data_6UIZ
#
_model_server_result.job_id            viqUkohw4z1wlXnVH3MeXw 
_model_server_result.datetime_utc      '2024-11-13 18:46:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6uiz 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":201}' 
#
_entry.id    6UIZ 
#
_exptl.entry_id    6UIZ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              567.488 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            {N-(2-{bis[(pyridin-2-yl-kappaN)methyl]amino-kappaN}ethyl)-5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanamide}(triaza-1,2-dien-2-ium-1-ide-kappaN~1~)iron(4+) 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6UIZ 
_cell.length_a            57.75 
_cell.length_b            57.75 
_cell.length_c            184.499 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6UIZ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        98 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 41 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z 0 -1 0 -1 0 0 0 0 -1 57.75 57.75 0 
3 'crystal symmetry operation' 10_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 57.75 57.75 0 
4 'crystal symmetry operation' 15_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE1 GLU 112 A GLU 112 1_555 B FE1 QG4 . A QG4 201 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.347 ? 
metalc ? metalc2 B FE1 QG4 . A QG4 201 1_555 C OXT ACT . A ACT 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? 
#
_chem_comp.formula           'C24 H33 Fe N9 O2 S 4' 
_chem_comp.formula_weight    567.488 
_chem_comp.id                QG4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              {N-(2-{bis[(pyridin-2-yl-kappaN)methyl]amino-kappaN}ethyl)-5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanamide}(triaza-1,2-dien-2-ium-1-ide-kappaN~1~)iron(4+) 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N9 N8 QG4 doub 270 n n 
N7 N8 QG4 doub 271 n n 
N7 FE1 QG4 sing 272 n n 
C22 C21 QG4 doub 273 n y 
C22 N5 QG4 sing 274 n y 
C21 C20 QG4 sing 275 n y 
FE1 N5 QG4 sing 276 n n 
FE1 N3 QG4 sing 277 n n 
N5 C18 QG4 doub 278 n y 
C20 C19 QG4 doub 279 n y 
C18 C19 QG4 sing 280 n y 
C18 C17 QG4 sing 281 n n 
C24 C23 QG4 sing 282 n n 
C24 N6 QG4 sing 283 n n 
O1 C1 QG4 doub 284 n n 
N4 C16 QG4 doub 285 n y 
N4 C12 QG4 sing 286 n y 
C17 N3 QG4 sing 287 n n 
C16 C15 QG4 sing 288 n y 
N3 C23 QG4 sing 289 n n 
N3 C11 QG4 sing 290 n n 
C1 N6 QG4 sing 291 n n 
C1 C2 QG4 sing 292 n n 
C11 C12 QG4 sing 293 n n 
C2 C3 QG4 sing 294 n n 
C12 C13 QG4 doub 295 n y 
C15 C14 QG4 doub 296 n y 
C3 C4 QG4 sing 297 n n 
C13 C14 QG4 sing 298 n y 
C4 C5 QG4 sing 299 n n 
C5 C6 QG4 sing 300 n n 
C6 C10 QG4 sing 301 n n 
C6 S1 QG4 sing 302 n n 
N2 C10 QG4 sing 303 n n 
N2 C9 QG4 sing 304 n n 
C10 C8 QG4 sing 305 n n 
S1 C7 QG4 sing 306 n n 
C9 O2 QG4 doub 307 n n 
C9 N1 QG4 sing 308 n n 
C8 C7 QG4 sing 309 n n 
C8 N1 QG4 sing 310 n n 
N1 H1 QG4 sing 311 n n 
N2 H2 QG4 sing 312 n n 
C10 H3 QG4 sing 313 n n 
C8 H4 QG4 sing 314 n n 
C7 H5 QG4 sing 315 n n 
C7 H6 QG4 sing 316 n n 
C6 H7 QG4 sing 317 n n 
C5 H8 QG4 sing 318 n n 
C5 H9 QG4 sing 319 n n 
C4 H10 QG4 sing 320 n n 
C4 H11 QG4 sing 321 n n 
C3 H12 QG4 sing 322 n n 
C3 H13 QG4 sing 323 n n 
C2 H14 QG4 sing 324 n n 
C2 H15 QG4 sing 325 n n 
C24 H16 QG4 sing 326 n n 
C24 H17 QG4 sing 327 n n 
N6 H18 QG4 sing 328 n n 
C23 H19 QG4 sing 329 n n 
C23 H20 QG4 sing 330 n n 
C11 H21 QG4 sing 331 n n 
C11 H22 QG4 sing 332 n n 
C17 H23 QG4 sing 333 n n 
C17 H24 QG4 sing 334 n n 
C16 H25 QG4 sing 335 n n 
C15 H26 QG4 sing 336 n n 
C14 H27 QG4 sing 337 n n 
C13 H28 QG4 sing 338 n n 
C22 H29 QG4 sing 339 n n 
C21 H30 QG4 sing 340 n n 
C20 H31 QG4 sing 341 n n 
C19 H32 QG4 sing 342 n n 
N9 H33 QG4 sing 343 n n 
FE1 N4 QG4 sing 344 n n 
#
_atom_sites.entry_id                     6UIZ 
_atom_sites.fract_transf_matrix[1][1]    0.017316 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017316 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00542 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 QG4 A 1 201 1 QG4 KM4 . 
