data_6UQE # _model_server_result.job_id zW3iRscY_TJnCUZVKtQ8_Q _model_server_result.datetime_utc '2024-10-20 19:12:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6uqe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"W","auth_seq_id":801}' # _entry.id 6UQE # _exptl.entry_id 6UQE _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 427.201 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 22-meric _pdbx_struct_assembly.oligomeric_count 22 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 W N N ? 5 X N N ? 5 EA N N ? 5 FA N N ? 5 HA N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id E _struct_conn.ptnr1_label_atom_id NH1 _struct_conn.ptnr1_label_comp_id ARG _struct_conn.ptnr1_label_seq_id 171 _struct_conn.ptnr1_auth_asym_id E _struct_conn.ptnr1_auth_comp_id ARG _struct_conn.ptnr1_auth_seq_id 339 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id FA _struct_conn.ptnr2_label_atom_id O1A _struct_conn.ptnr2_label_comp_id ADP _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id E _struct_conn.ptnr2_auth_comp_id ADP _struct_conn.ptnr2_auth_seq_id 802 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.46 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C10 H15 N5 O10 P2' _chem_comp.formula_weight 427.201 _chem_comp.id ADP _chem_comp.mon_nstd_flag n _chem_comp.name "ADENOSINE-5'-DIPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6UQE _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code W 5 ADP A 1 801 998 ADP ADP . X 5 ADP A 1 802 999 ADP ADP . Y 6 AGS B 1 801 998 AGS AGS . Z 6 AGS B 1 802 999 AGS AGS . AA 6 AGS C 1 801 998 AGS AGS . BA 6 AGS C 1 802 999 AGS AGS . CA 6 AGS D 1 801 998 AGS AGS . DA 6 AGS D 1 802 999 AGS AGS . EA 5 ADP E 1 801 998 ADP ADP . FA 5 ADP E 1 802 998 ADP ADP . GA 6 AGS E 1 803 1 AGS AGS . HA 5 ADP F 1 801 999 ADP ADP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB ADP . . . W 5 261.626 225.521 180.249 1 125.63 ? PB ADP 801 A 1 HETATM 2 O O1B ADP . . . W 5 262.35 225.718 178.941 1 125.63 ? O1B ADP 801 A 1 HETATM 3 O O2B ADP . . . W 5 262.557 225.367 181.411 1 125.63 ? O2B ADP 801 A 1 HETATM 4 O O3B ADP . . . W 5 260.858 226.806 180.528 1 125.63 ? O3B ADP 801 A 1 HETATM 5 P PA ADP . . . W 5 261.056 222.745 179.957 1 125.63 ? PA ADP 801 A 1 HETATM 6 O O1A ADP . . . W 5 259.844 222.024 179.35 1 125.63 ? O1A ADP 801 A 1 HETATM 7 O O2A ADP . . . W 5 261.271 222.052 181.301 1 125.63 ? O2A ADP 801 A 1 HETATM 8 O O3A ADP . . . W 5 260.559 224.296 180.176 1 125.63 ? O3A ADP 801 A 1 HETATM 9 O O5' ADP . . . W 5 262.336 222.498 178.937 1 125.63 ? O5' ADP 801 A 1 HETATM 10 C C5' ADP . . . W 5 262.442 221.381 178.079 1 125.63 ? C5' ADP 801 A 1 HETATM 11 C C4' ADP . . . W 5 262.569 219.989 178.828 1 125.63 ? C4' ADP 801 A 1 HETATM 12 O O4' ADP . . . W 5 262.578 218.989 177.95 1 125.63 ? O4' ADP 801 A 1 HETATM 13 C C3' ADP . . . W 5 263.897 219.77 179.698 1 125.63 ? C3' ADP 801 A 1 HETATM 14 O O3' ADP . . . W 5 264.832 220.846 179.642 1 125.63 ? O3' ADP 801 A 1 HETATM 15 C C2' ADP . . . W 5 264.489 218.48 179.074 1 125.63 ? C2' ADP 801 A 1 HETATM 16 O O2' ADP . . . W 5 265.303 217.74 179.977 1 125.63 ? O2' ADP 801 A 1 HETATM 17 C C1' ADP . . . W 5 263.424 217.766 178.601 1 125.63 ? C1' ADP 801 A 1 HETATM 18 N N9 ADP . . . W 5 262.332 216.977 179.359 1 125.63 ? N9 ADP 801 A 1 HETATM 19 C C8 ADP . . . W 5 261.707 217.319 180.494 1 125.63 ? C8 ADP 801 A 1 HETATM 20 N N7 ADP . . . W 5 260.831 216.39 180.846 1 125.63 ? N7 ADP 801 A 1 HETATM 21 C C5 ADP . . . W 5 260.86 215.4 179.96 1 125.63 ? C5 ADP 801 A 1 HETATM 22 C C6 ADP . . . W 5 260.158 214.148 179.785 1 125.63 ? C6 ADP 801 A 1 HETATM 23 N N6 ADP . . . W 5 259.19 213.712 180.736 1 125.63 ? N6 ADP 801 A 1 HETATM 24 N N1 ADP . . . W 5 260.436 213.342 178.746 1 125.63 ? N1 ADP 801 A 1 HETATM 25 C C2 ADP . . . W 5 261.384 213.723 177.81 1 125.63 ? C2 ADP 801 A 1 HETATM 26 N N3 ADP . . . W 5 262.065 214.901 177.932 1 125.63 ? N3 ADP 801 A 1 HETATM 27 C C4 ADP . . . W 5 261.834 215.766 178.996 1 125.63 ? C4 ADP 801 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 68 _model_server_stats.query_time_ms 256 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 27 #