data_6ULV # _model_server_result.job_id BT9o0yguvw5PjYYhI4GzCg _model_server_result.datetime_utc '2024-10-19 03:56:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ulv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":201}' # _entry.id 6ULV # _exptl.entry_id 6ULV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 126.904 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IODIDE ION' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6ULV _cell.length_a 112.288 _cell.length_b 112.288 _cell.length_c 235.579 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ULV _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall 'P 65 2 (x,y,z+1/12)' _symmetry.space_group_name_H-M 'P 65 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,G,H,I,K,M,N,Q,S,U 1 1 B,D,F,J,L,O,P,R,T,V 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 H N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 E C ACE 1 E ACE 0 1_555 E N TRP 2 E TRP 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale2 E CH3 ACE 1 E ACE 0 1_555 E SG CYS 6 E CYS 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? covale ? covale3 E C TRP 2 E TRP 1 1_555 E N ALY 3 E ALY 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale4 E C ALY 3 E ALY 2 1_555 E N ASN 4 E ASN 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale5 E C LEU 8 E LEU 7 1_555 E N ALY 9 E ALY 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale6 E C ALY 9 E ALY 8 1_555 E N ARG 10 E ARG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale7 E C ARG 10 E ARG 9 1_555 E N ALY 11 E ALY 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale8 E C ALY 11 E ALY 10 1_555 E N LEU 12 E LEU 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale9 E C ARG 15 E ARG 14 1_555 E N NH2 16 E NH2 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? covale ? covale10 F C ACE 1 G ACE 0 1_555 F N TRP 2 G TRP 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale11 F CH3 ACE 1 G ACE 0 1_555 F SG CYS 6 G CYS 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.767 ? covale ? covale12 F C TRP 2 G TRP 1 1_555 F N ALY 3 G ALY 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale13 F C ALY 3 G ALY 2 1_555 F N ASN 4 G ASN 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale14 F C LEU 8 G LEU 7 1_555 F N ALY 9 G ALY 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale15 F C ALY 9 G ALY 8 1_555 F N ARG 10 G ARG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale16 F C ARG 10 G ARG 9 1_555 F N ALY 11 G ALY 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale17 F C ALY 11 G ALY 10 1_555 F N LEU 12 G LEU 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale18 F C ARG 15 G ARG 14 1_555 F N NH2 16 G NH2 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? # _chem_comp.formula 'I -1' _chem_comp.formula_weight 126.904 _chem_comp.id IOD _chem_comp.mon_nstd_flag . _chem_comp.name 'IODIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6ULV _atom_sites.fract_transf_matrix[1][1] 0.008906 _atom_sites.fract_transf_matrix[1][2] 0.005142 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010283 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004245 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 IOD A 1 201 5 IOD IOD . H 3 IOD A 1 202 7 IOD IOD . I 4 B3P A 1 203 1 B3P B3P . J 3 IOD B 1 201 6 IOD IOD . K 3 IOD C 1 201 2 IOD IOD . L 3 IOD D 1 201 1 IOD IOD . M 3 IOD E 1 101 3 IOD IOD . N 5 GOL E 1 102 2 GOL GOL . O 3 IOD G 1 101 4 IOD IOD . P 5 GOL G 1 102 3 GOL GOL . Q 6 HOH A 1 301 257 HOH HOH . Q 6 HOH A 2 302 256 HOH HOH . Q 6 HOH A 3 303 242 HOH HOH . Q 6 HOH A 4 304 166 HOH HOH . Q 6 HOH A 5 305 76 HOH HOH . Q 6 HOH A 6 306 137 HOH HOH . Q 6 HOH A 7 307 66 HOH HOH . Q 6 HOH A 8 308 69 HOH HOH . Q 6 HOH A 9 309 18 HOH HOH . Q 6 HOH A 10 310 90 HOH HOH . Q 6 HOH A 11 311 7 HOH HOH . Q 6 HOH A 12 312 63 HOH HOH . Q 6 HOH A 13 313 80 HOH HOH . Q 6 HOH A 14 314 37 HOH HOH . Q 6 HOH A 15 315 264 HOH HOH . Q 6 HOH A 16 316 17 HOH HOH . Q 6 HOH A 17 317 30 HOH HOH . Q 6 HOH A 18 318 190 HOH HOH . Q 6 HOH A 19 319 99 HOH HOH . Q 6 HOH A 20 320 74 HOH HOH . Q 6 HOH A 21 321 57 HOH HOH . Q 6 HOH A 22 322 233 HOH HOH . Q 6 HOH A 23 323 184 HOH HOH . Q 6 HOH A 24 324 209 HOH HOH . Q 6 HOH A 25 325 29 HOH HOH . Q 6 HOH A 26 326 147 HOH HOH . Q 6 HOH A 27 327 27 HOH HOH . Q 6 HOH A 28 328 25 HOH HOH . Q 6 HOH A 29 329 2 HOH HOH . Q 6 HOH A 30 330 9 HOH HOH . Q 6 HOH A 31 331 15 HOH HOH . Q 6 HOH A 32 332 135 HOH HOH . Q 6 HOH A 33 333 10 HOH HOH . Q 6 HOH A 34 334 165 HOH HOH . Q 6 HOH A 35 335 100 HOH HOH . Q 6 HOH A 36 336 123 HOH HOH . Q 6 HOH A 37 337 241 HOH HOH . Q 6 HOH A 38 338 262 HOH HOH . Q 6 HOH A 39 339 107 HOH HOH . Q 6 HOH A 40 340 132 HOH HOH . Q 6 HOH A 41 341 173 HOH HOH . Q 6 HOH A 42 342 218 HOH HOH . Q 6 HOH A 43 343 112 HOH HOH . Q 6 HOH A 44 344 81 HOH HOH . Q 6 HOH A 45 345 116 HOH HOH . Q 6 HOH A 46 346 109 HOH HOH . Q 6 HOH A 47 347 140 HOH HOH . Q 6 HOH A 48 348 34 HOH HOH . Q 6 HOH A 49 349 143 HOH HOH . Q 6 HOH A 50 350 278 HOH HOH . Q 6 HOH A 51 351 16 HOH HOH . Q 6 HOH A 52 352 91 HOH HOH . Q 6 HOH A 53 353 217 HOH HOH . Q 6 HOH A 54 354 260 HOH HOH . Q 6 HOH A 55 355 108 HOH HOH . Q 6 HOH A 56 356 128 HOH HOH . Q 6 HOH A 57 357 223 HOH HOH . Q 6 HOH A 58 358 251 HOH HOH . Q 6 HOH A 59 359 141 HOH HOH . R 6 HOH B 1 301 71 HOH HOH . R 6 HOH B 2 302 36 HOH HOH . R 6 HOH B 3 303 93 HOH HOH . R 6 HOH B 4 304 19 HOH HOH . R 6 HOH B 5 305 13 HOH HOH . R 6 HOH B 6 306 253 HOH HOH . R 6 HOH B 7 307 43 HOH HOH . R 6 HOH B 8 308 60 HOH HOH . R 6 HOH B 9 309 153 HOH HOH . R 6 HOH B 10 310 35 HOH HOH . R 6 HOH B 11 311 8 HOH HOH . R 6 HOH B 12 312 191 HOH HOH . R 6 HOH B 13 313 248 HOH HOH . R 