data_6UJ8 # _model_server_result.job_id ftHmMYPC4ztbrEpWUuYfow _model_server_result.datetime_utc '2024-12-22 06:14:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6uj8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":302}' # _entry.id 6UJ8 # _exptl.entry_id 6UJ8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.278 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PENTAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.65 _cell.angle_gamma 90 _cell.entry_id 6UJ8 _cell.length_a 67.69 _cell.length_b 70.48 _cell.length_c 88.146 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6UJ8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,G,H,I,J,K,L,M,N,S,T,U 1 1 D,E,F,O,P,Q,R,V,W,X 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 102 A CYS 101 1_555 A SG CYS 165 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? disulf ? disulf2 A SG CYS 204 A CYS 203 1_555 A SG CYS 260 A CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? disulf ? disulf3 B SG CYS 45 B CYS 45 1_555 B SG CYS 100 B CYS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 D SG CYS 102 D CYS 101 1_555 D SG CYS 165 D CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? disulf ? disulf5 D SG CYS 204 D CYS 203 1_555 D SG CYS 260 D CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? disulf ? disulf6 E SG CYS 45 E CYS 45 1_555 E SG CYS 100 E CYS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.993 ? # _chem_comp.formula 'C10 H22 O6' _chem_comp.formula_weight 238.278 _chem_comp.id 1PE _chem_comp.mon_nstd_flag . _chem_comp.name 'PENTAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms PEG400 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OH2 C12 1PE sing 1 n n OH2 HO2 1PE sing 2 n n C12 C22 1PE sing 3 n n C12 H121 1PE sing 4 n n C12 H122 1PE sing 5 n n C22 OH3 1PE sing 6 n n C22 H221 1PE sing 7 n n C22 H222 1PE sing 8 n n OH3 C23 1PE sing 9 n n C13 C23 1PE sing 10 n n C13 OH4 1PE sing 11 n n C13 H131 1PE sing 12 n n C13 H132 1PE sing 13 n n C23 H231 1PE sing 14 n n C23 H232 1PE sing 15 n n OH4 C24 1PE sing 16 n n C14 C24 1PE sing 17 n n C14 OH5 1PE sing 18 n n C14 H141 1PE sing 19 n n C14 H142 1PE sing 20 n n C24 H241 1PE sing 21 n n C24 H242 1PE sing 22 n n OH5 C25 1PE sing 23 n n C15 C25 1PE sing 24 n n C15 OH6 1PE sing 25 n n C15 H151 1PE sing 26 n n C15 H152 1PE sing 27 n n C25 H251 1PE sing 28 n n C25 H252 1PE sing 29 n n OH6 C26 1PE sing 30 n n C16 C26 1PE sing 31 n n C16 