data_6UMF # _model_server_result.job_id sTWOiUBj1kBsRzZgTWG_bg _model_server_result.datetime_utc '2024-12-26 19:05:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6umf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 6UMF # _exptl.entry_id 6UMF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 417.508 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(5-{[1-(5-amino-1,3,4-thiadiazol-2-yl)piperidin-4-yl]oxy}-1,3,4-thiadiazol-2-yl)-2-phenylacetamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.914 _cell.angle_gamma 90 _cell.entry_id 6UMF _cell.length_a 49.729 _cell.length_b 138.977 _cell.length_c 177.025 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6UMF _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N # _chem_comp.formula 'C17 H19 N7 O2 S2' _chem_comp.formula_weight 417.508 _chem_comp.id QAM _chem_comp.mon_nstd_flag . _chem_comp.name N-(5-{[1-(5-amino-1,3,4-thiadiazol-2-yl)piperidin-4-yl]oxy}-1,3,4-thiadiazol-2-yl)-2-phenylacetamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C19 C20 QAM doub 277 n y C19 C18 QAM sing 278 n y C20 C15 QAM sing 279 n y C18 C17 QAM doub 280 n y C15 C14 QAM sing 281 n n C15 C16 QAM doub 282 n y C17 C16 QAM sing 283 n y O21 C13 QAM doub 284 n n C14 C13 QAM sing 285 n n N10 N09 QAM sing 286 n y N10 C11 QAM doub 287 n y C13 N12 QAM sing 288 n n N09 C08 QAM doub 289 n y N12 C11 QAM sing 290 n n C11 S22 QAM sing 291 n y C04 C05 QAM sing 292 n n C04 N03 QAM sing 293 n n C08 S22 QAM sing 294 n y C08 O07 QAM sing 295 n n N24 N25 QAM sing 296 n y N24 C23 QAM doub 297 n y C05 C06 QAM sing 298 n n C06 O07 QAM sing 299 n n C06 C01 QAM sing 300 n n N03 C02 QAM sing 301 n n N03 C23 QAM sing 302 n n N25 C26 QAM doub 303 n y C02 C01 QAM sing 304 n n C23 S28 QAM sing 305 n y C26 S28 QAM sing 306 n y C26 N27 QAM sing 307 n n N12 H1 QAM sing 308 n n C17 H2 QAM sing 309 n n C20 H3 QAM sing 310 n n C01 H4 QAM sing 311 n n C01 H5 QAM sing 312 n n C02 H6 QAM sing 313 n n C02 H7 QAM sing 314 n n C04 H8 QAM sing 315 n n C04 H9 QAM sing 316 n n C05 H10 QAM sing 317 n n C05 H11 QAM sing 318 n n C06 H12 QAM sing 319 n n C14 H13 QAM sing 320 n n C14 H14 QAM sing 321 n n C16 H15 QAM sing 322 n n C18 H16 QAM sing 323 n n C19 H17 QAM sing 324 n n N27 H18 QAM sing 325 n n N27 H19 QAM sing 326 n n # _atom_sites.entry_id 6UMF _atom_sites.fract_transf_matrix[1][1] 0.020109 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001376 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007195 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005662 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 QAM B 1 601 1 QAM LIG . F 2 QAM C 1 601 2 QAM LIG . G 3 HOH A 1 601 79 HOH HOH . G 3 HOH A 2 602 107 HOH HOH . G 3 HOH A 3 603 8 HOH HOH . G 3 HOH A 4 604 63 HOH HOH . G 3 HOH A 5 605 48 HOH HOH . G 3 HOH A 6 606 4 HOH HOH . G 3 HOH A 7 607 86 HOH HOH . G 3 HOH A 8 608 16 HOH HOH . G 3 HOH A 9 609 60 HOH