6 HOH B 14 314 224 HOH HOH . R 6 HOH B 15 315 86 HOH HOH . R 6 HOH B 16 316 244 HOH HOH . R 6 HOH B 17 317 5 HOH HOH . R 6 HOH B 18 318 103 HOH HOH . R 6 HOH B 19 319 62 HOH HOH . R 6 HOH B 20 320 220 HOH HOH . R 6 HOH B 21 321 129 HOH HOH . R 6 HOH B 22 322 98 HOH HOH . R 6 HOH B 23 323 82 HOH HOH . R 6 HOH B 24 324 221 HOH HOH . R 6 HOH B 25 325 121 HOH HOH . R 6 HOH B 26 326 50 HOH HOH . R 6 HOH B 27 327 73 HOH HOH . R 6 HOH B 28 328 96 HOH HOH . R 6 HOH B 29 329 194 HOH HOH . R 6 HOH B 30 330 51 HOH HOH . R 6 HOH B 31 331 277 HOH HOH . R 6 HOH B 32 332 78 HOH HOH . R 6 HOH B 33 333 14 HOH HOH . R 6 HOH B 34 334 72 HOH HOH . R 6 HOH B 35 335 180 HOH HOH . R 6 HOH B 36 336 101 HOH HOH . R 6 HOH B 37 337 75 HOH HOH . R 6 HOH B 38 338 46 HOH HOH . R 6 HOH B 39 339 189 HOH HOH . R 6 HOH B 40 340 171 HOH HOH . R 6 HOH B 41 341 102 HOH HOH . R 6 HOH B 42 342 148 HOH HOH . R 6 HOH B 43 343 114 HOH HOH . R 6 HOH B 44 344 26 HOH HOH . R 6 HOH B 45 345 267 HOH HOH . R 6 HOH B 46 346 231 HOH HOH . R 6 HOH B 47 347 162 HOH HOH . R 6 HOH B 48 348 53 HOH HOH . R 6 HOH B 49 349 266 HOH HOH . R 6 HOH B 50 350 119 HOH HOH . R 6 HOH B 51 351 160 HOH HOH . R 6 HOH B 52 352 170 HOH HOH . R 6 HOH B 53 353 215 HOH HOH . R 6 HOH B 54 354 150 HOH HOH . R 6 HOH B 55 355 250 HOH HOH . R 6 HOH B 56 356 105 HOH HOH . R 6 HOH B 57 357 167 HOH HOH . R 6 HOH B 58 358 222 HOH HOH . R 6 HOH B 59 359 178 HOH HOH . R 6 HOH B 60 360 157 HOH HOH . R 6 HOH B 61 361 238 HOH HOH . R 6 HOH B 62 362 263 HOH HOH . R 6 HOH B 63 363 133 HOH HOH . R 6 HOH B 64 364 234 HOH HOH . S 6 HOH C 1 301 58 HOH HOH . S 6 HOH C 2 302 92 HOH HOH . S 6 HOH C 3 303 156 HOH HOH . S 6 HOH C 4 304 146 HOH HOH . S 6 HOH C 5 305 44 HOH HOH . S 6 HOH C 6 306 47 HOH HOH . S 6 HOH C 7 307 41 HOH HOH . S 6 HOH C 8 308 152 HOH HOH . S 6 HOH C 9 309 88 HOH HOH . S 6 HOH C 10 310 187 HOH HOH . S 6 HOH C 11 311 115 HOH HOH . S 6 HOH C 12 312 38 HOH HOH . S 6 HOH C 13 313 42 HOH HOH . S 6 HOH C 14 314 158 HOH HOH . S 6 HOH C 15 315 261 HOH HOH . S 6 HOH C 16 316 52 HOH HOH . S 6 HOH C 17 317 56 HOH HOH . S 6 HOH C 18 318 196 HOH HOH . S 6 HOH C 19 319 45 HOH HOH . S 6 HOH C 20 320 149 HOH HOH . S 6 HOH C 21 321 274 HOH HOH . S 6 HOH C 22 322 65 HOH HOH . S 6 HOH C 23 323 131 HOH HOH . S 6 HOH C 24 324 249 HOH HOH . S 6 HOH C 25 325 104 HOH HOH . S 6 HOH C 26 326 213 HOH HOH . S 6 HOH C 27 327 247 HOH HOH . S 6 HOH C 28 328 142 HOH HOH . S 6 HOH C 29 329 111 HOH HOH . S 6 HOH C 30 330 151 HOH HOH . S 6 HOH C 31 331 276 HOH HOH . S 6 HOH C 32 332 1 HOH HOH . S 6 HOH C 33 333 255 HOH HOH . S 6 HOH C 34 334 117 HOH HOH . S 6 HOH C 35 335 228 HOH HOH . S 6 HOH C 36 336 159 HOH HOH . S 6 HOH C 37 337 269 HOH HOH . S 6 HOH C 38 338 163 HOH HOH . S 6 HOH C 39 339 127 HOH HOH . T 6 HOH D 1 301 83 HOH HOH . T 6 HOH D 2 302 31 HOH HOH . T 6 HOH D 3 303 67 HOH