OH7 1PE sing 32 n n C16 H161 1PE sing 33 n n C16 H162 1PE sing 34 n n C26 H261 1PE sing 35 n n C26 H262 1PE sing 36 n n OH7 HO7 1PE sing 37 n n # _atom_sites.entry_id 6UJ8 _atom_sites.fract_transf_matrix[1][1] 0.014773 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004699 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014188 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011905 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 PEG A 1 301 301 PEG PEG . H 5 1PE A 1 302 401 1PE 1PE . I 4 PEG A 1 303 501 PEG PEG . J 6 SO4 A 1 304 1 SO4 SO4 . K 6 SO4 A 1 305 3 SO4 SO4 . L 4 PEG B 1 201 201 PEG PEG . M 7 PGE B 1 202 301 PGE PGE . N 4 PEG B 1 203 401 PEG PEG . O 8 PG4 D 1 301 301 PG4 PG4 . P 4 PEG D 1 302 401 PEG PEG . Q 6 SO4 D 1 303 2 SO4 SO4 . R 4 PEG E 1 201 201 PEG PEG . S 9 HOH A 1 401 112 HOH HOH . S 9 HOH A 2 402 125 HOH HOH . S 9 HOH A 3 403 114 HOH HOH . S 9 HOH A 4 404 6 HOH HOH . S 9 HOH A 5 405 74 HOH HOH . S 9 HOH A 6 406 121 HOH HOH . S 9 HOH A 7 407 69 HOH HOH . S 9 HOH A 8 408 46 HOH HOH . S 9 HOH A 9 409 116 HOH HOH . S 9 HOH A 10 410 39 HOH HOH . S 9 HOH A 11 411 3 HOH HOH . S 9 HOH A 12 412 85 HOH HOH . S 9 HOH A 13 413 68 HOH HOH . S 9 HOH A 14 414 70 HOH HOH . S 9 HOH A 15 415 222 HOH HOH . S 9 HOH A 16 416 105 HOH HOH . S 9 HOH A 17 417 65 HOH HOH . S 9 HOH A 18 418 72 HOH HOH . S 9 HOH A 19 419 45 HOH HOH . S 9 HOH A 20 420 1 HOH HOH . S 9 HOH A 21 421 40 HOH HOH . S 9 HOH A 22 422 113 HOH HOH . S 9 HOH A 23 423 83 HOH HOH . S 9 HOH A 24 424 62 HOH HOH . S 9 HOH A 25 425 63 HOH HOH . S 9 HOH A 26 426 37 HOH HOH . S 9 HOH A 27 427 81 HOH HOH . S 9 HOH A 28 428 79 HOH HOH . S 9 HOH A 29 429 73 HOH HOH . S 9 HOH A 30 430 40 HOH HOH . S 9 HOH A 31 431 73 HOH HOH . S 9 HOH A 32 432 124 HOH HOH . S 9 HOH A 33 433 4 HOH HOH . S 9 HOH A 34 434 5 HOH HOH . S 9 HOH A 35 435 18 HOH HOH . S 9 HOH A 36 436 186 HOH HOH . S 9 HOH A 37 437 52 HOH HOH . S 9 HOH A 38 438 20 HOH HOH . S 9 HOH A 39 439 41 HOH HOH . S 9 HOH A 40 440 117 HOH HOH . S 9 HOH A 41 441 122 HOH HOH . S 9 HOH A 42 442 82 HOH HOH . S 9 HOH A 43 443 35 HOH HOH . S 9 HOH A 44 444 71 HOH HOH . S 9 HOH A 45 445 43 HOH HOH . S 9 HOH A 46 446 2 HOH HOH . S 9 HOH A 47 447 115 HOH HOH . S 9 HOH A 48 448 123 HOH HOH . S 9 HOH A 49 449 120 HOH HOH . S 9 HOH A 50 450 55 HOH HOH . S 9 HOH A 51 451 54 HOH HOH . S 9 HOH A 52 452 25 HOH HOH . S 9 HOH A 53 453 76 HOH HOH . S 9 HOH A 54 454 19 HOH HOH . S 9 HOH