data_6US6
#
_model_server_result.job_id            pL0kpRb10chPEZEHxfVvsA 
_model_server_result.datetime_utc      '2025-06-24 06:51:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6us6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":201}' 
#
_entry.id    6US6 
#
_exptl.entry_id    6US6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              524.46 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            {N-(2-{bis[(pyridin-2-yl-kappaN)methyl]amino-kappaN}ethyl)-5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanamide}iron(3+) 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6US6 
_cell.length_a            58.117 
_cell.length_b            58.117 
_cell.length_c            185.667 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6US6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        98 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 41 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z 0 -1 0 -1 0 0 0 0 -1 58.117 58.117 0 
3 'crystal symmetry operation' 10_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 58.117 58.117 0 
4 'crystal symmetry operation' 15_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE1 GLU 112 A GLU 112 1_555 B FE1 QFY . A QFY 201 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.195 ? 
metalc ? metalc2 B FE1 QFY . A QFY 201 1_555 C OXT ACT . A ACT 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? 
metalc ? metalc3 B FE1 QFY . A QFY 201 1_555 D OXT ACT . A ACT 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? 
#
_chem_comp.formula           'C24 H32 Fe N6 O2 S 3' 
_chem_comp.formula_weight    524.46 
_chem_comp.id                QFY 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              {N-(2-{bis[(pyridin-2-yl-kappaN)methyl]amino-kappaN}ethyl)-5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanamide}iron(3+) 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C21 C22 QFY doub 270 n y 
C21 C20 QFY sing 271 n y 
C22 N5 QFY sing 272 n y 
C20 C19 QFY doub 273 n y 
N5 FE1 QFY sing 274 n n 
N5 C18 QFY doub 275 n y 
FE1 N3 QFY sing 276 n n 
FE1 N4 QFY sing 277 n n 
C19 C18 QFY sing 278 n y 
C18 C17 QFY sing 279 n n 
O1 C1 QFY doub 280 n n 
C24 C23 QFY sing 281 n n 
C24 N6 QFY sing 282 n n 
N3 C17 QFY sing 283 n n 
N3 C23 QFY sing 284 n n 
N3 C11 QFY sing 285 n n 
C16 N4 QFY doub 286 n y 
C16 C15 QFY sing 287 n y 
N4 C12 QFY sing 288 n y 
C1 N6 QFY sing 289 n n 
C1 C2 QFY sing 290 n n 
C2 C3 QFY sing 291 n n 
C15 C14 QFY doub 292 n y 
C11 C12 QFY sing 293 n n 
C12 C13 QFY doub 294 n y 
C3 C4 QFY sing 295 n n 
C14 C13 QFY sing 296 n y 
C4 C5 QFY sing 297 n n 
C5 C6 QFY sing 298 n n 
C6 C10 QFY sing 299 n n 
C6 S1 QFY sing 300 n n 
C10 N2 QFY sing 301 n n 
C10 C8 QFY sing 302 n n 
N2 C9 QFY sing 303 n n 
S1 C7 QFY sing 304 n n 
C9 O2 QFY doub 305 n n 
C9 N1 QFY sing 306 n n 
C8 C7 QFY sing 307 n n 
C8 N1 QFY sing 308 n n 
C10 H1 QFY sing 309 n n 
C15 H2 QFY sing 310 n n 
C17 H3 QFY sing 311 n n 
C17 H4 QFY sing 312 n n 
C11 H5 QFY sing 313 n n 
C11 H6 QFY sing 314 n n 
C14 H7 QFY sing 315 n n 
N1 H8 QFY sing 316 n n 
N2 H9 QFY sing 317 n n 
C8 H10 QFY sing 318 n n 
C7 H11 QFY sing 319 n n 
C7 H12 QFY sing 320 n n 
C6 H13 QFY sing 321 n n 
C5 H14 QFY sing 322 n n 
C5 H15 QFY sing 323 n n 
C4 H16 QFY sing 324 n n 
C4 H17 QFY sing 325 n n 
C3 H18 QFY sing 326 n n 
C3 H19 QFY sing 327 n n 
C2 H20 QFY sing 328 n n 
C2 H21 QFY sing 329 n n 
C24 H22 QFY sing 330 n n 
C24 H23 QFY sing 331 n n 
N6 H24 QFY sing 332 n n 
C23 H25 QFY sing 333 n n 
C23 H26 QFY sing 334 n n 
C16 H27 QFY sing 335 n n 
C13 H28 QFY sing 336 n n 
C22 H29 QFY sing 337 n n 
C21 H30 QFY sing 338 n n 
C20 H31 QFY sing 339 n n 
C19 H32 QFY sing 340 n n 
#
_atom_sites.entry_id                     6US6 
_atom_sites.fract_transf_matrix[1][1]    0.017207 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017207 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005386 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 QFY A 1 201 1 QFY KM2 . 