HOH . T 6 HOH D 4 304 177 HOH HOH . T 6 HOH D 5 305 20 HOH HOH . T 6 HOH D 6 306 11 HOH HOH . T 6 HOH D 7 307 12 HOH HOH . T 6 HOH D 8 308 279 HOH HOH . T 6 HOH D 9 309 33 HOH HOH . T 6 HOH D 10 310 192 HOH HOH . T 6 HOH D 11 311 210 HOH HOH . T 6 HOH D 12 312 118 HOH HOH . T 6 HOH D 13 313 97 HOH HOH . T 6 HOH D 14 314 54 HOH HOH . T 6 HOH D 15 315 175 HOH HOH . T 6 HOH D 16 316 94 HOH HOH . T 6 HOH D 17 317 195 HOH HOH . T 6 HOH D 18 318 155 HOH HOH . T 6 HOH D 19 319 154 HOH HOH . T 6 HOH D 20 320 49 HOH HOH . T 6 HOH D 21 321 138 HOH HOH . T 6 HOH D 22 322 205 HOH HOH . T 6 HOH D 23 323 139 HOH HOH . T 6 HOH D 24 324 227 HOH HOH . T 6 HOH D 25 325 130 HOH HOH . T 6 HOH D 26 326 113 HOH HOH . T 6 HOH D 27 327 87 HOH HOH . T 6 HOH D 28 328 64 HOH HOH . T 6 HOH D 29 329 124 HOH HOH . T 6 HOH D 30 330 106 HOH HOH . T 6 HOH D 31 331 126 HOH HOH . T 6 HOH D 32 332 89 HOH HOH . T 6 HOH D 33 333 230 HOH HOH . T 6 HOH D 34 334 68 HOH HOH . T 6 HOH D 35 335 23 HOH HOH . T 6 HOH D 36 336 225 HOH HOH . T 6 HOH D 37 337 61 HOH HOH . T 6 HOH D 38 338 265 HOH HOH . T 6 HOH D 39 339 268 HOH HOH . T 6 HOH D 40 340 55 HOH HOH . T 6 HOH D 41 341 24 HOH HOH . T 6 HOH D 42 342 237 HOH HOH . T 6 HOH D 43 343 246 HOH HOH . T 6 HOH D 44 344 174 HOH HOH . T 6 HOH D 45 345 164 HOH HOH . T 6 HOH D 46 346 236 HOH HOH . T 6 HOH D 47 347 193 HOH HOH . T 6 HOH D 48 348 243 HOH HOH . T 6 HOH D 49 349 270 HOH HOH . T 6 HOH D 50 350 273 HOH HOH . T 6 HOH D 51 351 84 HOH HOH . T 6 HOH D 52 352 39 HOH HOH . T 6 HOH D 53 353 168 HOH HOH . T 6 HOH D 54 354 79 HOH HOH . T 6 HOH D 55 355 226 HOH HOH . T 6 HOH D 56 356 161 HOH HOH . U 6 HOH E 1 201 40 HOH HOH . U 6 HOH E 2 202 70 HOH HOH . U 6 HOH E 3 203 3 HOH HOH . U 6 HOH E 4 204 48 HOH HOH . U 6 HOH E 5 205 28 HOH HOH . U 6 HOH E 6 206 125 HOH HOH . U 6 HOH E 7 207 120 HOH HOH . U 6 HOH E 8 208 4 HOH HOH . U 6 HOH E 9 209 203 HOH HOH . U 6 HOH E 10 210 281 HOH HOH . U 6 HOH E 11 211 235 HOH HOH . U 6 HOH E 12 212 145 HOH HOH . U 6 HOH E 13 213 219 HOH HOH . V 6 HOH G 1 201 59 HOH HOH . V 6 HOH G 2 202 85 HOH HOH . V 6 HOH G 3 203 204 HOH HOH . V 6 HOH G 4 204 77 HOH HOH . V 6 HOH G 5 205 211 HOH HOH . V 6 HOH G 6 206 21 HOH HOH . V 6 HOH G 7 207 252 HOH HOH . V 6 HOH G 8 208 95 HOH HOH . V 6 HOH G 9 209 144 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol I _atom_site.label_atom_id I _atom_site.label_comp_id IOD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id L _atom_site.label_entity_id 3 _atom_site.Cartn_x -46.92 _atom_site.Cartn_y 34.382 _atom_site.Cartn_z 4.213 _atom_site.occupancy 0.83 _atom_site.B_iso_or_equiv 30.26 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id I _atom_site.auth_comp_id IOD _atom_site.auth_seq_id 201 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 347 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #