 H9 Q7V sing 302 n n C06 H10 Q7V sing 303 n n C07 H11 Q7V sing 304 n n C07 H12 Q7V sing 305 n n C08 H13 Q7V sing 306 n n C08 H14 Q7V sing 307 n n C09 H15 Q7V sing 308 n n C09 H16 Q7V sing 309 n n N01 H17 Q7V sing 310 n n N01 H18 Q7V sing 311 n n N05 H20 Q7V sing 312 n n O12 H22 Q7V sing 313 n n O14 H24 Q7V sing 314 n n O13 H19 Q7V sing 315 n n # _atom_sites.entry_id 6UHU _atom_sites.fract_transf_matrix[1][1] 0.012415 _atom_sites.fract_transf_matrix[1][2] 0.007168 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014335 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004085 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 Q7V A 1 701 701 Q7V INH . C 3 ZN A 1 702 1 ZN ZN . D 4 PO4 A 1 703 1 PO4 PO4 . E 4 PO4 A 1 704 2 PO4 PO4 . F 4 PO4 A 1 705 3 PO4 PO4 . G 5 K A 1 706 1 K K . H 5 K A 1 707 2 K K . I 6 HOH A 1 801 24 HOH HOH . I 6 HOH A 2 802 20 HOH HOH . I 6 HOH A 3 803 25 HOH HOH . I 6 HOH A 4 804 38 HOH HOH . I 6 HOH A 5 805 34 HOH HOH . I 6 HOH A 6 806 3 HOH HOH . I 6 HOH A 7 807 22 HOH HOH . I 6 HOH A 8 808 37 HOH HOH . I 6 HOH A 9 809 33 HOH HOH . I 6 HOH A 10 810 11 HOH HOH . I 6 HOH A 11 811 17 HOH HOH . I 6 HOH A 12 812 26 HOH HOH . I 6 HOH A 13 813 7 HOH HOH . I 6 HOH A 14 814 12 HOH HOH . I 6 HOH A 15 815 14 HOH HOH . I 6 HOH A 16 816 2 HOH HOH . I 6 HOH A 17 817 15 HOH HOH . I 6 HOH A 18 818 18 HOH HOH . I 6 HOH A 19 819 9 HOH HOH . I 6 HOH A 20 820 31 HOH HOH . I 6 HOH A 21 821 42 HOH HOH . I 6 HOH A 22 822 28 HOH HOH . I 6 HOH A 23 823 4 HOH HOH . I 6 HOH A 24 824 29 HOH HOH . I 6 HOH A 25 825 27 HOH HOH . I 6 HOH A 26 826 8 HOH HOH . I 6 HOH A 27 827 19 HOH HOH . I 6 HOH A 28 828 30 HOH HOH . I 6 HOH A 29 829 43 HOH HOH . I 6 HOH A 30 830 32 HOH HOH . I 6 HOH A 31 831 16 HOH HOH . I 6 HOH A 32 832 10 HOH HOH . I 6 HOH A 33 833 39 HOH HOH . I 6 HOH A 34 834 23 HOH HOH . I 6 HOH A 35 835 6 HOH HOH . I 6 HOH A 36 836 36 HOH HOH . I 6 HOH A 37 837 40 HOH HOH . I 6 HOH A 38 838 41 HOH HOH . I 6 HOH A 39 839 35 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 Q7V . . . B 2 20.711 40.779 34.985 1 39.97 ? C10 Q7V 701 A 1 HETATM 2 B B11 Q7V . . . B 2 19.494 40.521 34.019 1 30.85 ? B11 Q7V 701 A 1 HETATM 3 C C02 Q7V . . . B 2 28.466 42.272 32.179 1 63.25 ? C02 Q7V 701 A 1 HETATM 4 C C03 Q7V . . . B 2 27.25 41.874 33.028 1 60.8 ? C03 Q7V 701 A 1 HETATM 5 C C04 Q7V . . . B 2 27.644 40.775 34.005 1 56.16 ? C04 Q7V 701 A 1 HETATM 6 C C06 Q7V . . . B 2 25.724 39.868 35.513 1 43.66 ? C06 Q7V 701 A 1 HETATM 7 C C07 Q7V . . . B 2 24.477 40.25 34.726 1 47.52 ? C07 Q7V 701 A 1 HETATM 8 C C08 Q7V . . . B 2 23.165 40.108 35.484 1 41.55 ? C08 Q7V 701 A 1 HETATM 9 C C09 Q7V . . . B 2 21.959 40.048 34.55 1 33.85 ? C09 Q7V 701 A 1 HETATM 10 N N01 Q7V . . . B 2 28.173 42.498 30.789 1 52.42 ? N01 Q7V 701 A 1 HETATM 11 N N05 Q7V . . . B 2 26.928 40.67 35.311 1 60.03 ? N05 Q7V 701 A 1 HETATM 12 O O12 Q7V . . . B 2 18.488 41.574 34.154 1 37.24 ? O12 Q7V 701 A 1 HETATM 13 O O13 Q7V . . . B 2 19.946 40.51 32.614 1 34.68 ? O13 Q7V 701 A 1 HETATM 14 O O14 Q7V . . . B 2 18.864 39.227 34.314 1 26.26 ? O14 Q7V 701 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 367 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 14 #