data_6UNL
#
_model_server_result.job_id            xLAEtpeAdjUJnMOTU5L0kA 
_model_server_result.datetime_utc      '2025-06-20 13:41:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6unl 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":602}' 
#
_entry.id    6UNL 
#
_exptl.entry_id    6UNL 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              605.789 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'tert-butyl [(2R)-1-(naphthalen-1-yl)-3-{[(2S)-3-(naphthalen-1-yl)-1-oxo-1-{[(pyridin-3-yl)methyl]amino}propan-2-yl]sulfanyl}propan-2-yl]carbamate' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6UNL 
_cell.length_a            76.729 
_cell.length_b            101.81 
_cell.length_c            126.859 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6UNL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
PISA tetrameric 4 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C 1 1,3 
A,B,C 2 1,2,3,4 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_455 -x-1,-y,z -1 0 0 0 -1 0 0 0 1 -76.729 0 0 
3 'crystal symmetry operation' 3_455 -x-1,y,-z -1 0 0 0 1 0 0 0 -1 -76.729 0 0 
4 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 422 A CYS 442 1_555 B FE HEM . A HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? 
metalc ? metalc2 B FE HEM . A HEM 601 1_555 C N30 QDJ . A QDJ 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? 
#
_chem_comp.formula           'C37 H39 N3 O3 S' 
_chem_comp.formula_weight    605.789 
_chem_comp.id                QDJ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'tert-butyl [(2R)-1-(naphthalen-1-yl)-3-{[(2S)-3-(naphthalen-1-yl)-1-oxo-1-{[(pyridin-3-yl)methyl]amino}propan-2-yl]sulfanyl}propan-2-yl]carbamate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C43 C42 QDJ doub 357 n y 
C43 C44 QDJ sing 358 n y 
C42 C41 QDJ sing 359 n y 
C01 C02 QDJ sing 360 n n 
C44 C35 QDJ doub 361 n y 
C03 C02 QDJ sing 362 n n 
C31 C32 QDJ doub 363 n y 
C31 N30 QDJ sing 364 n y 
C02 C04 QDJ sing 365 n n 
C02 O05 QDJ sing 366 n n 
C32 C33 QDJ sing 367 n y 
C41 C40 QDJ doub 368 n y 
C41 C36 QDJ sing 369 n y 
C35 C36 QDJ sing 370 n y 
C35 C34 QDJ sing 371 n n 
N30 C29 QDJ doub 372 n y 
C40 C39 QDJ sing 373 n y 
C36 C37 QDJ doub 374 n y 
O05 C06 QDJ sing 375 n n 
C34 C09 QDJ sing 376 n n 
C33 C28 QDJ doub 377 n y 
C06 O07 QDJ doub 378 n n 
C06 N08 QDJ sing 379 n n 
C09 N08 QDJ sing 380 n n 
C09 C10 QDJ sing 381 n n 
C29 C28 QDJ sing 382 n y 
C39 C38 QDJ doub 383 n y 
C37 C38 QDJ sing 384 n y 
C28 C27 QDJ sing 385 n n 
C10 S11 QDJ sing 386 n n 
C27 N26 QDJ sing 387 n n 
O25 C24 QDJ doub 388 n n 
N26 C24 QDJ sing 389 n n 
C24 C12 QDJ sing 390 n n 
C13 C12 QDJ sing 391 n n 
