data_6UME # _model_server_result.job_id w8yL1thGwsEztwyLDAcQGg _model_server_result.datetime_utc '2024-10-19 22:39:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ume # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 6UME # _exptl.entry_id 6UME _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 536.632 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(pyridin-3-yl)-N-(5-{4-[(5-{[(pyridin-3-yl)acetyl]amino}-1,3,4-thiadiazol-2-yl)amino]piperidin-1-yl}-1,3,4-thiadiazol-2-yl)acetamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6UME _cell.length_a 100.872 _cell.length_b 139.088 _cell.length_c 178.237 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6UME _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N # _chem_comp.formula 'C23 H24 N10 O2 S2' _chem_comp.formula_weight 536.632 _chem_comp.id QAJ _chem_comp.mon_nstd_flag . _chem_comp.name 2-(pyridin-3-yl)-N-(5-{4-[(5-{[(pyridin-3-yl)acetyl]amino}-1,3,4-thiadiazol-2-yl)amino]piperidin-1-yl}-1,3,4-thiadiazol-2-yl)acetamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N8 C16 QAJ doub 275 n y N8 N7 QAJ sing 276 n y N9 C16 QAJ sing 277 n n N9 C17 QAJ sing 278 n n C18 C19 QAJ sing 279 n n C18 C17 QAJ sing 280 n n C23 N10 QAJ doub 281 n y C23 C19 QAJ sing 282 n y C16 S2 QAJ sing 283 n y N7 C15 QAJ doub 284 n y N10 C22 QAJ sing 285 n y C19 C20 QAJ doub 286 n y C17 O2 QAJ doub 287 n n C22 C21 QAJ doub 288 n y C20 C21 QAJ sing 289 n y C4 C3 QAJ sing 290 n n C4 C5 QAJ sing 291 n n C15 S2 QAJ sing 292 n y C15 N1 QAJ sing 293 n n N2 C5 QAJ sing 294 n n N2 C6 QAJ sing 295 n n C3 N1 QAJ sing 296 n n C5 C1 QAJ sing 297 n n C1 C2 QAJ sing 298 n n N1 C2 QAJ sing 299 n n S1 C6 QAJ sing 300 n y S1 C7 QAJ sing 301 n y C6 N3 QAJ doub 302 n y O1 C8 QAJ doub 303 n n N6 C14 QAJ doub 304 n y N6 C13 QAJ sing 305 n y C14 C10 QAJ sing 306 n y N3 N4 QAJ sing 307 n y C8 N5 QAJ sing 308 n n C8 C9 QAJ sing 309 n n C7 N5 QAJ sing 310 n n C7 N4 QAJ doub 311 n y C13 C12 QAJ doub 312 n y C10 C9 QAJ sing 313 n n C10 C11 QAJ doub 314 n y C12 C11 QAJ sing 315 n y C4 H1 QAJ sing 316 n n C4 H2 QAJ sing 317 n n C5 H3 QAJ sing 318 n n C13 H4 QAJ sing 319 n n C20 H5 QAJ sing 320 n n C21 H6 QAJ sing 321 n n C22 H7 QAJ sing 322 n n C1 H8 QAJ sing 323 n n C1 H9 QAJ sing 324 n n C11 H10 QAJ sing 325 n n C12 H11 QAJ sing 326 n n C14 H12 QAJ sing 327 n n C18 H13 QAJ sing 328 n n C18 H14 QAJ sing 329 n n C2 H15 QAJ sing 330 n n C2 H16 QAJ sing 331 n n C23 H17 QAJ sing 332 n n C3 H18 QAJ sing 333 n n C3 H19 QAJ sing 334 n n C9 H20 QAJ sing 335 n n C9 H21 QAJ sing 336 n n N2 H22 QAJ sing 337 n n N5 H23 QAJ sing 338 n n N9 H24 QAJ sing 339 n n # _atom_sites.entry_id 6UME _atom_sites.fract_transf_matrix[1][1] 0.009914 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00719 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005611 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 QAJ A 1 601 1 QAJ U61 . F 2 QAJ B 1 601 2 QAJ U61 