data_6UJ1 # _model_server_result.job_id skZTOXYZO-Eu7h6tqD2LzQ _model_server_result.datetime_utc '2024-11-01 01:23:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6uj1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 6UJ1 # _exptl.entry_id 6UJ1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 628.865 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3S)-3-hydroxy-N-(2-methylpropyl)-N~2~-{[(4S)-17-[(methylsulfonyl)(propyl)amino]-2-oxo-3-azatricyclo[13.3.1.1~6,10~]icosa-1(19),6(20),7,9,15,17-hexaen-4-yl]methyl}-L-norleucinamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6UJ1 _cell.length_a 123.068 _cell.length_b 123.068 _cell.length_c 118.055 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6UJ1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall 'P 31 2"' _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C 1 1 B,D 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 233 A CYS 171 1_555 A SG CYS 433 A CYS 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? disulf ? disulf2 A SG CYS 292 A CYS 230 1_555 A SG CYS 457 A CYS 395 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? disulf ? disulf3 A SG CYS 344 A CYS 282 1_555 A SG CYS 393 A CYS 331 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf4 B SG CYS 233 B CYS 171 1_555 B SG CYS 433 B CYS 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf5 B SG CYS 292 B CYS 230 1_555 B SG CYS 457 B CYS 395 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf6 B SG CYS 344 B CYS 282 1_555 B SG CYS 393 B CYS 331 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? # _chem_comp.formula 'C34 H52 N4 O5 S' _chem_comp.formula_weight 628.865 _chem_comp.id L3M _chem_comp.mon_nstd_flag . _chem_comp.name (3S)-3-hydroxy-N-(2-methylpropyl)-N~2~-{[(4S)-17-[(methylsulfonyl)(propyl)amino]-2-oxo-3-azatricyclo[13.3.1.1~6,10~]icosa-1(19),6(20),7,9,15,17-hexaen-4-yl]methyl}-L-norleucinamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C08 C07 L3M sing 171 n n C08 C09 L3M sing 172 n n O41 S40 L3M doub 173 n n C06 C07 L3M sing 174 n n C06 C05 L3M sing 175 n n C09 C10 L3M sing 176 n n O43 S40 L3M doub 177 n n S40 C42 L3M sing 178 n n S40 N36 L3M sing 179 n n C05 C34 L3M doub 180 n y C05 C04 L3M sing 181 n y C34 C35 L3M sing 182 n y C10 C33 L3M doub 183 n y C10 C11 L3M sing 184 n y C04 C03 L3M doub 185 n y C35 N36 L3M sing 186 n n C35 C44 L3M doub 187 n y C33 C14 L3M sing 188 n y N36 C37 L3M sing 189 n n C11 C12 L3M doub 190 n y C03 C44 L3M sing 191 n y C03 C02 L3M sing 192 n n C14 C15 L3M sing 193 n n C14 C13 L3M doub 194 n y C39 C38 L3M sing 195 n n C37 C38 L3M sing 196 n n N32 C02 L3M sing 197 n n N32 C16 L3M sing 198 n n C12 C13 L3M sing 199 n y C02 O01 L3M doub 200 n n C15 C16 L3M sing 201 n n C16 C17 L3M sing 202 n n C17 N18 L3M