HOH . G 3 HOH A 10 610 37 HOH HOH . G 3 HOH A 11 611 27 HOH HOH . G 3 HOH A 12 612 18 HOH HOH . G 3 HOH A 13 613 62 HOH HOH . G 3 HOH A 14 614 34 HOH HOH . G 3 HOH A 15 615 1 HOH HOH . G 3 HOH A 16 616 52 HOH HOH . G 3 HOH A 17 617 94 HOH HOH . G 3 HOH A 18 618 47 HOH HOH . G 3 HOH A 19 619 110 HOH HOH . G 3 HOH A 20 620 93 HOH HOH . G 3 HOH A 21 621 84 HOH HOH . G 3 HOH A 22 622 96 HOH HOH . G 3 HOH A 23 623 49 HOH HOH . H 3 HOH B 1 701 104 HOH HOH . H 3 HOH B 2 702 109 HOH HOH . H 3 HOH B 3 703 77 HOH HOH . H 3 HOH B 4 704 31 HOH HOH . H 3 HOH B 5 705 61 HOH HOH . H 3 HOH B 6 706 116 HOH HOH . H 3 HOH B 7 707 2 HOH HOH . H 3 HOH B 8 708 41 HOH HOH . H 3 HOH B 9 709 36 HOH HOH . H 3 HOH B 10 710 15 HOH HOH . H 3 HOH B 11 711 92 HOH HOH . H 3 HOH B 12 712 20 HOH HOH . H 3 HOH B 13 713 5 HOH HOH . H 3 HOH B 14 714 54 HOH HOH . H 3 HOH B 15 715 124 HOH HOH . H 3 HOH B 16 716 43 HOH HOH . H 3 HOH B 17 717 24 HOH HOH . H 3 HOH B 18 718 114 HOH HOH . H 3 HOH B 19 719 113 HOH HOH . H 3 HOH B 20 720 59 HOH HOH . H 3 HOH B 21 721 6 HOH HOH . H 3 HOH B 22 722 65 HOH HOH . H 3 HOH B 23 723 21 HOH HOH . H 3 HOH B 24 724 9 HOH HOH . H 3 HOH B 25 725 119 HOH HOH . H 3 HOH B 26 726 101 HOH HOH . H 3 HOH B 27 727 88 HOH HOH . H 3 HOH B 28 728 102 HOH HOH . H 3 HOH B 29 729 71 HOH HOH . H 3 HOH B 30 730 74 HOH HOH . H 3 HOH B 31 731 50 HOH HOH . H 3 HOH B 32 732 117 HOH HOH . H 3 HOH B 33 733 108 HOH HOH . H 3 HOH B 34 734 106 HOH HOH . I 3 HOH C 1 701 76 HOH HOH . I 3 HOH C 2 702 105 HOH HOH . I 3 HOH C 3 703 121 HOH HOH . I 3 HOH C 4 704 75 HOH HOH . I 3 HOH C 5 705 58 HOH HOH . I 3 HOH C 6 706 57 HOH HOH . I 3 HOH C 7 707 12 HOH HOH . I 3 HOH C 8 708 39 HOH HOH . I 3 HOH C 9 709 28 HOH HOH . I 3 HOH C 10 710 23 HOH HOH . I 3 HOH C 11 711 14 HOH HOH . I 3 HOH C 12 712 125 HOH HOH . I 3 HOH C 13 713 46 HOH HOH . I 3 HOH C 14 714 42 HOH HOH . I 3 HOH C 15 715 56 HOH HOH . I 3 HOH C 16 716 122 HOH HOH . I 3 HOH C 17 717 32 HOH HOH . I 3 HOH C 18 718 55 HOH HOH . I 3 HOH C 19 719 73 HOH HOH . I 3 HOH C 20 720 80 HOH HOH . I 3 HOH C 21 721 45 HOH HOH . I 3 HOH C 22 722 64 HOH HOH . I 3 HOH C 23 723 87 HOH HOH . I 3 HOH C 24 724 72 HOH HOH . I 3 HOH C 25 725 85 HOH HOH . I 3 HOH C 26 726 19 HOH HOH . I 3 HOH C 27 727 11 HOH HOH . I 3 HOH C 28 728 40 HOH HOH . I 3 HOH C 29 729 35 HOH HOH . I 3 HOH C 30 730 112 HOH HOH . I 3 HOH C 31 731 100 HOH HOH . I 3 HOH C 32 732 13 HOH HOH . I 3 HOH C 33 733 98 HOH HOH . J 3 HOH D 1 601 91 HOH HOH . J 3 HOH D 2 602 82 HOH HOH . J 3 HOH D 3 603 68 HOH HOH . J 3 HOH D 4 604 10 HOH HOH . J 3 HOH D 5 605 78 HOH HOH . J 3 HOH D 6 606 69 HOH HOH . J 3 HOH D 7 607 90 HOH HOH . J 3 HOH D 8 608 70 HOH HOH . J 3 HOH D 9 609 51 HOH HOH . J 3 HOH D 10 610 123 HOH HOH . J 3 HOH D 11 611 30 HOH HOH . J 3 HOH D 12 612 25 HOH HOH . J 3 HOH D 13 613 89 HOH HOH . J 3 HOH D 14 614 120 HOH HOH . J 3 HOH D 15 615 53 HOH HOH . J 3 HOH D 16 