A 55 455 129 HOH HOH . S 9 HOH A 56 456 78 HOH HOH . S 9 HOH A 57 457 113 HOH HOH . S 9 HOH A 58 458 16 HOH HOH . S 9 HOH A 59 459 56 HOH HOH . T 9 HOH B 1 301 126 HOH HOH . T 9 HOH B 2 302 75 HOH HOH . T 9 HOH B 3 303 8 HOH HOH . T 9 HOH B 4 304 44 HOH HOH . T 9 HOH B 5 305 38 HOH HOH . T 9 HOH B 6 306 89 HOH HOH . T 9 HOH B 7 307 88 HOH HOH . T 9 HOH B 8 308 138 HOH HOH . T 9 HOH B 9 309 86 HOH HOH . T 9 HOH B 10 310 87 HOH HOH . T 9 HOH B 11 311 24 HOH HOH . T 9 HOH B 12 312 80 HOH HOH . T 9 HOH B 13 313 128 HOH HOH . T 9 HOH B 14 314 90 HOH HOH . T 9 HOH B 15 315 127 HOH HOH . T 9 HOH B 16 316 23 HOH HOH . T 9 HOH B 17 317 56 HOH HOH . T 9 HOH B 18 318 13 HOH HOH . T 9 HOH B 19 319 131 HOH HOH . T 9 HOH B 20 320 129 HOH HOH . U 9 HOH C 1 101 58 HOH HOH . V 9 HOH D 1 401 99 HOH HOH . V 9 HOH D 2 402 10 HOH HOH . V 9 HOH D 3 403 92 HOH HOH . V 9 HOH D 4 404 12 HOH HOH . V 9 HOH D 5 405 98 HOH HOH . V 9 HOH D 6 406 103 HOH HOH . V 9 HOH D 7 407 95 HOH HOH . V 9 HOH D 8 408 162 HOH HOH . V 9 HOH D 9 409 97 HOH HOH . V 9 HOH D 10 410 28 HOH HOH . V 9 HOH D 11 411 100 HOH HOH . V 9 HOH D 12 412 59 HOH HOH . V 9 HOH D 13 413 22 HOH HOH . V 9 HOH D 14 414 63 HOH HOH . V 9 HOH D 15 415 114 HOH HOH . V 9 HOH D 16 416 107 HOH HOH . V 9 HOH D 17 417 28 HOH HOH . V 9 HOH D 18 418 7 HOH HOH . V 9 HOH D 19 419 47 HOH HOH . V 9 HOH D 20 420 115 HOH HOH . V 9 HOH D 21 421 47 HOH HOH . V 9 HOH D 22 422 48 HOH HOH . V 9 HOH D 23 423 31 HOH HOH . V 9 HOH D 24 424 91 HOH HOH . V 9 HOH D 25 425 9 HOH HOH . V 9 HOH D 26 426 50 HOH HOH . V 9 HOH D 27 427 106 HOH HOH . V 9 HOH D 28 428 9 HOH HOH . V 9 HOH D 29 429 22 HOH HOH . V 9 HOH D 30 430 135 HOH HOH . V 9 HOH D 31 431 60 HOH HOH . V 9 HOH D 32 432 105 HOH HOH . V 9 HOH D 33 433 13 HOH HOH . V 9 HOH D 34 434 50 HOH HOH . V 9 HOH D 35 435 78 HOH HOH . V 9 HOH D 36 436 120 HOH HOH . V 9 HOH D 37 437 14 HOH HOH . V 9 HOH D 38 438 26 HOH HOH . V 9 HOH D 39 439 42 HOH HOH . V 9 HOH D 40 440 29 HOH HOH . V 9 HOH D 41 441 53 HOH HOH . V 9 HOH D 42 442 130 HOH HOH . V 9 HOH D 43 443 66 HOH HOH . V 9 HOH D 44 444 32 HOH HOH . V 9 HOH D 45 445 109 HOH HOH . V 9 HOH D 46 446 232 HOH HOH . V 9 HOH D 47 447 52 HOH HOH . V 9 HOH D 48 448 108 HOH HOH . V 9 HOH D 49 449 65 HOH HOH . V 9 HOH D 50 450 15 HOH HOH . V 9 HOH D 51 451 77 HOH HOH . V 9 HOH D 52 452 131 HOH HOH . W 9 HOH E 1 301 137 HOH HOH . W 9 HOH E 2 302 136 HOH HOH . W 9 HOH E 3 303 34 HOH HOH . W 9 