sing 203 n n N18 C19 L3M sing 204 n n O28 C27 L3M sing 205 n n C19 C27 L3M sing 206 n n C19 C20 L3M sing 207 n n C27 C29 L3M sing 208 n n C20 O26 L3M doub 209 n n C20 N21 L3M sing 210 n n C29 C30 L3M sing 211 n n C30 C31 L3M sing 212 n n N21 C22 L3M sing 213 n n C22 C23 L3M sing 214 n n C23 C25 L3M sing 215 n n C23 C24 L3M sing 216 n n C04 H041 L3M sing 217 n n C06 H061 L3M sing 218 n n C06 H062 L3M sing 219 n n C07 H072 L3M sing 220 n n C07 H071 L3M sing 221 n n C08 H081 L3M sing 222 n n C08 H082 L3M sing 223 n n C09 H092 L3M sing 224 n n C09 H091 L3M sing 225 n n C11 H111 L3M sing 226 n n C12 H121 L3M sing 227 n n C13 H131 L3M sing 228 n n C15 H152 L3M sing 229 n n C15 H151 L3M sing 230 n n C16 H161 L3M sing 231 n n C17 H171 L3M sing 232 n n C17 H172 L3M sing 233 n n N18 H1 L3M sing 234 n n C19 H191 L3M sing 235 n n N21 H211 L3M sing 236 n n C22 H221 L3M sing 237 n n C22 H222 L3M sing 238 n n C23 H231 L3M sing 239 n n C24 H243 L3M sing 240 n n C24 H242 L3M sing 241 n n C24 H241 L3M sing 242 n n C25 H253 L3M sing 243 n n C25 H251 L3M sing 244 n n C25 H252 L3M sing 245 n n C27 H271 L3M sing 246 n n O28 H281 L3M sing 247 n n C29 H292 L3M sing 248 n n C29 H291 L3M sing 249 n n C30 H301 L3M sing 250 n n C30 H302 L3M sing 251 n n C31 H311 L3M sing 252 n n C31 H313 L3M sing 253 n n C31 H312 L3M sing 254 n n N32 H321 L3M sing 255 n n C33 H331 L3M sing 256 n n C34 H341 L3M sing 257 n n C37 H371 L3M sing 258 n n C37 H372 L3M sing 259 n n C38 H382 L3M sing 260 n n C38 H381 L3M sing 261 n n C39 H391 L3M sing 262 n n C39 H393 L3M sing 263 n n C39 H392 L3M sing 264 n n C42 H421 L3M sing 265 n n C42 H422 L3M sing 266 n n C42 H423 L3M sing 267 n n C44 H441 L3M sing 268 n n # _atom_sites.entry_id 6UJ1 _atom_sites.fract_transf_matrix[1][1] 0.008126 _atom_sites.fract_transf_matrix[1][2] 0.004691 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009383 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008471 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 L3M A 1 401 401 L3M 28 . D 2 L3M B 1 401 401 L3M 28 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O01 L3M . . . C 2 -1.311 -58.327 11.394 1 77.35 ? O01 L3M 401 A 1 HETATM 2 C C02 L3M . . . C 2 -0.933 -57.249 11.849 1 79.88 ? C02 L3M 401 A 1 HETATM 3 C C03 L3M . . . C 2 0.056 -57.222 12.886 1 85.03 ? C03 L3M 401 A 1 HETATM 4 C C04 L3M . . . C 2 -0.065 -56.314 13.892 1 85.96 ? C04 L3M 401 A 1 HETATM 5 C C05 L3M . . . C 2 0.818 -56.22 14.922 1 89.3 ? C05 L3M 401 A 1 HETATM 6 C C06 L3M . . . C 2 0.622 -55.183 16.013 1 88.4 ? C06 L3M 401 A 1 HETATM 7 C C07 L3M . . . C 2 0.52 -53.703 15.618 1 88.61 ? C07 L3M 401 A 1 HETATM 8 C C08 L3M . . . C 2 -0.536 -53.283 14.635 1 88.37 ? C08 L3M 401 A 1 HETATM 9 C C09 L3M . . . C 2 -1.919 -53.396 15.204 1 85.05 ? C09 L3M 