C13 C14 QDJ sing 392 n n 
S11 C12 QDJ sing 393 n n 
C23 C22 QDJ doub 394 n y 
C23 C14 QDJ sing 395 n y 
C22 C21 QDJ sing 396 n y 
C14 C15 QDJ doub 397 n y 
C21 C20 QDJ doub 398 n y 
C15 C20 QDJ sing 399 n y 
C15 C16 QDJ sing 400 n y 
C20 C19 QDJ sing 401 n y 
C16 C17 QDJ doub 402 n y 
C19 C18 QDJ doub 403 n y 
C17 C18 QDJ sing 404 n y 
C01 H1 QDJ sing 405 n n 
C01 H2 QDJ sing 406 n n 
C01 H3 QDJ sing 407 n n 
C03 H4 QDJ sing 408 n n 
C03 H5 QDJ sing 409 n n 
C03 H6 QDJ sing 410 n n 
C04 H7 QDJ sing 411 n n 
C04 H8 QDJ sing 412 n n 
C04 H9 QDJ sing 413 n n 
C09 H10 QDJ sing 414 n n 
C10 H11 QDJ sing 415 n n 
C12 H12 QDJ sing 416 n n 
C13 H13 QDJ sing 417 n n 
C13 H14 QDJ sing 418 n n 
C16 H15 QDJ sing 419 n n 
C17 H16 QDJ sing 420 n n 
C18 H17 QDJ sing 421 n n 
C19 H18 QDJ sing 422 n n 
C21 H19 QDJ sing 423 n n 
C22 H20 QDJ sing 424 n n 
C23 H21 QDJ sing 425 n n 
C27 H22 QDJ sing 426 n n 
C27 H23 QDJ sing 427 n n 
C29 H24 QDJ sing 428 n n 
C31 H25 QDJ sing 429 n n 
C32 H26 QDJ sing 430 n n 
C33 H27 QDJ sing 431 n n 
C34 H28 QDJ sing 432 n n 
C34 H29 QDJ sing 433 n n 
C37 H30 QDJ sing 434 n n 
C38 H31 QDJ sing 435 n n 
C39 H32 QDJ sing 436 n n 
C40 H33 QDJ sing 437 n n 
C42 H34 QDJ sing 438 n n 
C43 H35 QDJ sing 439 n n 
C44 H36 QDJ sing 440 n n 
N08 H37 QDJ sing 441 n n 
N26 H38 QDJ sing 442 n n 
C10 H39 QDJ sing 443 n n 
#
_atom_sites.entry_id                     6UNL 
_atom_sites.fract_transf_matrix[1][1]    0.013033 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009822 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007883 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HEM A 1 601 500 HEM HEM . 
C 3 QDJ A 1 602 700 QDJ 75W . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C01 QDJ . . . C 3 -27.321 -15.711 -11.714 1 120.38 ? C01 QDJ 602 A 1 
HETATM 2 C C02 QDJ . . . C 3 -27.277 -14.674 -10.544 1 116.68 ? C02 QDJ 602 A 1 
HETATM 3 C C03 QDJ . . . C 3 -26.857 -13.268 -11.142 1 106 ? C03 QDJ 602 A 1 
HETATM 4 C C04 QDJ . . . C 3 -28.693 -14.486 -9.956 1 114.29 ? C04 QDJ 602 A 1 
HETATM 5 C C06 QDJ . . . C 3 -26.365 -16.415 -8.811 1 136.71 ? C06 QDJ 602 A 1 
HETATM 6 C C09 QDJ . . . C 3 -23.747 -17.095 -8.762 1 124.02 ? C09 QDJ 602 A 1 
HETATM 7 C C10 QDJ . . . C 3 -22.957 -16.403 -7.545 1 129.53 ? C10 QDJ 602 A 1 
HETATM 8 C C12 QDJ . . . C 3 -22.573 -19.6 -5.769 1 119.49 ? C12 QDJ 602 A 1 
HETATM 9 C C13 QDJ . . . C 3 -24.031 -20.203 -6.145 1 117.41 ? C13 QDJ 602 A 1 
HETATM 10 C C14 QDJ . . . C 3 -25.287 -19.723 -5.35 1 121.15 ? C14 QDJ 602 A 1 
HETATM 11 C C15 QDJ . . . C 3 -25.346 -18.993 -4.019 1 125.39 ? C15 QDJ 602 A 1 
HETATM 12 C C16 QDJ . . . C 3 -24.146 -18.665 -3.273 1 126.99 ? C16 QDJ 602 A 1 