C 3 ACT A 1 202 1 ACT ACT . 
D 3 ACT A 1 203 2 ACT ACT . 
E 3 ACT A 1 204 3 ACT ACT . 
F 4 HOH A 1 301 99 HOH HOH . 
F 4 HOH A 2 302 142 HOH HOH . 
F 4 HOH A 3 303 50 HOH HOH . 
F 4 HOH A 4 304 17 HOH HOH . 
F 4 HOH A 5 305 47 HOH HOH . 
F 4 HOH A 6 306 41 HOH HOH . 
F 4 HOH A 7 307 38 HOH HOH . 
F 4 HOH A 8 308 62 HOH HOH . 
F 4 HOH A 9 309 49 HOH HOH . 
F 4 HOH A 10 310 52 HOH HOH . 
F 4 HOH A 11 311 44 HOH HOH . 
F 4 HOH A 12 312 3 HOH HOH . 
F 4 HOH A 13 313 16 HOH HOH . 
F 4 HOH A 14 314 27 HOH HOH . 
F 4 HOH A 15 315 46 HOH HOH . 
F 4 HOH A 16 316 45 HOH HOH . 
F 4 HOH A 17 317 4 HOH HOH . 
F 4 HOH A 18 318 34 HOH HOH . 
F 4 HOH A 19 319 58 HOH HOH . 
F 4 HOH A 20 320 73 HOH HOH . 
F 4 HOH A 21 321 26 HOH HOH . 
F 4 HOH A 22 322 6 HOH HOH . 
F 4 HOH A 23 323 31 HOH HOH . 
F 4 HOH A 24 324 18 HOH HOH . 
F 4 HOH A 25 325 66 HOH HOH . 
F 4 HOH A 26 326 19 HOH HOH . 
F 4 HOH A 27 327 30 HOH HOH . 
F 4 HOH A 28 328 23 HOH HOH . 
F 4 HOH A 29 329 33 HOH HOH . 
F 4 HOH A 30 330 15 HOH HOH . 
F 4 HOH A 31 331 24 HOH HOH . 
F 4 HOH A 32 332 59 HOH HOH . 
F 4 HOH A 33 333 7 HOH HOH . 
F 4 HOH A 34 334 39 HOH HOH . 
F 4 HOH A 35 335 80 HOH HOH . 
F 4 HOH A 36 336 22 HOH HOH . 
F 4 HOH A 37 337 124 HOH HOH . 
F 4 HOH A 38 338 110 HOH HOH . 
F 4 HOH A 39 339 104 HOH HOH . 
F 4 HOH A 40 340 126 HOH HOH . 
F 4 HOH A 41 341 42 HOH HOH . 
F 4 HOH A 42 342 35 HOH HOH . 
F 4 HOH A 43 343 88 HOH HOH . 
F 4 HOH A 44 344 86 HOH HOH . 
F 4 HOH A 45 345 25 HOH HOH . 
F 4 HOH A 46 346 75 HOH HOH . 
F 4 HOH A 47 347 55 HOH HOH . 
F 4 HOH A 48 348 84 HOH HOH . 
F 4 HOH A 49 349 51 HOH HOH . 
F 4 HOH A 50 350 13 HOH HOH . 
F 4 HOH A 51 351 53 HOH HOH . 
F 4 HOH A 52 352 36 HOH HOH . 