C 3 ACT A 1 202 1 ACT ACT . 
D 3 ACT A 1 203 2 ACT ACT . 
E 3 ACT A 1 204 3 ACT ACT . 
F 4 HOH A 1 301 74 HOH HOH . 
F 4 HOH A 2 302 27 HOH HOH . 
F 4 HOH A 3 303 3 HOH HOH . 
F 4 HOH A 4 304 54 HOH HOH . 
F 4 HOH A 5 305 19 HOH HOH . 
F 4 HOH A 6 306 29 HOH HOH . 
F 4 HOH A 7 307 14 HOH HOH . 
F 4 HOH A 8 308 72 HOH HOH . 
F 4 HOH A 9 309 6 HOH HOH . 
F 4 HOH A 10 310 18 HOH HOH . 
F 4 HOH A 11 311 7 HOH HOH . 
F 4 HOH A 12 312 40 HOH HOH . 
F 4 HOH A 13 313 15 HOH HOH . 
F 4 HOH A 14 314 2 HOH HOH . 
F 4 HOH A 15 315 65 HOH HOH . 
F 4 HOH A 16 316 62 HOH HOH . 
F 4 HOH A 17 317 4 HOH HOH . 
F 4 HOH A 18 318 5 HOH HOH . 
F 4 HOH A 19 319 43 HOH HOH . 
F 4 HOH A 20 320 31 HOH HOH . 
F 4 HOH A 21 321 55 HOH HOH . 
F 4 HOH A 22 322 10 HOH HOH . 
F 4 HOH A 23 323 34 HOH HOH . 
F 4 HOH A 24 324 13 HOH HOH . 
F 4 HOH A 25 325 71 HOH HOH . 
F 4 HOH A 26 326 38 HOH HOH . 
F 4 HOH A 27 327 33 HOH HOH . 
F 4 HOH A 28 328 66 HOH HOH . 
F 4 HOH A 29 329 26 HOH HOH . 
F 4 HOH A 30 330 1 HOH HOH . 
F 4 HOH A 31 331 28 HOH HOH . 
F 4 HOH A 32 332 22 HOH HOH . 
F 4 HOH A 33 333 42 HOH HOH . 
F 4 HOH A 34 334 8 HOH HOH . 
F 4 HOH A 35 335 21 HOH HOH . 
F 4 HOH A 36 336 24 HOH HOH . 
F 4 HOH A 37 337 60 HOH HOH . 
F 4 HOH A 38 338 11 HOH HOH . 
F 4 HOH A 39 339 30 HOH HOH . 
F 4 HOH A 40 340 53 HOH HOH . 
F 4 HOH A 41 341 12 HOH HOH . 
F 4 HOH A 42 342 9 HOH HOH . 
F 4 HOH A 43 343 39 HOH HOH . 
F 4 HOH A 44 344 23 HOH HOH . 
F 4 HOH A 45 345 61 HOH HOH . 
F 4 HOH A 46 346 46 HOH HOH . 
F 4 HOH A 47 347 25 HOH HOH . 
F 4 HOH A 48 348 17 HOH HOH . 
F 4 HOH A 49 349 32 HOH HOH . 
F 4 HOH A 50 350 51 HOH HOH . 
F 4 HOH A 51 351 20 HOH HOH . 
F 4 HOH A 52 352 45 HOH HOH . 
F 4 HOH A 53 353 47 HOH HOH . 
F 4 HOH A 54 354 16 HOH HOH . 
F 4 HOH A 55 355 37 HOH HOH . 
F 4 HOH A 56 356 48 HOH HOH . 
F 4 HOH A 57 357 52 HOH HOH . 
F 4 HOH A 58 358 50 HOH HOH . 
F 4 HOH A 59 359 56 HOH HOH . 
F 4 HOH A 60 360 36 HOH HOH . 
F 4 HOH A 61 361 73 HOH HOH . 
F 4 HOH A 62 362 70 HOH HOH . 