401 A 1 HETATM 10 C C10 L3M . . . C 2 -2.916 -54.12 14.387 1 86.3 ? C10 L3M 401 A 1 HETATM 11 C C11 L3M . . . C 2 -3.991 -54.655 14.975 1 85.79 ? C11 L3M 401 A 1 HETATM 12 C C12 L3M . . . C 2 -4.919 -55.328 14.232 1 87.9 ? C12 L3M 401 A 1 HETATM 13 C C13 L3M . . . C 2 -4.769 -55.477 12.872 1 84.09 ? C13 L3M 401 A 1 HETATM 14 C C14 L3M . . . C 2 -3.692 -54.955 12.221 1 81.74 ? C14 L3M 401 A 1 HETATM 15 C C15 L3M . . . C 2 -3.515 -55.143 10.718 1 72.74 ? C15 L3M 401 A 1 HETATM 16 C C16 L3M . . . C 2 -2.526 -56.248 10.324 1 74.56 ? C16 L3M 401 A 1 HETATM 17 C C17 L3M . . . C 2 -1.92 -56.067 8.91 1 71.53 ? C17 L3M 401 A 1 HETATM 18 N N18 L3M . . . C 2 -1.207 -57.237 8.408 1 73.21 ? N18 L3M 401 A 1 HETATM 19 C C19 L3M . . . C 2 -1.973 -58.041 7.392 1 76.94 ? C19 L3M 401 A 1 HETATM 20 C C20 L3M . . . C 2 -3.031 -58.789 7.985 1 75.99 ? C20 L3M 401 A 1 HETATM 21 N N21 L3M . . . C 2 -4.193 -59.134 7.419 1 73.76 ? N21 L3M 401 A 1 HETATM 22 C C22 L3M . . . C 2 -4.666 -58.754 6.152 1 75.4 ? C22 L3M 401 A 1 HETATM 23 C C23 L3M . . . C 2 -5.891 -59.531 5.716 1 78.57 ? C23 L3M 401 A 1 HETATM 24 C C24 L3M . . . C 2 -6.395 -58.935 4.498 1 72.81 ? C24 L3M 401 A 1 HETATM 25 C C25 L3M . . . C 2 -7.009 -59.401 6.649 1 79.13 ? C25 L3M 401 A 1 HETATM 26 O O26 L3M . . . C 2 -2.759 -59.248 9.119 1 76.68 ? O26 L3M 401 A 1 HETATM 27 C C27 L3M . . . C 2 -1.032 -59.117 6.894 1 79.18 ? C27 L3M 401 A 1 HETATM 28 O O28 L3M . . . C 2 -0.594 -59.767 8.027 1 76.84 ? O28 L3M 401 A 1 HETATM 29 C C29 L3M . . . C 2 -1.76 -60.2 6.177 1 79.57 ? C29 L3M 401 A 1 HETATM 30 C C30 L3M . . . C 2 -0.862 -61.304 5.795 1 79.47 ? C30 L3M 401 A 1 HETATM 31 C C31 L3M . . . C 2 0.501 -60.793 5.555 1 81.54 ? C31 L3M 401 A 1 HETATM 32 N N32 L3M . . . C 2 -1.521 -56.211 11.303 1 77.48 ? N32 L3M 401 A 1 HETATM 33 C C33 L3M . . . C 2 -2.79 -54.295 13.023 1 82.47 ? C33 L3M 401 A 1 HETATM 34 C C34 L3M . . . C 2 1.871 -57.102 14.935 1 94.69 ? C34 L3M 401 A 1 HETATM 35 C C35 L3M . . . C 2 2.05 -58.048 13.953 1 96.08 ? C35 L3M 401 A 1 HETATM 36 N N36 L3M . . . C 2 3.094 -58.902 14.028 1 100.08 ? N36 L3M 401 A 1 HETATM 37 C C37 L3M . . . C 2 2.883 -60.22 13.775 1 101.96 ? C37 L3M 401 A 1 HETATM 38 C C38 L3M . . . C 2 2.347 -60.901 14.963 1 99.84 ? C38 L3M 401 A 1 HETATM 39 C C39 L3M . . . C 2 0.983 -61.464 14.77 1 95.89 ? C39 L3M 401 A 1 HETATM 40 S S40 L3M . . . C 2 4.422 -58.53 14.451 1 101.11 ? S40 L3M 401 A 1 HETATM 41 O O41 L3M . . . C 2 4.655 -57.232 14.132 1 94.33 ? O41 L3M 401 A 1 HETATM 42 C C42 L3M . . . C 2 4.45 -58.71 16.065 1 94.06 ? C42 L3M 401 A 1 HETATM 43 O O43 L3M . . . C 2 5.356 -59.332 13.886 1 95.24 ? O43 L3M 401 A 1 HETATM 44 C C44 L3M . . . C 2 1.113 -58.083 12.946 1 87.47 ? C44 L3M 401 A 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 44 #