F 4 HOH A 53 353 2 HOH HOH . 
F 4 HOH A 54 354 61 HOH HOH . 
F 4 HOH A 55 355 14 HOH HOH . 
F 4 HOH A 56 356 11 HOH HOH . 
F 4 HOH A 57 357 12 HOH HOH . 
F 4 HOH A 58 358 139 HOH HOH . 
F 4 HOH A 59 359 1 HOH HOH . 
F 4 HOH A 60 360 54 HOH HOH . 
F 4 HOH A 61 361 9 HOH HOH . 
F 4 HOH A 62 362 56 HOH HOH . 
F 4 HOH A 63 363 40 HOH HOH . 
F 4 HOH A 64 364 70 HOH HOH . 
F 4 HOH A 65 365 143 HOH HOH . 
F 4 HOH A 66 366 92 HOH HOH . 
F 4 HOH A 67 367 87 HOH HOH . 
F 4 HOH A 68 368 81 HOH HOH . 
F 4 HOH A 69 369 140 HOH HOH . 
F 4 HOH A 70 370 21 HOH HOH . 
F 4 HOH A 71 371 5 HOH HOH . 
F 4 HOH A 72 372 133 HOH HOH . 
F 4 HOH A 73 373 43 HOH HOH . 
F 4 HOH A 74 374 138 HOH HOH . 
F 4 HOH A 75 375 8 HOH HOH . 
F 4 HOH A 76 376 29 HOH HOH . 
F 4 HOH A 77 377 68 HOH HOH . 
F 4 HOH A 78 378 64 HOH HOH . 
F 4 HOH A 79 379 37 HOH HOH . 
F 4 HOH A 80 380 32 HOH HOH . 
F 4 HOH A 81 381 63 HOH HOH . 
F 4 HOH A 82 382 98 HOH HOH . 
F 4 HOH A 83 383 20 HOH HOH . 
F 4 HOH A 84 384 78 HOH HOH . 
F 4 HOH A 85 385 141 HOH HOH . 
F 4 HOH A 86 386 67 HOH HOH . 
F 4 HOH A 87 387 108 HOH HOH . 
F 4 HOH A 88 388 89 HOH HOH . 
F 4 HOH A 89 389 10 HOH HOH . 
F 4 HOH A 90 390 74 HOH HOH . 
F 4 HOH A 91 391 48 HOH HOH . 
F 4 HOH A 92 392 113 HOH HOH . 
F 4 HOH A 93 393 144 HOH HOH . 
F 4 HOH A 94 394 97 HOH HOH . 
F 4 HOH A 95 395 28 HOH HOH . 
F 4 HOH A 96 396 128 HOH HOH . 
F 4 HOH A 97 397 109 HOH HOH . 
F 4 HOH A 98 398 121 HOH HOH . 
F 4 HOH A 99 399 91 HOH HOH . 
F 4 HOH A 100 400 96 HOH HOH . 
F 4 HOH A 101 401 105 HOH HOH . 
F 4 HOH A 102 402 129 HOH HOH . 
F 4 HOH A 103 403 137 HOH HOH . 
F 4 HOH A 104 404 60 HOH HOH . 
F 4 HOH A 105 405 130 HOH HOH . 
F 4 HOH A 106 406 82 HOH HOH . 