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 QAJ . . . E 2 -27.065 23.069 1.035 1 74.76 ? N1 QAJ 601 A 1 HETATM 2 N N3 QAJ . . . E 2 -31.875 24.543 -1.063 1 68.9 ? N3 QAJ 601 A 1 HETATM 3 C C4 QAJ . . . E 2 -29.152 24.003 0.081 1 70.22 ? C4 QAJ 601 A 1 HETATM 4 C C5 QAJ . . . E 2 -30.136 23.067 0.809 1 65.65 ? C5 QAJ 601 A 1 HETATM 5 C C6 QAJ . . . E 2 -32.065 24.456 0.276 1 65.63 ? C6 QAJ 601 A 1 HETATM 6 C C7 QAJ . . . E 2 -33.625 25.997 -1.035 1 70.92 ? C7 QAJ 601 A 1 HETATM 7 C C8 QAJ . . . E 2 -35.435 27.691 -0.724 1 64.43 ? C8 QAJ 601 A 1 HETATM 8 C C10 QAJ . . . E 2 -35.979 29.919 -1.221 1 91.6 ? C10 QAJ 601 A 1 HETATM 9 C C13 QAJ . . . E 2 -35.006 32.513 -1.118 1 100.18 ? C13 QAJ 601 A 1 HETATM 10 C C15 QAJ . . . E 2 -26.407 24.082 1.838 1 68.07 ? C15 QAJ 601 A 1 HETATM 11 C C17 QAJ . . . E 2 -22.738 27.13 2.91 1 81.42 ? C17 QAJ 601 A 1 HETATM 12 C C20 QAJ . . . E 2 -22.672 30.654 2.646 1 89.35 ? C20 QAJ 601 A 1 HETATM 13 C C21 QAJ . . . E 2 -23.412 31.788 2.969 1 94.43 ? C21 QAJ 601 A 1 HETATM 14 C C22 QAJ . . . E 2 -24.101 31.836 4.194 1 95.05 ? C22 QAJ 601 A 1 HETATM 15 C C1 QAJ . . . E 2 -29.338 22.771 2.022 1 79.93 ? C1 QAJ 601 A 1 HETATM 16 C C11 QAJ . . . E 2 -35.045 30.362 -2.167 1 93.69 ? C11 QAJ 601 A 1 HETATM 17 C C12 QAJ . . . E 2 -34.56 31.663 -2.127 1 95.98 ? C12 QAJ 601 A 1 HETATM 18 C C14 QAJ . . . E 2 -36.352 30.831 -0.232 1 101.91 ? C14 QAJ 601 A 1 HETATM 19 C C16 QAJ . . . E 2 -25.023 25.997 2.965 1 77.66 ? C16 QAJ 601 A 1 HETATM 20 C C18 QAJ . . . E 2 -21.838 28.332 3.204 1 81.96 ? C18 QAJ 601 A 1 HETATM 21 C C19 QAJ . . . E 2 -22.616 29.569 3.528 1 92.87 ? C19 QAJ 601 A 1 HETATM 22 C C2 QAJ . . . E 2 -27.974 22.127 1.692 1 85.57 ? C2 QAJ 601 A 1 HETATM 23 C C23 QAJ . . . E 2 -23.345 29.706 4.737 1 98.04 ? C23 QAJ 601 A 1 HETATM 24 C C3 QAJ . . . E 2 -27.768 23.372 -0.199 1 71.47 ? C3 QAJ 601 A 1 HETATM 25 C C9 QAJ . . . E 2 -36.486 28.576 -1.218 1 78.97 ? C9 QAJ 601 A 1 HETATM 26 N N10 QAJ . . . E 2 -24.07 30.799 5.075 1 97.15 ? N10 QAJ 601 A 1 HETATM 27 N N2 QAJ . . . E 2 -31.356 23.72 1.164 1 58.26 ? N2 QAJ 601 A 1 HETATM 28 N N4 QAJ . . . E 2 -32.693 25.338 -1.739 1 72.84 ? N4 QAJ 601 A 1 HETATM 29 N N5 QAJ . . . E 2 -34.627 26.874 -1.548 1 64.37 ? N5 QAJ 601 A 1 HETATM 30 N N6 QAJ . . . E 2 -35.897 32.105 -0.167 1 106.81 ? N6 QAJ 601 A 1 HETATM 31 N N7 QAJ . . . E 2 -26.425 24.195 3.184 1 67.12 ? N7 QAJ 601 A 1 HETATM 32 N N8 QAJ . . . E 2 -25.713 25.172 3.779 1 74.09 ? N8 QAJ 601 A 1 HETATM 33 N N9 QAJ . . . E 2 -24.175 27.108 3.238 1 75.3 ? N9 QAJ 601 A 1 HETATM 34 O O1 QAJ . . . E 2 -35.237 27.721 0.455 1 64.79 ? O1 QAJ 601 A 1 HETATM 35 O O2 QAJ . . . E 2 -22.224 26.164 2.371 1 99.58 ? O2 QAJ 601 A 1 HETATM 36 S S1 QAJ . . . E 2 -33.439 25.511 0.723 1 57.74 ? S1 QAJ 601 A 1 HETATM 37 S S2 QAJ . . . E 2 -25.327 25.407 1.253 1 68.01 ? S2 QAJ 601 A 1 # _model_server_stats.io_time_ms 149 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 37 #