HOH E 4 304 1 HOH HOH . W 9 HOH E 5 305 23 HOH HOH . W 9 HOH E 6 306 8 HOH HOH . W 9 HOH E 7 307 110 HOH HOH . W 9 HOH E 8 308 136 HOH HOH . W 9 HOH E 9 309 53 HOH HOH . W 9 HOH E 10 310 32 HOH HOH . W 9 HOH E 11 311 31 HOH HOH . W 9 HOH E 12 312 133 HOH HOH . W 9 HOH E 13 313 134 HOH HOH . W 9 HOH E 14 314 96 HOH HOH . W 9 HOH E 15 315 84 HOH HOH . W 9 HOH E 16 316 106 HOH HOH . W 9 HOH E 17 317 48 HOH HOH . W 9 HOH E 18 318 7 HOH HOH . W 9 HOH E 19 319 111 HOH HOH . W 9 HOH E 20 320 11 HOH HOH . W 9 HOH E 21 321 90 HOH HOH . W 9 HOH E 22 322 43 HOH HOH . W 9 HOH E 23 323 104 HOH HOH . W 9 HOH E 24 324 46 HOH HOH . W 9 HOH E 25 325 49 HOH HOH . W 9 HOH E 26 326 29 HOH HOH . W 9 HOH E 27 327 36 HOH HOH . W 9 HOH E 28 328 27 HOH HOH . W 9 HOH E 29 329 71 HOH HOH . W 9 HOH E 30 330 240 HOH HOH . W 9 HOH E 31 331 141 HOH HOH . W 9 HOH E 32 332 61 HOH HOH . W 9 HOH E 33 333 233 HOH HOH . W 9 HOH E 34 334 241 HOH HOH . X 9 HOH F 1 101 11 HOH HOH . X 9 HOH F 2 102 17 HOH HOH . X 9 HOH F 3 103 102 HOH HOH . X 9 HOH F 4 104 93 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OH2 1PE . . . H 5 -2.485 -5.207 18.859 1 72.29 ? OH2 1PE 302 A 1 HETATM 2 C C12 1PE . . . H 5 -2.502 -4.205 19.894 1 70.62 ? C12 1PE 302 A 1 HETATM 3 C C22 1PE . . . H 5 -2.578 -4.842 21.28 1 69.57 ? C22 1PE 302 A 1 HETATM 4 O OH3 1PE . . . H 5 -1.482 -4.424 22.097 1 64.87 ? OH3 1PE 302 A 1 HETATM 5 C C13 1PE . . . H 5 0.824 -5.143 22.492 1 65.2 ? C13 1PE 302 A 1 HETATM 6 C C23 1PE . . . H 5 -0.66 -5.528 22.529 1 62.94 ? C23 1PE 302 A 1 HETATM 7 O OH4 1PE . . . H 5 1.492 -5.507 23.717 1 54.4 ? OH4 1PE 302 A 1 HETATM 8 C C14 1PE . . . H 5 2.75 -4.689 25.604 1 48.8 ? C14 1PE 302 A 1 HETATM 9 C C24 1PE . . . H 5 2.37 -4.466 24.158 1 51.67 ? C24 1PE 302 A 1 HETATM 10 O OH5 1PE . . . H 5 2.976 -3.501 26.384 1 53.99 ? OH5 1PE 302 A 1 HETATM 11 C C15 1PE . . . H 5 2.902 -3.061 28.784 1 53.53 ? C15 1PE 302 A 1 HETATM 12 C C25 1PE . . . H 5 2.129 -3.457 27.558 1 53.12 ? C25 1PE 302 A 1 HETATM 13 O OH6 1PE . . . H 5 3.578 -4.119 29.464 1 53.33 ? OH6 1PE 302 A 1 HETATM 14 C C16 1PE . . . H 5 4.426 -4.798 31.734 1 55.37 ? C16 1PE 302 A 1 HETATM 15 C C26 1PE . . . H 5 4.105 -3.67 30.746 1 55.53 ? C26 1PE 302 A 1 HETATM 16 O OH7 1PE . . . H 5 3.904 -4.525 33.058 1 57.73 ? OH7 1PE 302 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 31 _model_server_stats.query_time_ms 332 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 16 #