F 4 HOH A 63 363 49 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 QFY . . . B 2 17.634 29.318 -9.672 1 13.67 ? C10 QFY 201 A 1 
HETATM 2 C C15 QFY . . . B 2 28.741 25.874 -13.501 1 33.3 ? C15 QFY 201 A 1 
HETATM 3 C C17 QFY . . . B 2 24.28 27.61 -14.72 1 34.85 ? C17 QFY 201 A 1 
HETATM 4 C C11 QFY . . . B 2 24.535 25.341 -13.808 1 37.45 ? C11 QFY 201 A 1 
HETATM 5 C C12 QFY . . . B 2 26.002 25.506 -13.53 1 29.61 ? C12 QFY 201 A 1 
HETATM 6 C C14 QFY . . . B 2 28.096 25.673 -12.284 1 29.37 ? C14 QFY 201 A 1 
HETATM 7 O O2 QFY . . . B 2 14.373 29.615 -8.27 1 14.82 ? O2 QFY 201 A 1 
HETATM 8 C C9 QFY . . . B 2 15.608 29.527 -8.5 1 14.42 ? C9 QFY 201 A 1 
HETATM 9 N N1 QFY . . . B 2 16.563 29.707 -7.546 1 14.68 ? N1 QFY 201 A 1 
HETATM 10 N N2 QFY . . . B 2 16.153 29.361 -9.742 1 13.95 ? N2 QFY 201 A 1 
HETATM 11 C C8 QFY . . . B 2 17.932 29.644 -8.141 1 13.35 ? C8 QFY 201 A 1 
HETATM 12 C C7 QFY . . . B 2 18.678 28.351 -7.641 1 14.91 ? C7 QFY 201 A 1 
HETATM 13 S S1 QFY . . . B 2 18.092 26.973 -8.627 1 14.56 ? S1 QFY 201 A 1 
HETATM 14 C C6 QFY . . . B 2 18.268 28.012 -10.103 1 14.25 ? C6 QFY 201 A 1 
HETATM 15 C C5 QFY . . . B 2 17.619 27.394 -11.367 1 15.5 ? C5 QFY 201 A 1 
HETATM 16 C C4 QFY . . . B 2 18.465 26.287 -11.944 1 14.14 ? C4 QFY 201 A 1 
HETATM 17 C C3 QFY . . . B 2 17.82 25.619 -13.162 1 15.35 ? C3 QFY 201 A 1 
HETATM 18 C C2 QFY . . . B 2 18.632 24.416 -13.687 1 15.43 ? C2 QFY 201 A 1 
HETATM 19 C C1 QFY . . . B 2 19.856 24.993 -14.414 1 16.74 ? C1 QFY 201 A 1 
HETATM 20 C C24 QFY . . . B 2 22.217 24.549 -15.055 1 18.88 ? C24 QFY 201 A 1 
HETATM 21 O O1 QFY . . . B 2 19.851 26.04 -15.085 1 17.79 ? O1 QFY 201 A 1 
HETATM 22 N N6 QFY . . . B 2 21.02 24.293 -14.262 1 17.27 ? N6 QFY 201 A 1 
HETATM 23 C C23 QFY . . . B 2 22.595 25.979 -14.68 1 27.02 ? C23 QFY 201 A 1 
HETATM 24 N N3 QFY . . . B 2 23.989 26.187 -14.969 1 26.13 ? N3 QFY 201 A 1 
HETATM 25 FE FE1 QFY . . . B 2 25.376 25.524 -16.445 0.8 29.39 ? FE1 QFY 201 A 1 
HETATM 26 N N4 QFY . . . B 2 26.658 25.711 -14.632 1 29.58 ? N4 QFY 201 A 1 
HETATM 27 C C16 QFY . . . B 2 27.992 25.855 -14.701 1 37.47 ? C16 QFY 201 A 1 
HETATM 28 C C13 QFY . . . B 2 26.711 25.444 -12.25 1 28.97 ? C13 QFY 201 A 1 
HETATM 29 N N5 QFY . . . B 2 24.771 27.682 -17.118 1 51.59 ? N5 QFY 201 A 1 
HETATM 30 C C18 QFY . . . B 2 24.286 28.331 -16.021 1 44.17 ? C18 QFY 201 A 1 
HETATM 31 C C22 QFY . . . B 2 24.816 28.29 -18.353 1 58.38 ? C22 QFY 201 A 1 
HETATM 32 C C21 QFY . . . B 2 24.35 29.639 -18.486 1 58.99 ? C21 QFY 201 A 1 
HETATM 33 C C20 QFY . . . B 2 23.832 30.333 -17.343 1 59.51 ? C20 QFY 201 A 1 
HETATM 34 C C19 QFY . . . B 2 23.789 29.671 -16.087 1 43.9 ? C19 QFY 201 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           32 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           589 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           34 
#