HETATM 13 C C17 QDJ . . . C 3 -24.221 -17.986 -2.027 1 129.6 ? C17 QDJ 602 A 1 
HETATM 14 C C18 QDJ . . . C 3 -25.471 -17.597 -1.49 1 125.72 ? C18 QDJ 602 A 1 
HETATM 15 C C19 QDJ . . . C 3 -26.663 -17.904 -2.195 1 122.63 ? C19 QDJ 602 A 1 
HETATM 16 C C20 QDJ . . . C 3 -26.575 -18.612 -3.464 1 125.39 ? C20 QDJ 602 A 1 
HETATM 17 C C21 QDJ . . . C 3 -27.842 -18.895 -4.13 1 127.07 ? C21 QDJ 602 A 1 
HETATM 18 C C22 QDJ . . . C 3 -27.815 -19.575 -5.379 1 128.75 ? C22 QDJ 602 A 1 
HETATM 19 C C23 QDJ . . . C 3 -26.551 -19.974 -5.964 1 127.09 ? C23 QDJ 602 A 1 
HETATM 20 C C24 QDJ . . . C 3 -21.308 -20.403 -6.215 1 106.12 ? C24 QDJ 602 A 1 
HETATM 21 C C27 QDJ . . . C 3 -19.791 -22.298 -6.706 1 85.62 ? C27 QDJ 602 A 1 
HETATM 22 C C28 QDJ . . . C 3 -19.529 -22.374 -8.208 1 58.96 ? C28 QDJ 602 A 1 
HETATM 23 C C29 QDJ . . . C 3 -18.235 -22.603 -8.707 1 58.93 ? C29 QDJ 602 A 1 
HETATM 24 C C31 QDJ . . . C 3 -18.96 -22.608 -10.93 1 74.05 ? C31 QDJ 602 A 1 
HETATM 25 C C32 QDJ . . . C 3 -20.286 -22.38 -10.53 1 65.49 ? C32 QDJ 602 A 1 
HETATM 26 C C33 QDJ . . . C 3 -20.557 -22.28 -9.155 1 54.53 ? C33 QDJ 602 A 1 
HETATM 27 C C34 QDJ . . . C 3 -23.035 -18.475 -9.285 1 113.33 ? C34 QDJ 602 A 1 
HETATM 28 C C35 QDJ . . . C 3 -21.755 -18.441 -10.208 1 113.19 ? C35 QDJ 602 A 1 
HETATM 29 C C36 QDJ . . . C 3 -20.398 -18.088 -9.721 1 101.75 ? C36 QDJ 602 A 1 
HETATM 30 C C37 QDJ . . . C 3 -20.236 -17.738 -8.371 1 99.1 ? C37 QDJ 602 A 1 
HETATM 31 C C38 QDJ . . . C 3 -18.987 -17.385 -7.821 1 84.46 ? C38 QDJ 602 A 1 
HETATM 32 C C39 QDJ . . . C 3 -17.888 -17.384 -8.646 1 74.6 ? C39 QDJ 602 A 1 
HETATM 33 C C40 QDJ . . . C 3 -18.02 -17.731 -10.005 1 82.98 ? C40 QDJ 602 A 1 
HETATM 34 C C41 QDJ . . . C 3 -19.288 -18.085 -10.523 1 87.24 ? C41 QDJ 602 A 1 
HETATM 35 C C42 QDJ . . . C 3 -19.367 -18.422 -11.934 1 96.14 ? C42 QDJ 602 A 1 
HETATM 36 C C43 QDJ . . . C 3 -20.652 -18.771 -12.447 1 110.03 ? C43 QDJ 602 A 1 
HETATM 37 C C44 QDJ . . . C 3 -21.823 -18.785 -11.59 1 111.52 ? C44 QDJ 602 A 1 
HETATM 38 N N08 QDJ . . . C 3 -25.199 -17.255 -8.371 1 132.97 ? N08 QDJ 602 A 1 
HETATM 39 N N26 QDJ . . . C 3 -21.11 -21.789 -6.296 1 100.65 ? N26 QDJ 602 A 1 
HETATM 40 N N30 QDJ . . . C 3 -17.965 -22.722 -10.02 1 64.12 ? N30 QDJ 602 A 1 
HETATM 41 O O05 QDJ . . . C 3 -26.298 -15.13 -9.457 1 127.66 ? O05 QDJ 602 A 1 
HETATM 42 O O07 QDJ . . . C 3 -27.504 -16.88 -8.604 1 141.97 ? O07 QDJ 602 A 1 
HETATM 43 O O25 QDJ . . . C 3 -20.292 -19.777 -6.48 1 101.94 ? O25 QDJ 602 A 1 
HETATM 44 S S11 QDJ . . . C 3 -22.319 -17.558 -6.034 1 131.45 ? S11 QDJ 602 A 1 
#
_model_server_stats.io_time_ms              66 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           44 
#