F 4 HOH A 107 407 136 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O2 QG4 . . . B 2 14.35 29.422 -8.272 1 11.98 ? O2 QG4 201 A 1 
HETATM 2 C C9 QG4 . . . B 2 15.572 29.589 -8.519 1 12.79 ? C9 QG4 201 A 1 
HETATM 3 N N1 QG4 . . . B 2 16.508 29.662 -7.55 1 11.62 ? N1 QG4 201 A 1 
HETATM 4 N N2 QG4 . . . B 2 16.102 29.254 -9.748 1 11.45 ? N2 QG4 201 A 1 
HETATM 5 C C10 QG4 . . . B 2 17.544 29.257 -9.656 1 11.65 ? C10 QG4 201 A 1 
HETATM 6 C C8 QG4 . . . B 2 17.865 29.522 -8.15 1 10.98 ? C8 QG4 201 A 1 
HETATM 7 C C7 QG4 . . . B 2 18.55 28.237 -7.606 1 12.67 ? C7 QG4 201 A 1 
HETATM 8 S S1 QG4 . . . B 2 17.954 26.882 -8.602 1 13.13 ? S1 QG4 201 A 1 
HETATM 9 C C6 QG4 . . . B 2 18.154 27.882 -10.07 1 12.35 ? C6 QG4 201 A 1 
HETATM 10 C C5 QG4 . . . B 2 17.575 27.295 -11.378 1 12.4 ? C5 QG4 201 A 1 
HETATM 11 C C4 QG4 . . . B 2 18.302 26.081 -11.943 1 11.68 ? C4 QG4 201 A 1 
HETATM 12 C C3 QG4 . . . B 2 17.629 25.479 -13.192 1 12.92 ? C3 QG4 201 A 1 
HETATM 13 C C2 QG4 . . . B 2 18.524 24.348 -13.756 1 13.28 ? C2 QG4 201 A 1 
HETATM 14 C C1 QG4 . . . B 2 19.805 24.777 -14.545 1 13.95 ? C1 QG4 201 A 1 
HETATM 15 C C24 QG4 . . . B 2 21.805 24.502 -15.085 1 17.17 ? C24 QG4 201 A 1 
HETATM 16 O O1 QG4 . . . B 2 19.694 25.893 -15.036 1 16.55 ? O1 QG4 201 A 1 
HETATM 17 N N6 QG4 . . . B 2 20.802 23.967 -14.116 1 15.17 ? N6 QG4 201 A 1 
HETATM 18 C C23 QG4 . . . B 2 22.436 25.734 -14.443 1 22.25 ? C23 QG4 201 A 1 
HETATM 19 N N3 QG4 . . . B 2 23.819 26.01 -14.756 1 27.91 ? N3 QG4 201 A 1 
HETATM 20 C C11 QG4 . . . B 2 24.669 25.123 -13.849 1 29.94 ? C11 QG4 201 A 1 
HETATM 21 C C17 QG4 . . . B 2 24.01 27.459 -14.802 1 29.99 ? C17 QG4 201 A 1 
HETATM 22 FE FE1 QG4 . . . B 2 25.011 25.32 -16.556 1 26.99 ? FE1 QG4 201 A 1 
HETATM 23 N N4 QG4 . . . B 2 26.815 25.475 -14.808 1 32.12 ? N4 QG4 201 A 1 
HETATM 24 C C16 QG4 . . . B 2 28.169 25.737 -14.796 1 31.62 ? C16 QG4 201 A 1 
HETATM 25 C C15 QG4 . . . B 2 28.875 25.713 -13.575 1 31.44 ? C15 QG4 201 A 1 
HETATM 26 C C14 QG4 . . . B 2 28.229 25.5 -12.34 1 21.56 ? C14 QG4 201 A 1 
HETATM 27 C C13 QG4 . . . B 2 26.814 25.279 -12.409 1 29.69 ? C13 QG4 201 A 1 
HETATM 28 C C12 QG4 . . . B 2 26.137 25.293 -13.694 1 32.27 ? C12 QG4 201 A 1 
HETATM 29 N N5 QG4 . . . B 2 25.778 27.452 -16.5 1 37.07 ? N5 QG4 201 A 1 
HETATM 30 C C18 QG4 . . . B 2 25.089 28.133 -15.559 1 36.26 ? C18 QG4 201 A 1 
HETATM 31 C C22 QG4 . . . B 2 26.817 28.025 -17.207 1 44.25 ? C22 QG4 201 A 1 
HETATM 32 C C21 QG4 . . . B 2 27.196 29.387 -16.985 1 43.17 ? C21 QG4 201 A 1 
HETATM 33 C C20 QG4 . . . B 2 26.465 30.115 -16.006 1 48.93 ? C20 QG4 201 A 1 
HETATM 34 C C19 QG4 . . . B 2 25.394 29.487 -15.273 1 40.35 ? C19 QG4 201 A 1 
HETATM 35 N N7 QG4 . . . B 2 23.495 25.372 -18.085 1 31.74 ? N7 QG4 201 A 1 
HETATM 36 N N8 QG4 . . . B 2 22.625 26.257 -18.068 1 33.28 ? N8 QG4 201 A 1 
HETATM 37 N N9 QG4 . . . B 2 21.725 27.104 -18.089 1 32.73 ? N9 QG4 201 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           296 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           37 
#