616 7 HOH HOH . J 3 HOH D 17 617 17 HOH HOH . J 3 HOH D 18 618 3 HOH HOH . J 3 HOH D 19 619 111 HOH HOH . J 3 HOH D 20 620 97 HOH HOH . J 3 HOH D 21 621 99 HOH HOH . J 3 HOH D 22 622 81 HOH HOH . J 3 HOH D 23 623 33 HOH HOH . J 3 HOH D 24 624 29 HOH HOH . J 3 HOH D 25 625 26 HOH HOH . J 3 HOH D 26 626 38 HOH HOH . J 3 HOH D 27 627 44 HOH HOH . J 3 HOH D 28 628 103 HOH HOH . J 3 HOH D 29 629 67 HOH HOH . J 3 HOH D 30 630 95 HOH HOH . J 3 HOH D 31 631 118 HOH HOH . J 3 HOH D 32 632 22 HOH HOH . J 3 HOH D 33 633 66 HOH HOH . J 3 HOH D 34 634 115 HOH HOH . J 3 HOH D 35 635 83 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N12 QAM . . . E 2 -2.27 -26.528 43.331 1 83.45 ? N12 QAM 601 B 1 HETATM 2 C C13 QAM . . . E 2 -0.893 -26.221 42.932 1 93.1 ? C13 QAM 601 B 1 HETATM 3 C C15 QAM . . . E 2 -0.72 -28.568 42.276 1 115.41 ? C15 QAM 601 B 1 HETATM 4 C C17 QAM . . . E 2 -1.561 -30.791 42.583 1 130.56 ? C17 QAM 601 B 1 HETATM 5 C C20 QAM . . . E 2 -1.39 -28.473 41.066 1 109.99 ? C20 QAM 601 B 1 HETATM 6 C C26 QAM . . . E 2 -12.521 -25.64 46.227 1 77.53 ? C26 QAM 601 B 1 HETATM 7 C C01 QAM . . . E 2 -6.892 -23.827 45.696 1 56.1 ? C01 QAM 601 B 1 HETATM 8 C C02 QAM . . . E 2 -7.971 -24.719 45.147 1 57.79 ? C02 QAM 601 B 1 HETATM 9 C C04 QAM . . . E 2 -9.038 -22.552 44.156 1 51.71 ? C04 QAM 601 B 1 HETATM 10 C C05 QAM . . . E 2 -7.744 -21.86 44.566 1 56.58 ? C05 QAM 601 B 1 HETATM 11 C C06 QAM . . . E 2 -6.692 -22.868 44.635 1 58.51 ? C06 QAM 601 B 1 HETATM 12 C C08 QAM . . . E 2 -4.69 -23.515 44.186 1 67.18 ? C08 QAM 601 B 1 HETATM 13 C C11 QAM . . . E 2 -3.269 -25.489 43.509 1 76.72 ? C11 QAM 601 B 1 HETATM 14 C C14 QAM . . . E 2 0.088 -27.373 42.764 1 102.83 ? C14 QAM 601 B 1 HETATM 15 C C16 QAM . . . E 2 -0.808 -29.72 43.038 1 123.13 ? C16 QAM 601 B 1 HETATM 16 C C18 QAM . . . E 2 -2.227 -30.69 41.375 1 116.47 ? C18 QAM 601 B 1 HETATM 17 C C19 QAM . . . E 2 -2.143 -29.539 40.605 1 106.92 ? C19 QAM 601 B 1 HETATM 18 C C23 QAM . . . E 2 -10.522 -24.514 45.155 1 71.2 ? C23 QAM 601 B 1 HETATM 19 N N03 QAM . . . E 2 -9.253 -23.923 44.834 1 59.23 ? N03 QAM 601 B 1 HETATM 20 N N09 QAM . . . E 2 -5.142 -24.251 43.171 1 68.08 ? N09 QAM 601 B 1 HETATM 21 N N10 QAM . . . E 2 -4.37 -25.323 42.787 1 66.56 ? N10 QAM 601 B 1 HETATM 22 N N24 QAM . . . E 2 -11.529 -24.788 44.344 1 75.4 ? N24 QAM 601 B 1 HETATM 23 N N25 QAM . . . E 2 -12.623 -25.388 44.924 1 82.62 ? N25 QAM 601 B 1 HETATM 24 N N27 QAM . . . E 2 -13.533 -26.266 47.071 1 60.98 ? N27 QAM 601 B 1 HETATM 25 O O07 QAM . . . E 2 -5.317 -22.401 44.733 1 61.62 ? O07 QAM 601 B 1 HETATM 26 O O21 QAM . . . E 2 -0.518 -25.112 42.715 1 95.93 ? O21 QAM 601 B 1 HETATM 27 S S22 QAM . . . E 2 -3.233 -24.241 44.707 1 79.64 ? S22 QAM 601 B 1 HETATM 28 S S28 QAM . . . E 2 -10.962 -25.078 46.708 1 79 ? S28 QAM 601 B 1 # _model_server_stats.io_time_ms 42 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 28 #